Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 YOR333CYOR333C 417 nt1.89□□□□□ -2.11
SHO1P40073 SEF1YBL066C 3447 nt1.89□□□□□ -2.11
SHO1P40073 SCH9YHR205W 2475 nt1.88□□□□□ -2.11
SHO1P40073 BRP1YGL007W 378 nt1.88□□□□□ -2.11
SHO1P40073 HOP2YGL033W 657 nt1.88□□□□□ -2.11
SHO1P40073 MAM33YIL070C 801 nt1.88□□□□□ -2.11
SHO1P40073 RPS27AYKL156W 249 nt1.88□□□□□ -2.11
SHO1P40073 YOR072W-AYOR072W-A 249 nt1.88□□□□□ -2.11
SHO1P40073 COS111YBR203W 2775 nt1.88□□□□□ -2.11
SHO1P40073 SMY1YKL079W 1971 nt1.88□□□□□ -2.11
SHO1P40073 YBR184WYBR184W 1572 nt1.88□□□□□ -2.11
SHO1P40073 PAC1YOR269W 1485 nt1.88□□□□□ -2.11
SHO1P40073 IST2YBR086C 2841 nt1.87□□□□□ -2.11
SHO1P40073 BRE1YDL074C 2103 nt1.87□□□□□ -2.11
SHO1P40073 VPS8YAL002W 3825 nt1.87□□□□□ -2.11
SHO1P40073 YBL083CYBL083C 426 nt1.87□□□□□ -2.11
SHO1P40073 YCL023CYCL023C 348 nt1.87□□□□□ -2.11
SHO1P40073 SET2YJL168C 2202 nt1.87□□□□□ -2.11
SHO1P40073 SGO1YOR073W 1773 nt1.87□□□□□ -2.11
SHO1P40073 RKM1YPL208W 1752 nt1.87□□□□□ -2.11
SHO1P40073 GUP1YGL084C 1683 nt1.86□□□□□ -2.11
SHO1P40073 MNL2YLR057W 2550 nt1.86□□□□□ -2.11
SHO1P40073 CSN9YDR179C 489 nt1.86□□□□□ -2.11
SHO1P40073 YFL032WYFL032W 321 nt1.86□□□□□ -2.11
SHO1P40073 EMP24YGL200C 612 nt1.86□□□□□ -2.11
SHO1P40073 YKR075W-AYKR075W-A 270 nt1.86□□□□□ -2.11
SHO1P40073 snR36snR36 182 nt1.86□□□□□ -2.11
SHO1P40073 IRC8YJL051W 2469 nt1.86□□□□□ -2.11
SHO1P40073 MNE1YOR350C 1992 nt1.86□□□□□ -2.11
SHO1P40073 RTT101YJL047C 2529 nt1.85□□□□□ -2.11
SHO1P40073 SSQ1YLR369W 1974 nt1.85□□□□□ -2.11
SHO1P40073 YDR008CYDR008C 351 nt1.85□□□□□ -2.11
SHO1P40073 YER181CYER181C 324 nt1.85□□□□□ -2.11
SHO1P40073 YHR007C-AYHR007C-A 216 nt1.85□□□□□ -2.11
SHO1P40073 YML099W-AYML099W-A 330 nt1.85□□□□□ -2.11
SHO1P40073 YMR031W-AYMR031W-A 327 nt1.85□□□□□ -2.11
SHO1P40073 DFG16YOR030W 1860 nt1.84□□□□□ -2.11
SHO1P40073 RGA1YOR127W 3024 nt1.84□□□□□ -2.11
SHO1P40073 PRE4YFR050C 801 nt1.84□□□□□ -2.11
SHO1P40073 PUT3YKL015W 2940 nt1.84□□□□□ -2.11
SHO1P40073 SNF5YBR289W 2718 nt1.84□□□□□ -2.12
SHO1P40073 RTT107YHR154W 3213 nt1.84□□□□□ -2.12
SHO1P40073 CDC60YPL160W 3273 nt1.84□□□□□ -2.12
SHO1P40073 MMS22YLR320W 4365 nt1.83□□□□□ -2.12
SHO1P40073 RPL35AYDL191W 363 nt1.83□□□□□ -2.12
SHO1P40073 YHL041WYHL041W 450 nt1.83□□□□□ -2.12
SHO1P40073 YOR231C-AYOR231C-A 201 nt1.83□□□□□ -2.12
SHO1P40073 MF(ALPHA)1YPL187W 498 nt1.83□□□□□ -2.12
SHO1P40073 YOR343W-BYOR343W-B 5313 nt1.83□□□□□ -2.12
SHO1P40073 SLM1YIL105C 2061 nt1.82□□□□□ -2.12
SHO1P40073 PEX8YGR077C 1770 nt1.82□□□□□ -2.12
SHO1P40073 YDR183C-AYDR183C-A 258 nt1.82□□□□□ -2.12
SHO1P40073 RPL42BYHR141C 321 nt1.82□□□□□ -2.12
SHO1P40073 YIL059CYIL059C 366 nt1.82□□□□□ -2.12
SHO1P40073 YIL115W-AYIL115W-A 372 nt1.82□□□□□ -2.12
SHO1P40073 YLR053CYLR053C 327 nt1.82□□□□□ -2.12
SHO1P40073 YNL114CYNL114C 372 nt1.82□□□□□ -2.12
SHO1P40073 RPL42AYNL162W 321 nt1.82□□□□□ -2.12
SHO1P40073 IRR1YIL026C 3453 nt1.82□□□□□ -2.12
SHO1P40073 GCN2YDR283C 4980 nt1.81□□□□□ -2.12
SHO1P40073 YCR043CYCR043C 384 nt1.81□□□□□ -2.12
SHO1P40073 HHT1YBR010W 411 nt1.81□□□□□ -2.12
SHO1P40073 SAR1YPL218W 573 nt1.81□□□□□ -2.12
SHO1P40073 YDR341CYDR341C 1824 nt1.81□□□□□ -2.12
SHO1P40073 OSH6YKR003W 1347 nt1.81□□□□□ -2.12
SHO1P40073 SPP41YDR464W 4308 nt1.81□□□□□ -2.12
SHO1P40073 VPS34YLR240W 2628 nt1.81□□□□□ -2.12
SHO1P40073 UFD4YKL010C 4452 nt1.8□□□□□ -2.12
SHO1P40073 YDL062WYDL062W 426 nt1.8□□□□□ -2.12
SHO1P40073 YDR169C-AYDR169C-A 150 nt1.8□□□□□ -2.12
SHO1P40073 RPL37BYDR500C 267 nt1.8□□□□□ -2.12
SHO1P40073 YHR071C-AYHR071C-A 321 nt1.8□□□□□ -2.12
SHO1P40073 RPL39YJL189W 156 nt1.8□□□□□ -2.12
SHO1P40073 UBR2YLR024C 5619 nt1.8□□□□□ -2.12
SHO1P40073 STE5YDR103W 2754 nt1.8□□□□□ -2.12
SHO1P40073 ZRG8YER033C 3231 nt1.79□□□□□ -2.12
SHO1P40073 GRR1YJR090C 3456 nt1.79□□□□□ -2.12
SHO1P40073 GYP5YPL249C 2685 nt1.79□□□□□ -2.12
SHO1P40073 snR65snR65 100 nt1.79□□□□□ -2.12
SHO1P40073 DGR1YNL130C-A 147 nt1.79□□□□□ -2.12
SHO1P40073 NOP53YPL146C 1368 nt1.79□□□□□ -2.12
SHO1P40073 PXA2YKL188C 2562 nt1.79□□□□□ -2.12
SHO1P40073 SYH1YPL105C 2550 nt1.79□□□□□ -2.12
SHO1P40073 YOR093CYOR093C 4947 nt1.79□□□□□ -2.12
SHO1P40073 UBP1YDL122W 2430 nt1.78□□□□□ -2.12
SHO1P40073 YFL063WYFL063W 456 nt1.78□□□□□ -2.12
SHO1P40073 YKL183C-AYKL183C-A 213 nt1.78□□□□□ -2.12
SHO1P40073 TAR1YLR154W-C 375 nt1.78□□□□□ -2.12
SHO1P40073 FMP23YBR047W 528 nt1.78□□□□□ -2.12
SHO1P40073 YFR016CYFR016C 3702 nt1.78□□□□□ -2.12
SHO1P40073 CAT2YML042W 2013 nt1.78□□□□□ -2.13
SHO1P40073 YLR146W-AYLR146W-A 189 nt1.77□□□□□ -2.13
SHO1P40073 YPR010C-AYPR010C-A 219 nt1.77□□□□□ -2.13
SHO1P40073 NUT2YPR168W 474 nt1.77□□□□□ -2.13
SHO1P40073 PLC1YPL268W 2610 nt1.77□□□□□ -2.13
SHO1P40073 HER1YOR227W 3741 nt1.77□□□□□ -2.13
SHO1P40073 NAM7YMR080C 2916 nt1.77□□□□□ -2.13
SHO1P40073 PDR8YLR266C 2106 nt1.76□□□□□ -2.13
SHO1P40073 TUS1YLR425W 3924 nt1.76□□□□□ -2.13
SHO1P40073 YER172C-AYER172C-A 381 nt1.76□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 87.5 ms