RNA–Protein interactions for RNA: ENST00000446662.5

SMG1P1-207, Transcript of SMG1 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SMG1P1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P1-207ENST00000446662 NISCHQ9Y2I1 1504 aa48.78■■■■■ 5.4
SMG1P1-207ENST00000446662 CCDC180Q9P1Z9 1646 aa43.62■■■■■ 4.57
SMG1P1-207ENST00000446662 ABCC9O60706 1549 aa43.2■■■■■ 4.51
SMG1P1-207ENST00000446662 RB1CC1Q8TDY2 1594 aa41.37■■■■■ 4.21
SMG1P1-207ENST00000446662 NACADO15069 1562 aa41.2■■■■■ 4.19
SMG1P1-207ENST00000446662 DCAF8L2P0C7V8 631 aa40.96■■■■■ 4.15
SMG1P1-207ENST00000446662 MYO15BQ96JP2 1530 aa40.82■■■■■ 4.12
SMG1P1-207ENST00000446662 ZCCHC6Q5VYS8 1495 aaKnown RBP40.5■■■■■ 4.07
SMG1P1-207ENST00000446662 DCAF1Q9Y4B6 1507 aa40.39■■■■■ 4.06
SMG1P1-207ENST00000446662 UNC13AQ9UPW8 1703 aa40.29■■■■■ 4.04
SMG1P1-207ENST00000446662 PABPN1Q86U42 306 aaKnown RBP eCLIP40.27■■■■■ 4.04
SMG1P1-207ENST00000446662 DNAJC5BQ9UF47 199 aa40.18■■■■■ 4.02
SMG1P1-207ENST00000446662 BICRAQ9NZM4 1560 aa40.07■■■■■ 4.01
SMG1P1-207ENST00000446662 SHROOM4Q9ULL8 1493 aa39.76■■■■□ 3.96
SMG1P1-207ENST00000446662 SCRIBQ14160 1630 aa39.68■■■■□ 3.94
SMG1P1-207ENST00000446662 EIF4G1Q04637 1599 aaKnown RBP39.09■■■■□ 3.85
SMG1P1-207ENST00000446662 CC2D2AQ9P2K1 1620 aa39.07■■■■□ 3.84
SMG1P1-207ENST00000446662 CECR2Q9BXF3 1484 aa38.94■■■■□ 3.82
SMG1P1-207ENST00000446662 NCAPD3P42695 1498 aa38.03■■■■□ 3.68
SMG1P1-207ENST00000446662 SMARCA4P51532 1647 aa37.94■■■■□ 3.66
SMG1P1-207ENST00000446662 ATAD2BQ9ULI0 1458 aa37.92■■■■□ 3.66
SMG1P1-207ENST00000446662 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
SMG1P1-207ENST00000446662 BAZ1AQ9NRL2 1556 aaPredicted RBP37.87■■■■□ 3.65
SMG1P1-207ENST00000446662 HMGXB3Q12766 1538 aa37.77■■■■□ 3.64
SMG1P1-207ENST00000446662 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.62
SMG1P1-207ENST00000446662 BAZ1BQ9UIG0 1483 aaKnown RBP37.58■■■■□ 3.61
SMG1P1-207ENST00000446662 MROH2BQ7Z745 1585 aa37.53■■■■□ 3.6
SMG1P1-207ENST00000446662 ERCC6Q03468 1493 aa37.35■■■■□ 3.57
SMG1P1-207ENST00000446662 CUX2O14529 1486 aa37.21■■■■□ 3.55
SMG1P1-207ENST00000446662 NESP48681 1621 aa37.19■■■■□ 3.54
SMG1P1-207ENST00000446662 LAMC3Q9Y6N6 1575 aa37.1■■■■□ 3.53
SMG1P1-207ENST00000446662 WIZO95785 1651 aa37.05■■■■□ 3.52
SMG1P1-207ENST00000446662 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
SMG1P1-207ENST00000446662 PDS5BQ9NTI5 1447 aa36.92■■■■□ 3.5
SMG1P1-207ENST00000446662 CADPSQ9ULU8 1353 aa36.89■■■■□ 3.5
SMG1P1-207ENST00000446662 THOC2Q8NI27 1593 aaKnown RBP36.78■■■■□ 3.48
SMG1P1-207ENST00000446662 DNAJC5Q9H3Z4 198 aa36.76■■■■□ 3.48
SMG1P1-207ENST00000446662 KIF21AQ7Z4S6 1674 aa36.71■■■■□ 3.47
SMG1P1-207ENST00000446662 TOP2AP11388 1531 aaKnown RBP36.7■■■■□ 3.47
SMG1P1-207ENST00000446662 CFTRP13569 1480 aa36.54■■■■□ 3.44
SMG1P1-207ENST00000446662 MRC2Q9UBG0 1479 aa36.52■■■■□ 3.44
SMG1P1-207ENST00000446662 CEP164Q9UPV0 1460 aa36.45■■■■□ 3.43
SMG1P1-207ENST00000446662 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
SMG1P1-207ENST00000446662 WDR62O43379 1518 aa36.41■■■■□ 3.42
SMG1P1-207ENST00000446662 CCDC88BA6NC98 1476 aa36.26■■■■□ 3.4
SMG1P1-207ENST00000446662 PRDM2Q13029 1718 aa36.13■■■■□ 3.37
SMG1P1-207ENST00000446662 URB2Q14146 1524 aaKnown RBP36.07■■■■□ 3.36
SMG1P1-207ENST00000446662 ABCC8Q09428 1581 aa35.83■■■■□ 3.33
SMG1P1-207ENST00000446662 TOPBP1Q92547 1522 aa35.77■■■■□ 3.32
SMG1P1-207ENST00000446662 IFT140Q96RY7 1462 aa35.73■■■■□ 3.31
SMG1P1-207ENST00000446662 DNMBPQ6XZF7 1577 aa35.68■■■■□ 3.3
SMG1P1-207ENST00000446662 OSCARQ8IYS5 282 aa35.58■■■■□ 3.29
SMG1P1-207ENST00000446662 ZNF608Q9ULD9 1512 aaPredicted RBP35.54■■■■□ 3.28
SMG1P1-207ENST00000446662 SUPT5HO00267 1087 aaKnown RBP35.5■■■■□ 3.27
SMG1P1-207ENST00000446662 POLA1P09884 1462 aaPredicted RBP35.42■■■■□ 3.26
SMG1P1-207ENST00000446662 TARBP1Q13395 1621 aaKnown RBP35.4■■■■□ 3.26
SMG1P1-207ENST00000446662 EIF4G3O43432 1585 aaKnown RBP35.38■■■■□ 3.25
SMG1P1-207ENST00000446662 SOGA1O94964 1423 aa35.3■■■■□ 3.24
SMG1P1-207ENST00000446662 AQRO60306 1485 aaKnown RBP eCLIP35.29■■■■□ 3.24
SMG1P1-207ENST00000446662 CUX1P39880 1505 aa35.26■■■■□ 3.23
SMG1P1-207ENST00000446662 FGD5Q6ZNL6 1462 aa35.24■■■■□ 3.23
SMG1P1-207ENST00000446662 RAD54L2Q9Y4B4 1467 aa35.24■■■■□ 3.23
SMG1P1-207ENST00000446662 TRIM41Q8WV44 630 aa35.21■■■■□ 3.23
SMG1P1-207ENST00000446662 WDR97A6NE52 1622 aa35.19■■■■□ 3.22
SMG1P1-207ENST00000446662 TDRD9Q8NDG6 1382 aaKnown RBP35.14■■■■□ 3.22
SMG1P1-207ENST00000446662 CHD1O14646 1710 aa35.01■■■■□ 3.19
SMG1P1-207ENST00000446662 FBLN2P98095 1184 aa35■■■■□ 3.19
SMG1P1-207ENST00000446662 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
SMG1P1-207ENST00000446662 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.19
SMG1P1-207ENST00000446662 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.19
SMG1P1-207ENST00000446662 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.19
SMG1P1-207ENST00000446662 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
SMG1P1-207ENST00000446662 MAGI1Q96QZ7 1491 aaPredicted RBP34.95■■■■□ 3.19
SMG1P1-207ENST00000446662 ARHGEF11O15085 1522 aa34.92■■■■□ 3.18
SMG1P1-207ENST00000446662 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
SMG1P1-207ENST00000446662 GAPVD1Q14C86 1478 aa34.88■■■■□ 3.17
SMG1P1-207ENST00000446662 WRNQ14191 1432 aaPredicted RBP eCLIP34.88■■■■□ 3.17
SMG1P1-207ENST00000446662 CHMP7Q8WUX9 453 aaPredicted RBP34.86■■■■□ 3.17
SMG1P1-207ENST00000446662 TOP2BQ02880 1626 aa34.82■■■■□ 3.16
SMG1P1-207ENST00000446662 SYNJ2O15056 1496 aa34.81■■■■□ 3.16
SMG1P1-207ENST00000446662 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
SMG1P1-207ENST00000446662 ABCA5Q8WWZ7 1642 aa34.77■■■■□ 3.16
SMG1P1-207ENST00000446662 PBRM1Q86U86 1689 aa34.76■■■■□ 3.15
SMG1P1-207ENST00000446662 SYNJ1O43426 1573 aa34.74■■■■□ 3.15
SMG1P1-207ENST00000446662 CLASP1Q7Z460 1538 aa34.68■■■■□ 3.14
SMG1P1-207ENST00000446662 CYB5RLQ6IPT4 315 aa34.65■■■■□ 3.14
SMG1P1-207ENST00000446662 ARAP1Q96P48 1450 aa34.58■■■■□ 3.13
SMG1P1-207ENST00000446662 ERICH3Q5RHP9 1530 aa34.5■■■■□ 3.11
SMG1P1-207ENST00000446662 GRIN2AQ12879 1464 aa34.49■■■■□ 3.11
SMG1P1-207ENST00000446662 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
SMG1P1-207ENST00000446662 FHAD1B1AJZ9 1412 aa34.47■■■■□ 3.11
SMG1P1-207ENST00000446662 NUP160Q12769 1436 aa34.38■■■■□ 3.09
SMG1P1-207ENST00000446662 CEP170Q5SW79 1584 aa34.29■■■■□ 3.08
SMG1P1-207ENST00000446662 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
SMG1P1-207ENST00000446662 SHROOM2Q13796 1616 aa34.15■■■■□ 3.06
SMG1P1-207ENST00000446662 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
SMG1P1-207ENST00000446662 IGF1RP08069 1367 aa34.12■■■■□ 3.05
SMG1P1-207ENST00000446662 ERCC6L2Q5T890 1561 aa34.08■■■■□ 3.05
SMG1P1-207ENST00000446662 CUL7Q14999 1698 aa34.04■■■■□ 3.04
SMG1P1-207ENST00000446662 JPH4Q96JJ6 628 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms