Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 PEX4YGR133W 552 nt2.09□□□□□ -2.07
SEF1P34228 YOR053WYOR053W 342 nt2.09□□□□□ -2.07
SEF1P34228 YOR146WYOR146W 306 nt2.09□□□□□ -2.07
SEF1P34228 YOR293C-AYOR293C-A 150 nt2.09□□□□□ -2.07
SEF1P34228 LYS9YNR050C 1341 nt2.09□□□□□ -2.08
SEF1P34228 NOT5YPR072W 1683 nt2.09□□□□□ -2.08
SEF1P34228 VMR1YHL035C 4779 nt2.08□□□□□ -2.08
SEF1P34228 SVL3YPL032C 2478 nt2.08□□□□□ -2.08
SEF1P34228 YBL071CYBL071C 309 nt2.08□□□□□ -2.08
SEF1P34228 YOR392WYOR392W 444 nt2.08□□□□□ -2.08
SEF1P34228 YPL238CYPL238C 390 nt2.08□□□□□ -2.08
SEF1P34228 YBR121C-AYBR121C-A 159 nt2.08□□□□□ -2.08
SEF1P34228 RGA1YOR127W 3024 nt2.08□□□□□ -2.08
SEF1P34228 VPS8YAL002W 3825 nt2.08□□□□□ -2.08
SEF1P34228 SAP185YJL098W 3177 nt2.08□□□□□ -2.08
SEF1P34228 YDR524W-CYDR524W-C 90 nt2.07□□□□□ -2.08
SEF1P34228 HSK3YKL138C-A 210 nt2.07□□□□□ -2.08
SEF1P34228 YLR053CYLR053C 327 nt2.07□□□□□ -2.08
SEF1P34228 YLR434CYLR434C 384 nt2.07□□□□□ -2.08
SEF1P34228 YOR394C-AYOR394C-A 168 nt2.07□□□□□ -2.08
SEF1P34228 YBR224WYBR224W 516 nt2.07□□□□□ -2.08
SEF1P34228 MCD1YDL003W 1701 nt2.06□□□□□ -2.08
SEF1P34228 RBK1YCR036W 1002 nt2.06□□□□□ -2.08
SEF1P34228 RTT102YGR275W 474 nt2.06□□□□□ -2.08
SEF1P34228 YAL068W-AYAL068W-A 255 nt2.06□□□□□ -2.08
SEF1P34228 SCH9YHR205W 2475 nt2.06□□□□□ -2.08
SEF1P34228 SET2YJL168C 2202 nt2.05□□□□□ -2.08
SEF1P34228 BSC3YLR465C 309 nt2.05□□□□□ -2.08
SEF1P34228 YML009C-AYML009C-A 327 nt2.05□□□□□ -2.08
SEF1P34228 YOL159C-AYOL159C-A 273 nt2.05□□□□□ -2.08
SEF1P34228 YPR099CYPR099C 357 nt2.05□□□□□ -2.08
SEF1P34228 CDC60YPL160W 3273 nt2.05□□□□□ -2.08
SEF1P34228 GRR1YJR090C 3456 nt2.05□□□□□ -2.08
SEF1P34228 NOP14YDL148C 2433 nt2.04□□□□□ -2.08
SEF1P34228 YDL152WYDL152W 366 nt2.04□□□□□ -2.08
SEF1P34228 YKR075W-AYKR075W-A 270 nt2.04□□□□□ -2.08
SEF1P34228 ELG1YOR144C 2376 nt2.04□□□□□ -2.08
SEF1P34228 TOR2YKL203C 7425 nt2.04□□□□□ -2.08
SEF1P34228 PEP3YLR148W 2757 nt2.04□□□□□ -2.08
SEF1P34228 DOT6YER088C 2013 nt2.03□□□□□ -2.08
SEF1P34228 BRP1YGL007W 378 nt2.03□□□□□ -2.08
SEF1P34228 YHL046W-AYHL046W-A 327 nt2.03□□□□□ -2.08
SEF1P34228 PGA1YNL158W 597 nt2.03□□□□□ -2.08
SEF1P34228 YBL083CYBL083C 426 nt2.03□□□□□ -2.08
SEF1P34228 YPL182CYPL182C 384 nt2.03□□□□□ -2.08
SEF1P34228 IRC8YJL051W 2469 nt2.03□□□□□ -2.08
SEF1P34228 MNL2YLR057W 2550 nt2.03□□□□□ -2.09
SEF1P34228 DNF1YER166W 4716 nt2.02□□□□□ -2.09
SEF1P34228 YHR214C-BYHR214C-B 5382 nt2.02□□□□□ -2.09
SEF1P34228 MGA2YIR033W 3342 nt2.02□□□□□ -2.09
SEF1P34228 BUD2YKL092C 3315 nt2.02□□□□□ -2.09
SEF1P34228 YDL062WYDL062W 426 nt2.02□□□□□ -2.09
SEF1P34228 YGL239CYGL239C 315 nt2.02□□□□□ -2.09
SEF1P34228 SAP190YKR028W 3102 nt2.02□□□□□ -2.09
SEF1P34228 YDR341CYDR341C 1824 nt2.02□□□□□ -2.09
SEF1P34228 SMY1YKL079W 1971 nt2.01□□□□□ -2.09
SEF1P34228 GNT1YOR320C 1476 nt2.01□□□□□ -2.09
SEF1P34228 COS111YBR203W 2775 nt2.01□□□□□ -2.09
SEF1P34228 ATG31YDR022C 591 nt2.01□□□□□ -2.09
SEF1P34228 EMP24YGL200C 612 nt2.01□□□□□ -2.09
SEF1P34228 DIS3YOL021C 3006 nt2□□□□□ -2.09
SEF1P34228 YAP6YDR259C 1152 nt2□□□□□ -2.09
SEF1P34228 CYB5YNL111C 363 nt2□□□□□ -2.09
SEF1P34228 YBR184WYBR184W 1572 nt2□□□□□ -2.09
SEF1P34228 SEF1YBL066C 3447 nt2□□□□□ -2.09
SEF1P34228 PAN3YKL025C 2040 nt2□□□□□ -2.09
SEF1P34228 SYH1YPL105C 2550 nt2□□□□□ -2.09
SEF1P34228 ATG9YDL149W 2994 nt1.99□□□□□ -2.09
SEF1P34228 SLM1YIL105C 2061 nt1.99□□□□□ -2.09
SEF1P34228 YCR043CYCR043C 384 nt1.99□□□□□ -2.09
SEF1P34228 YDL011CYDL011C 324 nt1.99□□□□□ -2.09
SEF1P34228 RPL37BYDR500C 267 nt1.99□□□□□ -2.09
SEF1P34228 GCN4YEL009C 846 nt1.99□□□□□ -2.09
SEF1P34228 ANS1YHR126C 480 nt1.99□□□□□ -2.09
SEF1P34228 CAT2YML042W 2013 nt1.99□□□□□ -2.09
SEF1P34228 SSD1YDR293C 3753 nt1.99□□□□□ -2.09
SEF1P34228 UBP2YOR124C 3819 nt1.98□□□□□ -2.09
SEF1P34228 PLC1YPL268W 2610 nt1.98□□□□□ -2.09
SEF1P34228 DAD4YDR320C-A 219 nt1.98□□□□□ -2.09
SEF1P34228 WIP1YDR374W-A 270 nt1.98□□□□□ -2.09
SEF1P34228 YIL066W-AYIL066W-A 444 nt1.98□□□□□ -2.09
SEF1P34228 YAR047CYAR047C 321 nt1.98□□□□□ -2.09
SEF1P34228 YBR012CYBR012C 420 nt1.98□□□□□ -2.09
SEF1P34228 IRR1YIL026C 3453 nt1.98□□□□□ -2.09
SEF1P34228 TFC3YAL001C 3483 nt1.98□□□□□ -2.09
SEF1P34228 ZRG8YER033C 3231 nt1.98□□□□□ -2.09
SEF1P34228 USO1YDL058W 5373 nt1.98□□□□□ -2.09
SEF1P34228 CHC1YGL206C 4962 nt1.98□□□□□ -2.09
SEF1P34228 DAS1YJL149W 1992 nt1.98□□□□□ -2.09
SEF1P34228 KIP1YBL063W 3336 nt1.97□□□□□ -2.09
SEF1P34228 YAL059C-AYAL059C-A 423 nt1.97□□□□□ -2.09
SEF1P34228 HER1YOR227W 3741 nt1.97□□□□□ -2.09
SEF1P34228 PDR8YLR266C 2106 nt1.97□□□□□ -2.09
SEF1P34228 UTP22YGR090W 3714 nt1.96□□□□□ -2.09
SEF1P34228 ALK2YBL009W 2031 nt1.96□□□□□ -2.09
SEF1P34228 TOF2YKR010C 2316 nt1.96□□□□□ -2.1
SEF1P34228 NAM7YMR080C 2916 nt1.96□□□□□ -2.1
SEF1P34228 SNF5YBR289W 2718 nt1.96□□□□□ -2.1
SEF1P34228 YHR071C-AYHR071C-A 321 nt1.96□□□□□ -2.1
SEF1P34228 RPH1YER169W 2391 nt1.95□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms