Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 ALK1YGL021W 2283 nt1.36□□□□□ -2.19
VPS3P23643 MAD1YGL086W 2250 nt1.36□□□□□ -2.19
VPS3P23643 SGD1YLR336C 2700 nt1.36□□□□□ -2.19
VPS3P23643 RVS161YCR009C 798 nt1.36□□□□□ -2.19
VPS3P23643 YDL187CYDL187C 330 nt1.36□□□□□ -2.19
VPS3P23643 YER088C-AYER088C-A 324 nt1.36□□□□□ -2.19
VPS3P23643 YER121WYER121W 345 nt1.36□□□□□ -2.19
VPS3P23643 YJL015CYJL015C 285 nt1.36□□□□□ -2.19
VPS3P23643 PBY1YBR094W 2262 nt1.36□□□□□ -2.19
VPS3P23643 KAR3YPR141C 2190 nt1.35□□□□□ -2.19
VPS3P23643 IML1YJR138W 4755 nt1.35□□□□□ -2.19
VPS3P23643 CDC36YDL165W 576 nt1.35□□□□□ -2.19
VPS3P23643 CHZ1YER030W 462 nt1.35□□□□□ -2.19
VPS3P23643 YFR009W-AYFR009W-A 258 nt1.35□□□□□ -2.19
VPS3P23643 YLR271WYLR271W 825 nt1.35□□□□□ -2.19
VPS3P23643 YNL319WYNL319W 441 nt1.35□□□□□ -2.19
VPS3P23643 YOL029CYOL029C 606 nt1.35□□□□□ -2.19
VPS3P23643 VPS52YDR484W 1926 nt1.34□□□□□ -2.19
VPS3P23643 STF2YGR008C 255 nt1.34□□□□□ -2.19
VPS3P23643 CIC1YHR052W 1131 nt1.34□□□□□ -2.19
VPS3P23643 tT(UGU)Q1tT(UGU)Q1 76 nt1.34□□□□□ -2.19
VPS3P23643 tV(UAC)BtV(UAC)B 74 nt1.34□□□□□ -2.19
VPS3P23643 tV(UAC)DtV(UAC)D 74 nt1.34□□□□□ -2.19
VPS3P23643 YJL022WYJL022W 309 nt1.34□□□□□ -2.19
VPS3P23643 PRP21YJL203W 843 nt1.34□□□□□ -2.19
VPS3P23643 YOR152CYOR152C 771 nt1.34□□□□□ -2.19
VPS3P23643 YPL197CYPL197C 414 nt1.34□□□□□ -2.19
VPS3P23643 AFR1YDR085C 1863 nt1.34□□□□□ -2.19
VPS3P23643 IRE1YHR079C 3348 nt1.34□□□□□ -2.2
VPS3P23643 PEP3YLR148W 2757 nt1.33□□□□□ -2.2
VPS3P23643 YJR140W-AYJR140W-A 150 nt1.33□□□□□ -2.2
VPS3P23643 IRC19YLL033W 693 nt1.33□□□□□ -2.2
VPS3P23643 COX7YMR256C 183 nt1.33□□□□□ -2.2
VPS3P23643 EGD1YPL037C 474 nt1.33□□□□□ -2.2
VPS3P23643 UTP13YLR222C 2454 nt1.32□□□□□ -2.2
VPS3P23643 AHC1YOR023C 1701 nt1.32□□□□□ -2.2
VPS3P23643 RLM1YPL089C 2031 nt1.32□□□□□ -2.2
VPS3P23643 YDR169C-AYDR169C-A 150 nt1.32□□□□□ -2.2
VPS3P23643 IES5YER092W 378 nt1.32□□□□□ -2.2
VPS3P23643 VPS55YJR044C 423 nt1.32□□□□□ -2.2
VPS3P23643 RRT15YLR162W-A 189 nt1.32□□□□□ -2.2
VPS3P23643 NBP1YLR457C 960 nt1.32□□□□□ -2.2
VPS3P23643 HUG1YML058W-A 207 nt1.32□□□□□ -2.2
VPS3P23643 SWS2YNL081C 432 nt1.32□□□□□ -2.2
VPS3P23643 YBR012W-AYBR012W-A 1323 nt1.32□□□□□ -2.2
VPS3P23643 YOR142W-AYOR142W-A 1323 nt1.32□□□□□ -2.2
VPS3P23643 YPR158W-AYPR158W-A 1323 nt1.32□□□□□ -2.2
VPS3P23643 TRM732YMR259C 4263 nt1.32□□□□□ -2.2
VPS3P23643 REF2YDR195W 1602 nt1.32□□□□□ -2.2
VPS3P23643 RAD9YDR217C 3930 nt1.31□□□□□ -2.2
VPS3P23643 SLX9YGR081C 633 nt1.31□□□□□ -2.2
VPS3P23643 tR(UCU)Q1tR(UCU)Q1 73 nt1.31□□□□□ -2.2
VPS3P23643 YLR252WYLR252W 306 nt1.31□□□□□ -2.2
VPS3P23643 YJR029WYJR029W 5268 nt1.31□□□□□ -2.2
VPS3P23643 YPR137C-BYPR137C-B 5268 nt1.31□□□□□ -2.2
VPS3P23643 YER175W-AYER175W-A 165 nt1.3□□□□□ -2.2
VPS3P23643 VMA21YGR105W 234 nt1.3□□□□□ -2.2
VPS3P23643 CGI121YML036W 546 nt1.3□□□□□ -2.2
VPS3P23643 TTI1YKL033W 3117 nt1.29□□□□□ -2.2
VPS3P23643 YFL012W-AYFL012W-A 375 nt1.29□□□□□ -2.2
VPS3P23643 YFL012WYFL012W 447 nt1.29□□□□□ -2.2
VPS3P23643 YKL111CYKL111C 336 nt1.29□□□□□ -2.2
VPS3P23643 SPO75YLL005C 2607 nt1.29□□□□□ -2.2
VPS3P23643 SMY1YKL079W 1971 nt1.28□□□□□ -2.2
VPS3P23643 snR79snR79 84 nt1.28□□□□□ -2.2
VPS3P23643 MTC7YEL033W 420 nt1.28□□□□□ -2.2
VPS3P23643 SPO13YHR014W 876 nt1.28□□□□□ -2.2
VPS3P23643 RPC10YHR143W-A 213 nt1.28□□□□□ -2.2
VPS3P23643 YIL020C-AYIL020C-A 339 nt1.28□□□□□ -2.2
VPS3P23643 SPC1YJR010C-A 285 nt1.28□□□□□ -2.2
VPS3P23643 ABM1YJR108W 372 nt1.28□□□□□ -2.2
VPS3P23643 YKL183C-AYKL183C-A 213 nt1.28□□□□□ -2.2
VPS3P23643 COF1YLL050C 432 nt1.28□□□□□ -2.2
VPS3P23643 AFB1YLR040C 675 nt1.28□□□□□ -2.2
VPS3P23643 YOL159CYOL159C 516 nt1.28□□□□□ -2.2
VPS3P23643 CRG1YHR209W 876 nt1.27□□□□□ -2.21
VPS3P23643 YKL023C-AYKL023C-A 228 nt1.27□□□□□ -2.21
VPS3P23643 CDC24YAL041W 2565 nt1.26□□□□□ -2.21
VPS3P23643 YJR079WYJR079W 330 nt1.26□□□□□ -2.21
VPS3P23643 SIP4YJL089W 2490 nt1.26□□□□□ -2.21
VPS3P23643 APL2YKL135C 2181 nt1.25□□□□□ -2.21
VPS3P23643 YIL029CYIL029C 429 nt1.25□□□□□ -2.21
VPS3P23643 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
VPS3P23643 MAK10YEL053C 2202 nt1.25□□□□□ -2.21
VPS3P23643 YBR184WYBR184W 1572 nt1.25□□□□□ -2.21
VPS3P23643 SNF5YBR289W 2718 nt1.24□□□□□ -2.21
VPS3P23643 DGR2YKL121W 2559 nt1.24□□□□□ -2.21
VPS3P23643 NST1YNL091W 3723 nt1.24□□□□□ -2.21
VPS3P23643 RCN1YKL159C 636 nt1.24□□□□□ -2.21
VPS3P23643 IRR1YIL026C 3453 nt1.24□□□□□ -2.21
VPS3P23643 OSH6YKR003W 1347 nt1.23□□□□□ -2.21
VPS3P23643 SMB1YER029C 591 nt1.23□□□□□ -2.21
VPS3P23643 YER188C-AYER188C-A 300 nt1.23□□□□□ -2.21
VPS3P23643 FCF2YLR051C 654 nt1.23□□□□□ -2.21
VPS3P23643 YBL029C-AYBL029C-A 285 nt1.23□□□□□ -2.21
VPS3P23643 MSH5YDL154W 2706 nt1.23□□□□□ -2.21
VPS3P23643 AZF1YOR113W 2745 nt1.23□□□□□ -2.21
VPS3P23643 YHR214C-CYHR214C-C 1437 nt1.23□□□□□ -2.21
VPS3P23643 SHE9YDR393W 1371 nt1.22□□□□□ -2.21
VPS3P23643 SEF1YBL066C 3447 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms