Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 snR13snR13 124 nt1.72□□□□□ -2.13
DDC1Q08949 EGD1YPL037C 474 nt1.72□□□□□ -2.13
DDC1Q08949 PRM3YPL192C 402 nt1.72□□□□□ -2.13
DDC1Q08949 BPH1YCR032W 6504 nt1.72□□□□□ -2.13
DDC1Q08949 YDR341CYDR341C 1824 nt1.72□□□□□ -2.13
DDC1Q08949 RTP1YMR185W 2946 nt1.72□□□□□ -2.13
DDC1Q08949 YLR035C-AYLR035C-A 3468 nt1.72□□□□□ -2.13
DDC1Q08949 IRC20YLR247C 4671 nt1.71□□□□□ -2.14
DDC1Q08949 RBK1YCR036W 1002 nt1.71□□□□□ -2.14
DDC1Q08949 RPL37BYDR500C 267 nt1.71□□□□□ -2.14
DDC1Q08949 HUR1YGL168W 333 nt1.71□□□□□ -2.14
DDC1Q08949 SEC22YLR268W 645 nt1.71□□□□□ -2.14
DDC1Q08949 RRT1YBL048W 312 nt1.71□□□□□ -2.14
DDC1Q08949 YMR247W-AYMR247W-A 144 nt1.71□□□□□ -2.14
DDC1Q08949 CHC1YGL206C 4962 nt1.71□□□□□ -2.14
DDC1Q08949 DNF3YMR162C 4971 nt1.71□□□□□ -2.14
DDC1Q08949 RIC1YLR039C 3171 nt1.71□□□□□ -2.14
DDC1Q08949 HSH155YMR288W 2916 nt1.7□□□□□ -2.14
DDC1Q08949 CDC27YBL084C 2277 nt1.7□□□□□ -2.14
DDC1Q08949 VMR1YHL035C 4779 nt1.7□□□□□ -2.14
DDC1Q08949 SYH1YPL105C 2550 nt1.7□□□□□ -2.14
DDC1Q08949 STB4YMR019W 2850 nt1.7□□□□□ -2.14
DDC1Q08949 PKH3YDR466W 2697 nt1.7□□□□□ -2.14
DDC1Q08949 YFL019CYFL019C 354 nt1.7□□□□□ -2.14
DDC1Q08949 YKL202WYKL202W 582 nt1.7□□□□□ -2.14
DDC1Q08949 CAT2YML042W 2013 nt1.7□□□□□ -2.14
DDC1Q08949 YML084WYML084W 309 nt1.7□□□□□ -2.14
DDC1Q08949 YNL324WYNL324W 396 nt1.7□□□□□ -2.14
DDC1Q08949 GRR1YJR090C 3456 nt1.69□□□□□ -2.14
DDC1Q08949 YDL062WYDL062W 426 nt1.69□□□□□ -2.14
DDC1Q08949 YER006C-AYER006C-A 318 nt1.69□□□□□ -2.14
DDC1Q08949 YHR214W-AYHR214W-A 486 nt1.69□□□□□ -2.14
DDC1Q08949 YAR068WYAR068W 486 nt1.69□□□□□ -2.14
DDC1Q08949 YLR406C-AYLR406C-A 150 nt1.69□□□□□ -2.14
DDC1Q08949 YBR032WYBR032W 303 nt1.69□□□□□ -2.14
DDC1Q08949 SFB2YNL049C 2631 nt1.69□□□□□ -2.14
DDC1Q08949 YDR114CYDR114C 303 nt1.68□□□□□ -2.14
DDC1Q08949 YER135CYER135C 393 nt1.68□□□□□ -2.14
DDC1Q08949 YGL069CYGL069C 465 nt1.68□□□□□ -2.14
DDC1Q08949 LSO2YGR169C-A 279 nt1.68□□□□□ -2.14
DDC1Q08949 HSK3YKL138C-A 210 nt1.68□□□□□ -2.14
DDC1Q08949 YOR394C-AYOR394C-A 168 nt1.68□□□□□ -2.14
DDC1Q08949 SAR1YPL218W 573 nt1.68□□□□□ -2.14
DDC1Q08949 SBE22YHR103W 2559 nt1.68□□□□□ -2.14
DDC1Q08949 NUP192YJL039C 5052 nt1.68□□□□□ -2.14
DDC1Q08949 KAR3YPR141C 2190 nt1.67□□□□□ -2.14
DDC1Q08949 YCR087C-AYCR087C-A 462 nt1.67□□□□□ -2.14
DDC1Q08949 snR79snR79 84 nt1.67□□□□□ -2.14
DDC1Q08949 YHL037CYHL037C 402 nt1.67□□□□□ -2.14
DDC1Q08949 NFU1YKL040C 771 nt1.67□□□□□ -2.14
DDC1Q08949 YOR192C-CYOR192C-C 237 nt1.67□□□□□ -2.14
DDC1Q08949 GPX2YBR244W 489 nt1.67□□□□□ -2.14
DDC1Q08949 NAM7YMR080C 2916 nt1.67□□□□□ -2.14
DDC1Q08949 CDC24YAL041W 2565 nt1.66□□□□□ -2.14
DDC1Q08949 HER1YOR227W 3741 nt1.66□□□□□ -2.14
DDC1Q08949 COX1Q0045 1605 nt1.66□□□□□ -2.14
DDC1Q08949 YHR073W-AYHR073W-A 177 nt1.66□□□□□ -2.14
DDC1Q08949 SGD1YLR336C 2700 nt1.66□□□□□ -2.14
DDC1Q08949 ATP17YDR377W 306 nt1.65□□□□□ -2.15
DDC1Q08949 AGA2YGL032C 264 nt1.65□□□□□ -2.15
DDC1Q08949 YKL063CYKL063C 504 nt1.65□□□□□ -2.15
DDC1Q08949 CYB5YNL111C 363 nt1.65□□□□□ -2.15
DDC1Q08949 YOR146WYOR146W 306 nt1.65□□□□□ -2.15
DDC1Q08949 PET309YLR067C 2898 nt1.65□□□□□ -2.15
DDC1Q08949 MYO4YAL029C 4416 nt1.65□□□□□ -2.15
DDC1Q08949 YLR149CYLR149C 2193 nt1.64□□□□□ -2.15
DDC1Q08949 HCS1YKL017C 2052 nt1.64□□□□□ -2.15
DDC1Q08949 IES5YER092W 378 nt1.64□□□□□ -2.15
DDC1Q08949 ZEO1YOL109W 342 nt1.64□□□□□ -2.15
DDC1Q08949 RPH1YER169W 2391 nt1.64□□□□□ -2.15
DDC1Q08949 PLC1YPL268W 2610 nt1.64□□□□□ -2.15
DDC1Q08949 NOT5YPR072W 1683 nt1.64□□□□□ -2.15
DDC1Q08949 MEC1YBR136W 7107 nt1.64□□□□□ -2.15
DDC1Q08949 YER079WYER079W 633 nt1.63□□□□□ -2.15
DDC1Q08949 YER121WYER121W 345 nt1.63□□□□□ -2.15
DDC1Q08949 UBC7YMR022W 498 nt1.63□□□□□ -2.15
DDC1Q08949 LEE1YPL054W 906 nt1.63□□□□□ -2.15
DDC1Q08949 YPR146CYPR146C 330 nt1.63□□□□□ -2.15
DDC1Q08949 ADR1YDR216W 3972 nt1.63□□□□□ -2.15
DDC1Q08949 LYS9YNR050C 1341 nt1.63□□□□□ -2.15
DDC1Q08949 BTT1YDR252W 450 nt1.62□□□□□ -2.15
DDC1Q08949 YER023C-AYER023C-A 213 nt1.62□□□□□ -2.15
DDC1Q08949 YLR154W-FYLR154W-F 141 nt1.62□□□□□ -2.15
DDC1Q08949 PGA1YNL158W 597 nt1.62□□□□□ -2.15
DDC1Q08949 ERP4YOR016C 624 nt1.62□□□□□ -2.15
DDC1Q08949 YBR224WYBR224W 516 nt1.62□□□□□ -2.15
DDC1Q08949 MSS11YMR164C 2277 nt1.62□□□□□ -2.15
DDC1Q08949 MNL2YLR057W 2550 nt1.61□□□□□ -2.15
DDC1Q08949 YOR343W-BYOR343W-B 5313 nt1.61□□□□□ -2.15
DDC1Q08949 YBR121C-AYBR121C-A 159 nt1.61□□□□□ -2.15
DDC1Q08949 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
DDC1Q08949 MKT1YNL085W 2493 nt1.6□□□□□ -2.15
DDC1Q08949 YER087C-AYER087C-A 552 nt1.6□□□□□ -2.15
DDC1Q08949 URM1YIL008W 300 nt1.6□□□□□ -2.15
DDC1Q08949 TMA22YJR014W 597 nt1.6□□□□□ -2.15
DDC1Q08949 RPS18BYML026C 441 nt1.6□□□□□ -2.15
DDC1Q08949 YBL083CYBL083C 426 nt1.6□□□□□ -2.15
DDC1Q08949 YPL238CYPL238C 390 nt1.6□□□□□ -2.15
DDC1Q08949 YSW1YBR148W 1830 nt1.6□□□□□ -2.15
DDC1Q08949 CBS1YDL069C 690 nt1.59□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms