Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 YEL050W-AYEL050W-A 192 nt1.93□□□□□ -2.1
VPS9P54787 YHR073W-AYHR073W-A 177 nt1.93□□□□□ -2.1
VPS9P54787 YHR214C-CYHR214C-C 1437 nt1.92□□□□□ -2.1
VPS9P54787 YLR149CYLR149C 2193 nt1.92□□□□□ -2.1
VPS9P54787 YDL041WYDL041W 354 nt1.92□□□□□ -2.1
VPS9P54787 YEL057CYEL057C 702 nt1.92□□□□□ -2.1
VPS9P54787 COX13YGL191W 390 nt1.92□□□□□ -2.1
VPS9P54787 RMP1YLR145W 606 nt1.92□□□□□ -2.1
VPS9P54787 IRC16YPR038W 360 nt1.92□□□□□ -2.1
VPS9P54787 YJR039WYJR039W 3366 nt1.92□□□□□ -2.1
VPS9P54787 HIR3YJR140C 4947 nt1.91□□□□□ -2.1
VPS9P54787 SNU56YDR240C 1479 nt1.91□□□□□ -2.1
VPS9P54787 GIC1YHR061C 945 nt1.91□□□□□ -2.1
VPS9P54787 MRPL44YMR225C 297 nt1.91□□□□□ -2.1
VPS9P54787 SGD1YLR336C 2700 nt1.91□□□□□ -2.1
VPS9P54787 AGC1YPR021C 2709 nt1.91□□□□□ -2.1
VPS9P54787 PEX8YGR077C 1770 nt1.9□□□□□ -2.1
VPS9P54787 MON2YNL297C 4911 nt1.9□□□□□ -2.1
VPS9P54787 YHR071C-AYHR071C-A 321 nt1.9□□□□□ -2.11
VPS9P54787 PGA1YNL158W 597 nt1.9□□□□□ -2.11
VPS9P54787 YBL083CYBL083C 426 nt1.9□□□□□ -2.11
VPS9P54787 YBR224WYBR224W 516 nt1.9□□□□□ -2.11
VPS9P54787 REV3YPL167C 4515 nt1.9□□□□□ -2.11
VPS9P54787 MSH6YDR097C 3729 nt1.9□□□□□ -2.11
VPS9P54787 PHR1YOR386W 1698 nt1.9□□□□□ -2.11
VPS9P54787 MNL2YLR057W 2550 nt1.89□□□□□ -2.11
VPS9P54787 snR79snR79 84 nt1.89□□□□□ -2.11
VPS9P54787 EMC4YGL231C 573 nt1.89□□□□□ -2.11
VPS9P54787 CMC2YBL059C-A 330 nt1.89□□□□□ -2.11
VPS9P54787 YOR392WYOR392W 444 nt1.89□□□□□ -2.11
VPS9P54787 SVS1YPL163C 783 nt1.89□□□□□ -2.11
VPS9P54787 DIS3YOL021C 3006 nt1.89□□□□□ -2.11
VPS9P54787 NUP120YKL057C 3114 nt1.88□□□□□ -2.11
VPS9P54787 SPR3YGR059W 1539 nt1.88□□□□□ -2.11
VPS9P54787 TUS1YLR425W 3924 nt1.88□□□□□ -2.11
VPS9P54787 YER188C-AYER188C-A 300 nt1.88□□□□□ -2.11
VPS9P54787 YKL068W-AYKL068W-A 237 nt1.88□□□□□ -2.11
VPS9P54787 CTK3YML112W 891 nt1.88□□□□□ -2.11
VPS9P54787 TIF11YMR260C 462 nt1.88□□□□□ -2.11
VPS9P54787 YMR272W-BYMR272W-B 108 nt1.88□□□□□ -2.11
VPS9P54787 VPS34YLR240W 2628 nt1.88□□□□□ -2.11
VPS9P54787 DAS1YJL149W 1992 nt1.88□□□□□ -2.11
VPS9P54787 RBK1YCR036W 1002 nt1.87□□□□□ -2.11
VPS9P54787 YCR043CYCR043C 384 nt1.87□□□□□ -2.11
VPS9P54787 RPA34YJL148W 702 nt1.87□□□□□ -2.11
VPS9P54787 PKR1YMR123W 369 nt1.87□□□□□ -2.11
VPS9P54787 SLM1YIL105C 2061 nt1.86□□□□□ -2.11
VPS9P54787 MET32YDR253C 576 nt1.86□□□□□ -2.11
VPS9P54787 SMB1YER029C 591 nt1.86□□□□□ -2.11
VPS9P54787 YPR153WYPR153W 423 nt1.86□□□□□ -2.11
VPS9P54787 RPL31AYDL075W 342 nt1.85□□□□□ -2.11
VPS9P54787 YER068C-AYER068C-A 432 nt1.85□□□□□ -2.11
VPS9P54787 IES5YER092W 378 nt1.85□□□□□ -2.11
VPS9P54787 CIC1YHR052W 1131 nt1.85□□□□□ -2.11
VPS9P54787 STE18YJR086W 333 nt1.85□□□□□ -2.11
VPS9P54787 SLM6YBR266C 453 nt1.85□□□□□ -2.11
VPS9P54787 PKH3YDR466W 2697 nt1.85□□□□□ -2.11
VPS9P54787 PEP3YLR148W 2757 nt1.85□□□□□ -2.11
VPS9P54787 MYO2YOR326W 4725 nt1.84□□□□□ -2.11
VPS9P54787 PET123YOR158W 957 nt1.84□□□□□ -2.11
VPS9P54787 SEC63YOR254C 1992 nt1.84□□□□□ -2.11
VPS9P54787 TFC8YPL007C 1767 nt1.84□□□□□ -2.12
VPS9P54787 ZRG8YER033C 3231 nt1.84□□□□□ -2.12
VPS9P54787 YER121WYER121W 345 nt1.83□□□□□ -2.12
VPS9P54787 snR189snR189 189 nt1.83□□□□□ -2.12
VPS9P54787 YLR035C-AYLR035C-A 3468 nt1.83□□□□□ -2.12
VPS9P54787 SHE9YDR393W 1371 nt1.83□□□□□ -2.12
VPS9P54787 YBR012W-AYBR012W-A 1323 nt1.82□□□□□ -2.12
VPS9P54787 YOR142W-AYOR142W-A 1323 nt1.82□□□□□ -2.12
VPS9P54787 YPR158W-AYPR158W-A 1323 nt1.82□□□□□ -2.12
VPS9P54787 CDC24YAL041W 2565 nt1.82□□□□□ -2.12
VPS9P54787 TBS1YBR150C 3285 nt1.81□□□□□ -2.12
VPS9P54787 PPN1YDR452W 2025 nt1.81□□□□□ -2.12
VPS9P54787 YCR102W-AYCR102W-A 198 nt1.81□□□□□ -2.12
VPS9P54787 YHR210CYHR210C 1026 nt1.81□□□□□ -2.12
VPS9P54787 ASM4YDL088C 1587 nt1.81□□□□□ -2.12
VPS9P54787 YLR419WYLR419W 4308 nt1.8□□□□□ -2.12
VPS9P54787 RTP1YMR185W 2946 nt1.8□□□□□ -2.12
VPS9P54787 PAU3YCR104W 375 nt1.8□□□□□ -2.12
VPS9P54787 YGL024WYGL024W 336 nt1.8□□□□□ -2.12
VPS9P54787 TRX1YLR043C 312 nt1.8□□□□□ -2.12
VPS9P54787 YBR071WYBR071W 636 nt1.8□□□□□ -2.12
VPS9P54787 SEY1YOR165W 2331 nt1.8□□□□□ -2.12
VPS9P54787 SMY1YKL079W 1971 nt1.79□□□□□ -2.12
VPS9P54787 MSC6YOR354C 2079 nt1.79□□□□□ -2.12
VPS9P54787 LHS1YKL073W 2646 nt1.79□□□□□ -2.12
VPS9P54787 tT(UGU)HtT(UGU)H 72 nt1.79□□□□□ -2.12
VPS9P54787 CRG1YHR209W 876 nt1.79□□□□□ -2.12
VPS9P54787 YLR255CYLR255C 354 nt1.79□□□□□ -2.12
VPS9P54787 SNF5YBR289W 2718 nt1.78□□□□□ -2.12
VPS9P54787 YGR250CYGR250C 2346 nt1.78□□□□□ -2.12
VPS9P54787 CFT1YDR301W 4074 nt1.78□□□□□ -2.12
VPS9P54787 YER088C-AYER088C-A 324 nt1.78□□□□□ -2.12
VPS9P54787 RPL9AYGL147C 576 nt1.78□□□□□ -2.12
VPS9P54787 YAP3YHL009C 993 nt1.78□□□□□ -2.12
VPS9P54787 YNL303WYNL303W 348 nt1.78□□□□□ -2.12
VPS9P54787 YOL159C-AYOL159C-A 273 nt1.78□□□□□ -2.12
VPS9P54787 SAR1YPL218W 573 nt1.78□□□□□ -2.12
VPS9P54787 YPR039WYPR039W 336 nt1.78□□□□□ -2.12
VPS9P54787 YPR146CYPR146C 330 nt1.78□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 53 ms