Protein–RNA interactions for Protein: P0CX28

RPL42B, 60S ribosomal protein L42-B, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42BP0CX28 RPO41YFL036W 4056 nt2.08□□□□□ -2.08
RPL42BP0CX28 PEX8YGR077C 1770 nt2.08□□□□□ -2.08
RPL42BP0CX28 AFI1YOR129C 2682 nt2.07□□□□□ -2.08
RPL42BP0CX28 YBT1YLL048C 4986 nt2.07□□□□□ -2.08
RPL42BP0CX28 SNF5YBR289W 2718 nt2.07□□□□□ -2.08
RPL42BP0CX28 YBR184WYBR184W 1572 nt2.07□□□□□ -2.08
RPL42BP0CX28 AXL1YPR122W 3627 nt2.07□□□□□ -2.08
RPL42BP0CX28 CRM1YGR218W 3255 nt2.07□□□□□ -2.08
RPL42BP0CX28 YPL216WYPL216W 3309 nt2.07□□□□□ -2.08
RPL42BP0CX28 YDL062WYDL062W 426 nt2.07□□□□□ -2.08
RPL42BP0CX28 RPA34YJL148W 702 nt2.07□□□□□ -2.08
RPL42BP0CX28 DAD3YBR233W-A 285 nt2.07□□□□□ -2.08
RPL42BP0CX28 snR49snR49 165 nt2.07□□□□□ -2.08
RPL42BP0CX28 RRP6YOR001W 2202 nt2.07□□□□□ -2.08
RPL42BP0CX28 COG8YML071C 1824 nt2.07□□□□□ -2.08
RPL42BP0CX28 TCB2YNL087W 3537 nt2.07□□□□□ -2.08
RPL42BP0CX28 INP51YIL002C 2841 nt2.06□□□□□ -2.08
RPL42BP0CX28 SEF1YBL066C 3447 nt2.06□□□□□ -2.08
RPL42BP0CX28 VPH1YOR270C 2523 nt2.06□□□□□ -2.08
RPL42BP0CX28 NPC2YDL046W 522 nt2.06□□□□□ -2.08
RPL42BP0CX28 PCC1YKR095W-A 267 nt2.06□□□□□ -2.08
RPL42BP0CX28 YOR073W-AYOR073W-A 234 nt2.06□□□□□ -2.08
RPL42BP0CX28 YBR224WYBR224W 516 nt2.06□□□□□ -2.08
RPL42BP0CX28 YME2YMR302C 2553 nt2.06□□□□□ -2.08
RPL42BP0CX28 HOS4YIL112W 3252 nt2.06□□□□□ -2.08
RPL42BP0CX28 ARP7YPR034W 1434 nt2.06□□□□□ -2.08
RPL42BP0CX28 CAF120YNL278W 3183 nt2.06□□□□□ -2.08
RPL42BP0CX28 YEL043WYEL043W 2871 nt2.05□□□□□ -2.08
RPL42BP0CX28 RAD61YDR014W 1944 nt2.05□□□□□ -2.08
RPL42BP0CX28 HDA3YPR179C 1968 nt2.05□□□□□ -2.08
RPL42BP0CX28 SRO77YBL106C 3033 nt2.05□□□□□ -2.08
RPL42BP0CX28 YLR149CYLR149C 2193 nt2.05□□□□□ -2.08
RPL42BP0CX28 YFH1YDL120W 525 nt2.05□□□□□ -2.08
RPL42BP0CX28 snR80snR80 171 nt2.05□□□□□ -2.08
RPL42BP0CX28 CDC36YDL165W 576 nt2.05□□□□□ -2.08
RPL42BP0CX28 YOR225WYOR225W 330 nt2.05□□□□□ -2.08
RPL42BP0CX28 UTP14YML093W 2700 nt2.05□□□□□ -2.08
RPL42BP0CX28 PEP3YLR148W 2757 nt2.05□□□□□ -2.08
RPL42BP0CX28 CDC27YBL084C 2277 nt2.05□□□□□ -2.08
RPL42BP0CX28 GIS1YDR096W 2685 nt2.04□□□□□ -2.08
RPL42BP0CX28 SEC26YDR238C 2922 nt2.04□□□□□ -2.08
RPL42BP0CX28 SWR1YDR334W 4545 nt2.04□□□□□ -2.08
RPL42BP0CX28 YEL020C-BYEL020C-B 198 nt2.04□□□□□ -2.08
RPL42BP0CX28 RPL23BYER117W 414 nt2.04□□□□□ -2.08
RPL42BP0CX28 AMS1YGL156W 3252 nt2.04□□□□□ -2.08
RPL42BP0CX28 YGR050CYGR050C 357 nt2.04□□□□□ -2.08
RPL42BP0CX28 SDH2YLL041C 801 nt2.04□□□□□ -2.08
RPL42BP0CX28 YML007C-AYML007C-A 111 nt2.04□□□□□ -2.08
RPL42BP0CX28 HSC82YMR186W 2118 nt2.04□□□□□ -2.08
RPL42BP0CX28 EFR3YMR212C 2349 nt2.04□□□□□ -2.08
RPL42BP0CX28 NUT2YPR168W 474 nt2.04□□□□□ -2.08
RPL42BP0CX28 CBF2YGR140W 2871 nt2.04□□□□□ -2.08
RPL42BP0CX28 SCH9YHR205W 2475 nt2.03□□□□□ -2.08
RPL42BP0CX28 YDR406W-AYDR406W-A 246 nt2.03□□□□□ -2.08
RPL42BP0CX28 ERP6YGL002W 651 nt2.03□□□□□ -2.08
RPL42BP0CX28 SNC1YAL030W 354 nt2.03□□□□□ -2.08
RPL42BP0CX28 YOR333CYOR333C 417 nt2.03□□□□□ -2.08
RPL42BP0CX28 RPS12YOR369C 432 nt2.03□□□□□ -2.08
RPL42BP0CX28 YPR063CYPR063C 423 nt2.03□□□□□ -2.08
RPL42BP0CX28 MCD1YDL003W 1701 nt2.03□□□□□ -2.09
RPL42BP0CX28 KEL2YGR238C 2649 nt2.02□□□□□ -2.09
RPL42BP0CX28 MNL2YLR057W 2550 nt2.02□□□□□ -2.09
RPL42BP0CX28 EMC6YLL014W 327 nt2.02□□□□□ -2.09
RPL42BP0CX28 ABF2YMR072W 552 nt2.02□□□□□ -2.09
RPL42BP0CX28 IRA2YOL081W 9240 nt2.02□□□□□ -2.09
RPL42BP0CX28 SPO22YIL073C 2928 nt2.02□□□□□ -2.09
RPL42BP0CX28 CDC53YDL132W 2448 nt2.01□□□□□ -2.09
RPL42BP0CX28 YBL005W-BYBL005W-B 5268 nt2.01□□□□□ -2.09
RPL42BP0CX28 MRD1YPR112C 2664 nt2.01□□□□□ -2.09
RPL42BP0CX28 VPS34YLR240W 2628 nt2.01□□□□□ -2.09
RPL42BP0CX28 DBP10YDL031W 2988 nt2.01□□□□□ -2.09
RPL42BP0CX28 HYP2YEL034W 474 nt2.01□□□□□ -2.09
RPL42BP0CX28 SUP56tL(CAA)A 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 SUP53tL(CAA)C 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 tL(CAA)DtL(CAA)D 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 tL(CAA)G1tL(CAA)G1 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 SUP54tL(CAA)G2 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 tL(CAA)G3tL(CAA)G3 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 tL(CAA)KtL(CAA)K 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 tL(CAA)LtL(CAA)L 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 tL(CAA)MtL(CAA)M 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 tL(CAA)NtL(CAA)N 82 nt2.01□□□□□ -2.09
RPL42BP0CX28 YLR146W-AYLR146W-A 189 nt2.01□□□□□ -2.09
RPL42BP0CX28 YOL155W-AYOL155W-A 135 nt2.01□□□□□ -2.09
RPL42BP0CX28 HCS1YKL017C 2052 nt2.01□□□□□ -2.09
RPL42BP0CX28 MSB2YGR014W 3921 nt2□□□□□ -2.09
RPL42BP0CX28 MMS1YPR164W 4224 nt2□□□□□ -2.09
RPL42BP0CX28 GRR1YJR090C 3456 nt2□□□□□ -2.09
RPL42BP0CX28 YGR250CYGR250C 2346 nt2□□□□□ -2.09
RPL42BP0CX28 YDR426CYDR426C 378 nt2□□□□□ -2.09
RPL42BP0CX28 UPS1YLR193C 528 nt2□□□□□ -2.09
RPL42BP0CX28 JIP5YPR169W 1479 nt2□□□□□ -2.09
RPL42BP0CX28 COS111YBR203W 2775 nt1.99□□□□□ -2.09
RPL42BP0CX28 YNL018CYNL018C 1839 nt1.99□□□□□ -2.09
RPL42BP0CX28 TRX1YLR043C 312 nt1.99□□□□□ -2.09
RPL42BP0CX28 YMR194C-AYMR194C-A 225 nt1.99□□□□□ -2.09
RPL42BP0CX28 YBR064WYBR064W 429 nt1.99□□□□□ -2.09
RPL42BP0CX28 STB4YMR019W 2850 nt1.99□□□□□ -2.09
RPL42BP0CX28 GEA1YJR031C 4227 nt1.99□□□□□ -2.09
RPL42BP0CX28 NOP53YPL146C 1368 nt1.98□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 67.7 ms