Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.36■■□□□ 1.17
COL1A2P08123 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.36■■□□□ 1.17
COL1A2P08123 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.36■■□□□ 1.17
COL1A2P08123 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A2P08123 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.36■■□□□ 1.17
COL1A2P08123 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A2P08123 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.36■■□□□ 1.17
COL1A2P08123 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.36■■□□□ 1.17
COL1A2P08123 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A2P08123 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.36■■□□□ 1.17
COL1A2P08123 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.36■■□□□ 1.17
COL1A2P08123 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A2P08123 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.35■■□□□ 1.17
COL1A2P08123 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A2P08123 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A2P08123 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
COL1A2P08123 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
COL1A2P08123 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.35■■□□□ 1.17
COL1A2P08123 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.35■■□□□ 1.17
COL1A2P08123 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
COL1A2P08123 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
COL1A2P08123 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.35■■□□□ 1.17
COL1A2P08123 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.35■■□□□ 1.17
COL1A2P08123 AC124016.1-201ENST00000609552 612 ntBASIC22.35■■□□□ 1.17
COL1A2P08123 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.35■■□□□ 1.17
COL1A2P08123 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A2P08123 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.35■■□□□ 1.17
COL1A2P08123 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A2P08123 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.34■■□□□ 1.17
COL1A2P08123 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.34■■□□□ 1.17
COL1A2P08123 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 MIR718-201ENST00000390190 70 ntBASIC22.34■■□□□ 1.17
COL1A2P08123 AC239809.2-201ENST00000415381 517 ntBASIC22.34■■□□□ 1.17
COL1A2P08123 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.34■■□□□ 1.17
COL1A2P08123 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.34■■□□□ 1.17
COL1A2P08123 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.34■■□□□ 1.17
COL1A2P08123 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.34■■□□□ 1.17
COL1A2P08123 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.34■■□□□ 1.17
COL1A2P08123 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.34■■□□□ 1.17
COL1A2P08123 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL1A2P08123 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL1A2P08123 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL1A2P08123 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL1A2P08123 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL1A2P08123 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.33■■□□□ 1.17
COL1A2P08123 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
COL1A2P08123 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.33■■□□□ 1.17
COL1A2P08123 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL1A2P08123 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
COL1A2P08123 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
COL1A2P08123 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL1A2P08123 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL1A2P08123 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL1A2P08123 PTBP1P-201ENST00000554374 1601 ntBASIC22.32■■□□□ 1.16
COL1A2P08123 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.32■■□□□ 1.16
COL1A2P08123 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL1A2P08123 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
COL1A2P08123 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL1A2P08123 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL1A2P08123 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL1A2P08123 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.32■■□□□ 1.16
COL1A2P08123 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.32■■□□□ 1.16
COL1A2P08123 AL023875.1-201ENST00000640777 796 ntBASIC22.32■■□□□ 1.16
COL1A2P08123 LINC00565-201ENST00000562710 2331 ntBASIC22.32■■□□□ 1.16
COL1A2P08123 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
COL1A2P08123 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.31■■□□□ 1.16
COL1A2P08123 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL1A2P08123 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.31■■□□□ 1.16
COL1A2P08123 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
COL1A2P08123 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.31■■□□□ 1.16
COL1A2P08123 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.31■■□□□ 1.16
COL1A2P08123 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL1A2P08123 AL121829.2-201ENST00000620908 328 ntBASIC22.31■■□□□ 1.16
COL1A2P08123 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
COL1A2P08123 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL1A2P08123 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL1A2P08123 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.3■■□□□ 1.16
COL1A2P08123 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.3■■□□□ 1.16
COL1A2P08123 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL1A2P08123 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
COL1A2P08123 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.3■■□□□ 1.16
COL1A2P08123 AL596275.1-201ENST00000423464 877 ntBASIC22.3■■□□□ 1.16
COL1A2P08123 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.3■■□□□ 1.16
COL1A2P08123 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms