Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 RTT10YPL183C 3042 nt2.67□□□□□ -1.98
SSL1Q04673 KEL2YGR238C 2649 nt2.67□□□□□ -1.98
SSL1Q04673 VPS16YPL045W 2397 nt2.66□□□□□ -1.98
SSL1Q04673 NFT1YKR103W 3657 nt2.66□□□□□ -1.98
SSL1Q04673 ESC1YMR219W 4977 nt2.66□□□□□ -1.98
SSL1Q04673 UPS1YLR193C 528 nt2.66□□□□□ -1.98
SSL1Q04673 CSE2YNR010W 450 nt2.66□□□□□ -1.98
SSL1Q04673 RGA2YDR379W 3030 nt2.66□□□□□ -1.98
SSL1Q04673 CFT2YLR115W 2580 nt2.66□□□□□ -1.98
SSL1Q04673 TAE2YPL009C 3117 nt2.66□□□□□ -1.98
SSL1Q04673 YLR278CYLR278C 4026 nt2.65□□□□□ -1.98
SSL1Q04673 ATP8Q0080 147 nt2.65□□□□□ -1.99
SSL1Q04673 YOR302WYOR302W 78 nt2.65□□□□□ -1.99
SSL1Q04673 snR43snR43 209 nt2.65□□□□□ -1.99
SSL1Q04673 YIL080WYIL080W 4722 nt2.65□□□□□ -1.99
SSL1Q04673 tF(GAA)QtF(GAA)Q 75 nt2.64□□□□□ -1.99
SSL1Q04673 VPS55YJR044C 423 nt2.64□□□□□ -1.99
SSL1Q04673 YLR120W-AYLR120W-A 102 nt2.64□□□□□ -1.99
SSL1Q04673 YLR342W-AYLR342W-A 174 nt2.64□□□□□ -1.99
SSL1Q04673 YPL150WYPL150W 2706 nt2.64□□□□□ -1.99
SSL1Q04673 YDR239CYDR239C 2364 nt2.64□□□□□ -1.99
SSL1Q04673 SGS1YMR190C 4344 nt2.64□□□□□ -1.99
SSL1Q04673 PEP3YLR148W 2757 nt2.63□□□□□ -1.99
SSL1Q04673 YEL014CYEL014C 306 nt2.63□□□□□ -1.99
SSL1Q04673 YIL174WYIL174W 228 nt2.63□□□□□ -1.99
SSL1Q04673 YJL222W-AYJL222W-A 228 nt2.63□□□□□ -1.99
SSL1Q04673 YLR146W-AYLR146W-A 189 nt2.63□□□□□ -1.99
SSL1Q04673 VIK1YPL253C 1944 nt2.63□□□□□ -1.99
SSL1Q04673 CRM1YGR218W 3255 nt2.63□□□□□ -1.99
SSL1Q04673 SAP1YER047C 2694 nt2.63□□□□□ -1.99
SSL1Q04673 AFI1YOR129C 2682 nt2.63□□□□□ -1.99
SSL1Q04673 YLR149CYLR149C 2193 nt2.63□□□□□ -1.99
SSL1Q04673 AXL1YPR122W 3627 nt2.62□□□□□ -1.99
SSL1Q04673 RPS22AYJL190C 393 nt2.62□□□□□ -1.99
SSL1Q04673 YMR321CYMR321C 318 nt2.62□□□□□ -1.99
SSL1Q04673 YNL338WYNL338W 159 nt2.62□□□□□ -1.99
SSL1Q04673 ESL1YIL151C 3357 nt2.62□□□□□ -1.99
SSL1Q04673 VPS34YLR240W 2628 nt2.62□□□□□ -1.99
SSL1Q04673 INP53YOR109W 3324 nt2.62□□□□□ -1.99
SSL1Q04673 NOP53YPL146C 1368 nt2.61□□□□□ -1.99
SSL1Q04673 RPO41YFL036W 4056 nt2.61□□□□□ -1.99
SSL1Q04673 GRR1YJR090C 3456 nt2.61□□□□□ -1.99
SSL1Q04673 ACB1YGR037C 264 nt2.61□□□□□ -1.99
SSL1Q04673 SWI6YLR182W 2412 nt2.6□□□□□ -1.99
SSL1Q04673 SCH9YHR205W 2475 nt2.6□□□□□ -1.99
SSL1Q04673 CDC27YBL084C 2277 nt2.6□□□□□ -1.99
SSL1Q04673 RRT15YLR162W-A 189 nt2.6□□□□□ -1.99
SSL1Q04673 ACM1YPL267W 630 nt2.6□□□□□ -1.99
SSL1Q04673 ISW1YBR245C 3390 nt2.6□□□□□ -1.99
SSL1Q04673 MUK1YPL070W 1839 nt2.6□□□□□ -1.99
SSL1Q04673 PDR3YBL005W 2931 nt2.6□□□□□ -1.99
SSL1Q04673 TOP2YNL088W 4287 nt2.6□□□□□ -1.99
SSL1Q04673 SRB8YCR081W 4284 nt2.59□□□□□ -1.99
SSL1Q04673 RRP6YOR001W 2202 nt2.59□□□□□ -1.99
SSL1Q04673 YDR286CYDR286C 345 nt2.59□□□□□ -1.99
SSL1Q04673 YBR277CYBR277C 402 nt2.59□□□□□ -1.99
SSL1Q04673 INP2YMR163C 2118 nt2.59□□□□□ -2
SSL1Q04673 ESL2YKR096W 3588 nt2.59□□□□□ -2
SSL1Q04673 INP52YNL106C 3552 nt2.59□□□□□ -2
SSL1Q04673 SEC26YDR238C 2922 nt2.58□□□□□ -2
SSL1Q04673 MNL2YLR057W 2550 nt2.58□□□□□ -2
SSL1Q04673 YKU80YMR106C 1890 nt2.58□□□□□ -2
SSL1Q04673 PLC1YPL268W 2610 nt2.58□□□□□ -2
SSL1Q04673 PDE2YOR360C 1581 nt2.58□□□□□ -2
SSL1Q04673 SSS1YDR086C 243 nt2.58□□□□□ -2
SSL1Q04673 PNC1YGL037C 651 nt2.58□□□□□ -2
SSL1Q04673 OLI1Q0130 231 nt2.58□□□□□ -2
SSL1Q04673 tW(CCA)G1tW(CCA)G1 72 nt2.58□□□□□ -2
SSL1Q04673 tW(CCA)G2tW(CCA)G2 72 nt2.58□□□□□ -2
SSL1Q04673 tW(CCA)JtW(CCA)J 72 nt2.58□□□□□ -2
SSL1Q04673 tW(CCA)KtW(CCA)K 72 nt2.58□□□□□ -2
SSL1Q04673 tW(CCA)MtW(CCA)M 72 nt2.58□□□□□ -2
SSL1Q04673 tW(CCA)PtW(CCA)P 72 nt2.58□□□□□ -2
SSL1Q04673 MDM20YOL076W 2391 nt2.58□□□□□ -2
SSL1Q04673 YAL042C-AYAL042C-A 378 nt2.57□□□□□ -2
SSL1Q04673 YOR015WYOR015W 360 nt2.57□□□□□ -2
SSL1Q04673 YOR170WYOR170W 306 nt2.57□□□□□ -2
SSL1Q04673 SPT21YMR179W 2277 nt2.57□□□□□ -2
SSL1Q04673 TRS65YGR166W 1683 nt2.57□□□□□ -2
SSL1Q04673 PXA2YKL188C 2562 nt2.56□□□□□ -2
SSL1Q04673 SSQ1YLR369W 1974 nt2.56□□□□□ -2
SSL1Q04673 HSC82YMR186W 2118 nt2.56□□□□□ -2
SSL1Q04673 SMY2YBR172C 2223 nt2.56□□□□□ -2
SSL1Q04673 YDL007C-AYDL007C-A 258 nt2.56□□□□□ -2
SSL1Q04673 GIS1YDR096W 2685 nt2.56□□□□□ -2
SSL1Q04673 YRB1YDR002W 606 nt2.55□□□□□ -2
SSL1Q04673 HYP2YEL034W 474 nt2.55□□□□□ -2
SSL1Q04673 YEL043WYEL043W 2871 nt2.55□□□□□ -2
SSL1Q04673 YER088C-AYER088C-A 324 nt2.55□□□□□ -2
SSL1Q04673 YJL150WYJL150W 303 nt2.55□□□□□ -2
SSL1Q04673 EMC6YLL014W 327 nt2.55□□□□□ -2
SSL1Q04673 LCL1YPL056C 306 nt2.55□□□□□ -2
SSL1Q04673 MMS1YPR164W 4224 nt2.55□□□□□ -2
SSL1Q04673 YBT1YLL048C 4986 nt2.55□□□□□ -2
SSL1Q04673 NUP100YKL068W 2880 nt2.55□□□□□ -2
SSL1Q04673 SLY1YDR189W 2001 nt2.54□□□□□ -2
SSL1Q04673 PSD2YGR170W 3417 nt2.54□□□□□ -2
SSL1Q04673 PFF1YBR074W 2931 nt2.54□□□□□ -2
SSL1Q04673 NUM1YDR150W 8247 nt2.54□□□□□ -2
SSL1Q04673 SNC1YAL030W 354 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 60.4 ms