Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 ZIP1YDR285W 2628 nt3.53□□□□□ -1.84
CAF120P53836 ALK2YBL009W 2031 nt3.53□□□□□ -1.84
CAF120P53836 RIX1YHR197W 2292 nt3.53□□□□□ -1.85
CAF120P53836 TMA19YKL056C 504 nt3.52□□□□□ -1.85
CAF120P53836 KHA1YJL094C 2622 nt3.52□□□□□ -1.85
CAF120P53836 YDL242WYDL242W 354 nt3.51□□□□□ -1.85
CAF120P53836 TIM11YDR322C-A 291 nt3.51□□□□□ -1.85
CAF120P53836 NCA2YPR155C 1851 nt3.51□□□□□ -1.85
CAF120P53836 RRN6YBL014C 2685 nt3.51□□□□□ -1.85
CAF120P53836 FRE2YKL220C 2136 nt3.5□□□□□ -1.85
CAF120P53836 HOS4YIL112W 3252 nt3.5□□□□□ -1.85
CAF120P53836 PTC5YOR090C 1719 nt3.5□□□□□ -1.85
CAF120P53836 BNI4YNL233W 2679 nt3.5□□□□□ -1.85
CAF120P53836 NMA111YNL123W 2994 nt3.5□□□□□ -1.85
CAF120P53836 YOR019WYOR019W 2193 nt3.5□□□□□ -1.85
CAF120P53836 NOC3YLR002C 1992 nt3.5□□□□□ -1.85
CAF120P53836 MDV1YJL112W 2145 nt3.49□□□□□ -1.85
CAF120P53836 YDR464C-AYDR464C-A 189 nt3.49□□□□□ -1.85
CAF120P53836 YBL065WYBL065W 345 nt3.49□□□□□ -1.85
CAF120P53836 RPL25YOL127W 429 nt3.49□□□□□ -1.85
CAF120P53836 YPL044CYPL044C 549 nt3.49□□□□□ -1.85
CAF120P53836 NUP120YKL057C 3114 nt3.49□□□□□ -1.85
CAF120P53836 DOT6YER088C 2013 nt3.49□□□□□ -1.85
CAF120P53836 KAR3YPR141C 2190 nt3.49□□□□□ -1.85
CAF120P53836 SMC2YFR031C 3513 nt3.49□□□□□ -1.85
CAF120P53836 SIZ1YDR409W 2715 nt3.49□□□□□ -1.85
CAF120P53836 OSH3YHR073W 2991 nt3.48□□□□□ -1.85
CAF120P53836 ELG1YOR144C 2376 nt3.48□□□□□ -1.85
CAF120P53836 LSO2YGR169C-A 279 nt3.48□□□□□ -1.85
CAF120P53836 APL5YPL195W 2799 nt3.48□□□□□ -1.85
CAF120P53836 SLA1YBL007C 3735 nt3.48□□□□□ -1.85
CAF120P53836 PRP22YER013W 3438 nt3.48□□□□□ -1.85
CAF120P53836 TAF1YGR274C 3201 nt3.48□□□□□ -1.85
CAF120P53836 YNL144CYNL144C 2223 nt3.47□□□□□ -1.85
CAF120P53836 tF(GAA)DtF(GAA)D 73 nt3.47□□□□□ -1.85
CAF120P53836 tF(GAA)NtF(GAA)N 73 nt3.47□□□□□ -1.85
CAF120P53836 YGR050CYGR050C 357 nt3.47□□□□□ -1.85
CAF120P53836 CTF4YPR135W 2784 nt3.47□□□□□ -1.85
CAF120P53836 ZIP2YGL249W 2115 nt3.47□□□□□ -1.85
CAF120P53836 INP2YMR163C 2118 nt3.47□□□□□ -1.85
CAF120P53836 YDL196WYDL196W 330 nt3.46□□□□□ -1.86
CAF120P53836 tK(UUU)DtK(UUU)D 73 nt3.46□□□□□ -1.86
CAF120P53836 tK(UUU)G1tK(UUU)G1 73 nt3.46□□□□□ -1.86
CAF120P53836 tK(UUU)G2tK(UUU)G2 73 nt3.46□□□□□ -1.86
CAF120P53836 tK(UUU)KtK(UUU)K 73 nt3.46□□□□□ -1.86
CAF120P53836 tK(UUU)LtK(UUU)L 73 nt3.46□□□□□ -1.86
CAF120P53836 tK(UUU)OtK(UUU)O 73 nt3.46□□□□□ -1.86
CAF120P53836 tK(UUU)PtK(UUU)P 73 nt3.46□□□□□ -1.86
CAF120P53836 KAP95YLR347C 2586 nt3.46□□□□□ -1.86
CAF120P53836 GIN4YDR507C 3429 nt3.45□□□□□ -1.86
CAF120P53836 snR81snR81 201 nt3.45□□□□□ -1.86
CAF120P53836 YMR122W-AYMR122W-A 255 nt3.45□□□□□ -1.86
CAF120P53836 EFR3YMR212C 2349 nt3.45□□□□□ -1.86
CAF120P53836 PUF4YGL014W 2667 nt3.45□□□□□ -1.86
CAF120P53836 STU1YBL034C 4542 nt3.45□□□□□ -1.86
CAF120P53836 DAN4YJR151C 3486 nt3.44□□□□□ -1.86
CAF120P53836 PEP3YLR148W 2757 nt3.44□□□□□ -1.86
CAF120P53836 SPT4YGR063C 309 nt3.44□□□□□ -1.86
CAF120P53836 RAD26YJR035W 3258 nt3.44□□□□□ -1.86
CAF120P53836 NPR1YNL183C 2373 nt3.44□□□□□ -1.86
CAF120P53836 SPA2YLL021W 4401 nt3.43□□□□□ -1.86
CAF120P53836 YPP1YGR198W 2454 nt3.43□□□□□ -1.86
CAF120P53836 HYP2YEL034W 474 nt3.43□□□□□ -1.86
CAF120P53836 TRS120YDR407C 3870 nt3.43□□□□□ -1.86
CAF120P53836 SIP3YNL257C 3690 nt3.43□□□□□ -1.86
CAF120P53836 SSM4YIL030C 3960 nt3.42□□□□□ -1.86
CAF120P53836 SEC63YOR254C 1992 nt3.42□□□□□ -1.86
CAF120P53836 VAS1YGR094W 3315 nt3.42□□□□□ -1.86
CAF120P53836 RPS17BYDR447C 411 nt3.42□□□□□ -1.86
CAF120P53836 YLR352WYLR352W 2424 nt3.42□□□□□ -1.86
CAF120P53836 ALA1YOR335C 2877 nt3.41□□□□□ -1.86
CAF120P53836 RAD2YGR258C 3096 nt3.41□□□□□ -1.86
CAF120P53836 YER039C-AYER039C-A 219 nt3.41□□□□□ -1.86
CAF120P53836 URA2YJL130C 6645 nt3.41□□□□□ -1.86
CAF120P53836 SPO75YLL005C 2607 nt3.4□□□□□ -1.86
CAF120P53836 YDR034C-DYDR034C-D 5313 nt3.4□□□□□ -1.86
CAF120P53836 RCO1YMR075W 2055 nt3.4□□□□□ -1.86
CAF120P53836 ANB1YJR047C 474 nt3.4□□□□□ -1.87
CAF120P53836 PHD1YKL043W 1101 nt3.4□□□□□ -1.87
CAF120P53836 FIG4YNL325C 2640 nt3.4□□□□□ -1.87
CAF120P53836 COS111YBR203W 2775 nt3.4□□□□□ -1.87
CAF120P53836 YPR022CYPR022C 3402 nt3.4□□□□□ -1.87
CAF120P53836 MDN1YLR106C 14733 nt3.39□□□□□ -1.87
CAF120P53836 RPL31AYDL075W 342 nt3.39□□□□□ -1.87
CAF120P53836 RPS8AYBL072C 603 nt3.39□□□□□ -1.87
CAF120P53836 PKH1YDR490C 2301 nt3.39□□□□□ -1.87
CAF120P53836 AI2Q0055 2565 nt3.39□□□□□ -1.87
CAF120P53836 DUF1YOL087C 3351 nt3.38□□□□□ -1.87
CAF120P53836 SQS1YNL224C 2304 nt3.38□□□□□ -1.87
CAF120P53836 DIA2YOR080W 2199 nt3.38□□□□□ -1.87
CAF120P53836 YLL019W-AYLL019W-A 93 nt3.38□□□□□ -1.87
CAF120P53836 YNL266WYNL266W 420 nt3.38□□□□□ -1.87
CAF120P53836 YPR108W-AYPR108W-A 213 nt3.38□□□□□ -1.87
CAF120P53836 STE6YKL209C 3873 nt3.38□□□□□ -1.87
CAF120P53836 SLD3YGL113W 2007 nt3.37□□□□□ -1.87
CAF120P53836 TAF2YCR042C 4224 nt3.37□□□□□ -1.87
CAF120P53836 tV(CAC)DtV(CAC)D 73 nt3.37□□□□□ -1.87
CAF120P53836 tV(CAC)HtV(CAC)H 73 nt3.37□□□□□ -1.87
CAF120P53836 EPL1YFL024C 2499 nt3.37□□□□□ -1.87
CAF120P53836 FLO9YAL063C 3969 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 113.4 ms