Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 AC092667.1-201ENST00000434301 2586 ntBASIC19.5■□□□□ 0.71
KRT78Q8N1N4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 AC010980.2-201ENST00000587099 1412 ntBASIC19.5■□□□□ 0.71
KRT78Q8N1N4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT78Q8N1N4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 MIR663A-201ENST00000385250 93 ntBASIC19.49■□□□□ 0.71
KRT78Q8N1N4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT78Q8N1N4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 AF201337.1-201ENST00000520239 748 ntBASIC19.48■□□□□ 0.71
KRT78Q8N1N4 RAP2CP1-201ENST00000605103 478 ntBASIC19.48■□□□□ 0.71
KRT78Q8N1N4 AC105020.6-201ENST00000621523 1217 ntBASIC19.48■□□□□ 0.71
KRT78Q8N1N4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT78Q8N1N4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 AC006970.2-201ENST00000450065 779 ntBASIC19.47■□□□□ 0.71
KRT78Q8N1N4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 AC105036.2-201ENST00000569468 176 ntBASIC19.47■□□□□ 0.71
KRT78Q8N1N4 AL589743.5-201ENST00000616611 1050 ntBASIC19.47■□□□□ 0.71
KRT78Q8N1N4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KRT78Q8N1N4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 AC093787.1-201ENST00000450396 207 ntBASIC19.46■□□□□ 0.71
KRT78Q8N1N4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms