Protein–RNA interactions for Protein: P40003

VAB2, Biogenesis of lysosome-related organelles complex 1 subunit VAB2, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAB2P40003 LAA1YJL207C 6045 nt1.66□□□□□ -2.14
VAB2P40003 CRM1YGR218W 3255 nt1.66□□□□□ -2.14
VAB2P40003 VMR1YHL035C 4779 nt1.66□□□□□ -2.14
VAB2P40003 UTP21YLR409C 2820 nt1.66□□□□□ -2.14
VAB2P40003 PKH3YDR466W 2697 nt1.65□□□□□ -2.14
VAB2P40003 NAM7YMR080C 2916 nt1.65□□□□□ -2.14
VAB2P40003 YER175W-AYER175W-A 165 nt1.65□□□□□ -2.15
VAB2P40003 YIL029CYIL029C 429 nt1.65□□□□□ -2.15
VAB2P40003 YLR271WYLR271W 825 nt1.65□□□□□ -2.15
VAB2P40003 YML003WYML003W 873 nt1.65□□□□□ -2.15
VAB2P40003 RPB11YOL005C 363 nt1.65□□□□□ -2.15
VAB2P40003 SYH1YPL105C 2550 nt1.64□□□□□ -2.15
VAB2P40003 UTP13YLR222C 2454 nt1.64□□□□□ -2.15
VAB2P40003 SAR1YPL218W 573 nt1.64□□□□□ -2.15
VAB2P40003 SEF1YBL066C 3447 nt1.64□□□□□ -2.15
VAB2P40003 SKI3YPR189W 4299 nt1.64□□□□□ -2.15
VAB2P40003 NUP82YJL061W 2142 nt1.63□□□□□ -2.15
VAB2P40003 YDL068WYDL068W 330 nt1.63□□□□□ -2.15
VAB2P40003 HNT1YDL125C 477 nt1.63□□□□□ -2.15
VAB2P40003 YDR286CYDR286C 345 nt1.63□□□□□ -2.15
VAB2P40003 VOA1YGR106C 798 nt1.63□□□□□ -2.15
VAB2P40003 SPC1YJR010C-A 285 nt1.63□□□□□ -2.15
VAB2P40003 TEN1YLR010C 483 nt1.63□□□□□ -2.15
VAB2P40003 YMR052C-AYMR052C-A 366 nt1.63□□□□□ -2.15
VAB2P40003 YNR025CYNR025C 360 nt1.63□□□□□ -2.15
VAB2P40003 YPL197CYPL197C 414 nt1.63□□□□□ -2.15
VAB2P40003 IML1YJR138W 4755 nt1.63□□□□□ -2.15
VAB2P40003 TDA9YML081W 3756 nt1.62□□□□□ -2.15
VAB2P40003 SPO22YIL073C 2928 nt1.62□□□□□ -2.15
VAB2P40003 YDL062WYDL062W 426 nt1.62□□□□□ -2.15
VAB2P40003 YDR029WYDR029W 315 nt1.62□□□□□ -2.15
VAB2P40003 ROX1YPR065W 1107 nt1.62□□□□□ -2.15
VAB2P40003 STB4YMR019W 2850 nt1.62□□□□□ -2.15
VAB2P40003 COG4YPR105C 2586 nt1.61□□□□□ -2.15
VAB2P40003 RIC1YLR039C 3171 nt1.61□□□□□ -2.15
VAB2P40003 RTR2YDR066C 591 nt1.61□□□□□ -2.15
VAB2P40003 PRM8YGL053W 714 nt1.61□□□□□ -2.15
VAB2P40003 RPI1YIL119C 1224 nt1.61□□□□□ -2.15
VAB2P40003 MRPL44YMR225C 297 nt1.61□□□□□ -2.15
VAB2P40003 SNC2YOR327C 348 nt1.61□□□□□ -2.15
VAB2P40003 YOR394C-AYOR394C-A 168 nt1.61□□□□□ -2.15
VAB2P40003 RTC6YPL183W-A 282 nt1.61□□□□□ -2.15
VAB2P40003 YOR343W-AYOR343W-A 1317 nt1.61□□□□□ -2.15
VAB2P40003 VPS35YJL154C 2835 nt1.61□□□□□ -2.15
VAB2P40003 APL2YKL135C 2181 nt1.6□□□□□ -2.15
VAB2P40003 YEL018C-AYEL018C-A 534 nt1.6□□□□□ -2.15
VAB2P40003 YJR140W-AYJR140W-A 150 nt1.6□□□□□ -2.15
VAB2P40003 YKL111CYKL111C 336 nt1.6□□□□□ -2.15
VAB2P40003 YCR087C-AYCR087C-A 462 nt1.59□□□□□ -2.15
VAB2P40003 YER121WYER121W 345 nt1.59□□□□□ -2.15
VAB2P40003 NCE101YJL205C 162 nt1.59□□□□□ -2.15
VAB2P40003 BER1YLR412W 825 nt1.59□□□□□ -2.15
VAB2P40003 MUD2YKL074C 1584 nt1.59□□□□□ -2.16
VAB2P40003 YDL016CYDL016C 303 nt1.58□□□□□ -2.16
VAB2P40003 snR84snR84 550 nt1.58□□□□□ -2.16
VAB2P40003 LSO2YGR169C-A 279 nt1.58□□□□□ -2.16
VAB2P40003 HSK3YKL138C-A 210 nt1.58□□□□□ -2.16
VAB2P40003 YMR324CYMR324C 243 nt1.58□□□□□ -2.16
VAB2P40003 RPH1YER169W 2391 nt1.58□□□□□ -2.16
VAB2P40003 CDC27YBL084C 2277 nt1.57□□□□□ -2.16
VAB2P40003 GRR1YJR090C 3456 nt1.57□□□□□ -2.16
VAB2P40003 tH(GUG)E1tH(GUG)E1 72 nt1.57□□□□□ -2.16
VAB2P40003 tH(GUG)E2tH(GUG)E2 72 nt1.57□□□□□ -2.16
VAB2P40003 tH(GUG)G1tH(GUG)G1 72 nt1.57□□□□□ -2.16
VAB2P40003 tH(GUG)G2tH(GUG)G2 72 nt1.57□□□□□ -2.16
VAB2P40003 tH(GUG)HtH(GUG)H 72 nt1.57□□□□□ -2.16
VAB2P40003 tH(GUG)KtH(GUG)K 72 nt1.57□□□□□ -2.16
VAB2P40003 tH(GUG)MtH(GUG)M 72 nt1.57□□□□□ -2.16
VAB2P40003 YGL069CYGL069C 465 nt1.57□□□□□ -2.16
VAB2P40003 UBX4YMR067C 1251 nt1.57□□□□□ -2.16
VAB2P40003 ADR1YDR216W 3972 nt1.57□□□□□ -2.16
VAB2P40003 PAC1YOR269W 1485 nt1.56□□□□□ -2.16
VAB2P40003 PIK1YNL267W 3201 nt1.56□□□□□ -2.16
VAB2P40003 tT(UGU)Q1tT(UGU)Q1 76 nt1.56□□□□□ -2.16
VAB2P40003 ILM1YJR118C 612 nt1.56□□□□□ -2.16
VAB2P40003 YJR141WYJR141W 1044 nt1.56□□□□□ -2.16
VAB2P40003 IRC19YLL033W 693 nt1.56□□□□□ -2.16
VAB2P40003 TRX1YLR043C 312 nt1.56□□□□□ -2.16
VAB2P40003 SEC22YLR268W 645 nt1.56□□□□□ -2.16
VAB2P40003 COX7YMR256C 183 nt1.56□□□□□ -2.16
VAB2P40003 SPR3YGR059W 1539 nt1.56□□□□□ -2.16
VAB2P40003 MNL2YLR057W 2550 nt1.55□□□□□ -2.16
VAB2P40003 NOT5YPR072W 1683 nt1.55□□□□□ -2.16
VAB2P40003 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
VAB2P40003 SMB1YER029C 591 nt1.55□□□□□ -2.16
VAB2P40003 BUD19YJL188C 309 nt1.55□□□□□ -2.16
VAB2P40003 SEN15YMR059W 387 nt1.55□□□□□ -2.16
VAB2P40003 PKR1YMR123W 369 nt1.55□□□□□ -2.16
VAB2P40003 SPC29YPL124W 762 nt1.55□□□□□ -2.16
VAB2P40003 YPL238CYPL238C 390 nt1.55□□□□□ -2.16
VAB2P40003 GPX2YBR244W 489 nt1.55□□□□□ -2.16
VAB2P40003 YDR210W-AYDR210W-A 1317 nt1.55□□□□□ -2.16
VAB2P40003 KAR3YPR141C 2190 nt1.55□□□□□ -2.16
VAB2P40003 PHR1YOR386W 1698 nt1.55□□□□□ -2.16
VAB2P40003 YJR039WYJR039W 3366 nt1.55□□□□□ -2.16
VAB2P40003 MSH6YDR097C 3729 nt1.54□□□□□ -2.16
VAB2P40003 MET32YDR253C 576 nt1.54□□□□□ -2.16
VAB2P40003 EMC4YGL231C 573 nt1.54□□□□□ -2.16
VAB2P40003 GIC1YHR061C 945 nt1.54□□□□□ -2.16
VAB2P40003 YKL044WYKL044W 321 nt1.54□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 59.5 ms