Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	AIM26	YKL037W	357 nt		2.67	□□□□□ -1.98
CAF16	P43569	CBF2	YGR140W	2871 nt		2.67	□□□□□ -1.98
CAF16	P43569	ALK2	YBL009W	2031 nt		2.67	□□□□□ -1.98
CAF16	P43569	YNL018C	YNL018C	1839 nt		2.67	□□□□□ -1.98
CAF16	P43569	OST1	YJL002C	1431 nt		2.67	□□□□□ -1.98
CAF16	P43569	SMY1	YKL079W	1971 nt		2.67	□□□□□ -1.98
CAF16	P43569	OSH6	YKR003W	1347 nt		2.67	□□□□□ -1.98
CAF16	P43569	CRM1	YGR218W	3255 nt		2.66	□□□□□ -1.98
CAF16	P43569	YHL041W	YHL041W	450 nt		2.66	□□□□□ -1.98
CAF16	P43569	EMC6	YLL014W	327 nt		2.66	□□□□□ -1.98
CAF16	P43569	YLR154W-E	YLR154W-E	204 nt		2.66	□□□□□ -1.98
CAF16	P43569	HTB2	YBL002W	396 nt		2.66	□□□□□ -1.98
CAF16	P43569	YBR224W	YBR224W	516 nt		2.66	□□□□□ -1.98
CAF16	P43569	MDM1	YML104C	3384 nt		2.66	□□□□□ -1.98
CAF16	P43569	YIL080W	YIL080W	4722 nt		2.66	□□□□□ -1.98
CAF16	P43569	GUP1	YGL084C	1683 nt		2.66	□□□□□ -1.98
CAF16	P43569	LYS9	YNR050C	1341 nt		2.66	□□□□□ -1.98
CAF16	P43569	MTC3	YGL226W	372 nt		2.65	□□□□□ -1.99
CAF16	P43569	RPA34	YJL148W	702 nt		2.65	□□□□□ -1.99
CAF16	P43569	RPL6A	YML073C	531 nt		2.65	□□□□□ -1.99
CAF16	P43569	YLR149C	YLR149C	2193 nt		2.65	□□□□□ -1.99
CAF16	P43569	TMN3	YER113C	2121 nt		2.65	□□□□□ -1.99
CAF16	P43569	SWR1	YDR334W	4545 nt		2.65	□□□□□ -1.99
CAF16	P43569	RPL22A	YLR061W	366 nt		2.64	□□□□□ -1.99
CAF16	P43569	SAR1	YPL218W	573 nt		2.64	□□□□□ -1.99
CAF16	P43569	snR51	snR51	107 nt		2.64	□□□□□ -1.99
CAF16	P43569	CDC27	YBL084C	2277 nt		2.64	□□□□□ -1.99
CAF16	P43569	SEF1	YBL066C	3447 nt		2.64	□□□□□ -1.99
CAF16	P43569	YBR184W	YBR184W	1572 nt		2.64	□□□□□ -1.99
CAF16	P43569	ILS1	YBL076C	3219 nt		2.64	□□□□□ -1.99
CAF16	P43569	BNR1	YIL159W	4128 nt		2.63	□□□□□ -1.99
CAF16	P43569	PEP3	YLR148W	2757 nt		2.63	□□□□□ -1.99
CAF16	P43569	YDR048C	YDR048C	315 nt		2.63	□□□□□ -1.99
CAF16	P43569	SUP56	tL(CAA)A	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	SUP53	tL(CAA)C	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	tL(CAA)D	tL(CAA)D	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	tL(CAA)G1	tL(CAA)G1	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	SUP54	tL(CAA)G2	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	tL(CAA)G3	tL(CAA)G3	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	tL(CAA)K	tL(CAA)K	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	tL(CAA)L	tL(CAA)L	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	tL(CAA)M	tL(CAA)M	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	tL(CAA)N	tL(CAA)N	82 nt		2.63	□□□□□ -1.99
CAF16	P43569	SPO22	YIL073C	2928 nt		2.62	□□□□□ -1.99
CAF16	P43569	MRD1	YPR112C	2664 nt		2.62	□□□□□ -1.99
CAF16	P43569	HTL1	YCR020W-B	237 nt		2.62	□□□□□ -1.99
CAF16	P43569	RPL36B	YPL249C-A	303 nt		2.62	□□□□□ -1.99
CAF16	P43569	SWA2	YDR320C	2007 nt		2.62	□□□□□ -1.99
CAF16	P43569	AKR1	YDR264C	2295 nt		2.62	□□□□□ -1.99
CAF16	P43569	ECM29	YHL030W	5607 nt		2.62	□□□□□ -1.99
CAF16	P43569	BPT1	YLL015W	4680 nt		2.62	□□□□□ -1.99
CAF16	P43569	PEX8	YGR077C	1770 nt		2.61	□□□□□ -1.99
CAF16	P43569	SMY2	YBR172C	2223 nt		2.61	□□□□□ -1.99
CAF16	P43569	STE6	YKL209C	3873 nt		2.61	□□□□□ -1.99
CAF16	P43569	SCH9	YHR205W	2475 nt		2.61	□□□□□ -1.99
CAF16	P43569	LCL1	YPL056C	306 nt		2.61	□□□□□ -1.99
CAF16	P43569	YPL152W-A	YPL152W-A	99 nt		2.61	□□□□□ -1.99
CAF16	P43569	MF(ALPHA)1	YPL187W	498 nt		2.61	□□□□□ -1.99
CAF16	P43569	VPH1	YOR270C	2523 nt		2.61	□□□□□ -1.99
CAF16	P43569	MNL2	YLR057W	2550 nt		2.6	□□□□□ -1.99
CAF16	P43569	RIM20	YOR275C	1986 nt		2.6	□□□□□ -1.99
CAF16	P43569	YER079C-A	YER079C-A	339 nt		2.6	□□□□□ -1.99
CAF16	P43569	PRE4	YFR050C	801 nt		2.6	□□□□□ -1.99
CAF16	P43569	HHT1	YBR010W	411 nt		2.6	□□□□□ -1.99
CAF16	P43569	STB4	YMR019W	2850 nt		2.6	□□□□□ -1.99
CAF16	P43569	CDC53	YDL132W	2448 nt		2.6	□□□□□ -1.99
CAF16	P43569	NMD2	YHR077C	3270 nt		2.59	□□□□□ -1.99
CAF16	P43569	YOP1	YPR028W	543 nt		2.59	□□□□□ -1.99
CAF16	P43569	VMR1	YHL035C	4779 nt		2.59	□□□□□ -2
CAF16	P43569	SRB8	YCR081W	4284 nt		2.58	□□□□□ -2
CAF16	P43569	tK(UUU)D	tK(UUU)D	73 nt		2.58	□□□□□ -2
CAF16	P43569	tK(UUU)G1	tK(UUU)G1	73 nt		2.58	□□□□□ -2
CAF16	P43569	tK(UUU)G2	tK(UUU)G2	73 nt		2.58	□□□□□ -2
CAF16	P43569	tK(UUU)K	tK(UUU)K	73 nt		2.58	□□□□□ -2
CAF16	P43569	tK(UUU)L	tK(UUU)L	73 nt		2.58	□□□□□ -2
CAF16	P43569	tK(UUU)O	tK(UUU)O	73 nt		2.58	□□□□□ -2
CAF16	P43569	tK(UUU)P	tK(UUU)P	73 nt		2.58	□□□□□ -2
CAF16	P43569	YJL015C	YJL015C	285 nt		2.58	□□□□□ -2
CAF16	P43569	MCM22	YJR135C	720 nt		2.58	□□□□□ -2
CAF16	P43569	YMR122W-A	YMR122W-A	255 nt		2.58	□□□□□ -2
CAF16	P43569	RPS12	YOR369C	432 nt		2.58	□□□□□ -2
CAF16	P43569	DAD3	YBR233W-A	285 nt		2.58	□□□□□ -2
CAF16	P43569	KEL2	YGR238C	2649 nt		2.58	□□□□□ -2
CAF16	P43569	SLH1	YGR271W	5904 nt		2.58	□□□□□ -2
CAF16	P43569	DBP6	YNR038W	1890 nt		2.57	□□□□□ -2
CAF16	P43569	YDR209C	YDR209C	414 nt		2.57	□□□□□ -2
CAF16	P43569	YGL063C-A	YGL063C-A	150 nt		2.57	□□□□□ -2
CAF16	P43569	RPS22A	YJL190C	393 nt		2.57	□□□□□ -2
CAF16	P43569	RPL38	YLR325C	237 nt		2.57	□□□□□ -2
CAF16	P43569	RPS29A	YLR388W	171 nt		2.57	□□□□□ -2
CAF16	P43569	HDA3	YPR179C	1968 nt		2.57	□□□□□ -2
CAF16	P43569	YDR098C-B	YDR098C-B	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YDR210C-D	YDR210C-D	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YDR316W-B	YDR316W-B	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YDR365W-B	YDR365W-B	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YER138C	YER138C	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YER160C	YER160C	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YGR038C-B	YGR038C-B	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YGR161C-D	YGR161C-D	5268 nt		2.57	□□□□□ -2
CAF16	P43569	YJR027W	YJR027W	5268 nt		2.57	□□□□□ -2

Retrieved 100 of 7,029 protein–RNA pairs in 138.5 ms