Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SFTPBP07988 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SFTPBP07988 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SFTPBP07988 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SFTPBP07988 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.57■□□□□ 0.4
SFTPBP07988 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 POU5F1P4-201ENST00000413175 1085 ntBASIC17.57■□□□□ 0.4
SFTPBP07988 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.57■□□□□ 0.4
SFTPBP07988 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.57■□□□□ 0.4
SFTPBP07988 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.57■□□□□ 0.4
SFTPBP07988 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.57■□□□□ 0.4
SFTPBP07988 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.57■□□□□ 0.4
SFTPBP07988 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.57■□□□□ 0.4
SFTPBP07988 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SFTPBP07988 AC137761.2-201ENST00000561729 223 ntBASIC17.57■□□□□ 0.4
SFTPBP07988 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.57■□□□□ 0.4
SFTPBP07988 AC145350.3-201ENST00000569033 163 ntBASIC17.57■□□□□ 0.4
SFTPBP07988 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.57■□□□□ 0.4
SFTPBP07988 AC027702.1-201ENST00000563810 1770 ntBASIC17.57■□□□□ 0.4
SFTPBP07988 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SFTPBP07988 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SFTPBP07988 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SFTPBP07988 AC011484.1-201ENST00000377652 1995 ntBASIC17.57■□□□□ 0.4
SFTPBP07988 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.56■□□□□ 0.4
SFTPBP07988 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.56■□□□□ 0.4
SFTPBP07988 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SFTPBP07988 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SFTPBP07988 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SFTPBP07988 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.56■□□□□ 0.4
SFTPBP07988 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.56■□□□□ 0.4
SFTPBP07988 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.56■□□□□ 0.4
SFTPBP07988 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 FP700111.2-201ENST00000619190 1892 ntBASIC17.56■□□□□ 0.4
SFTPBP07988 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SFTPBP07988 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SFTPBP07988 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.55■□□□□ 0.4
SFTPBP07988 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SFTPBP07988 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.55■□□□□ 0.4
SFTPBP07988 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SFTPBP07988 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.55■□□□□ 0.4
SFTPBP07988 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.55■□□□□ 0.4
SFTPBP07988 AC138907.5-202ENST00000569484 235 ntBASIC17.55■□□□□ 0.4
SFTPBP07988 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
SFTPBP07988 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.55■□□□□ 0.4
SFTPBP07988 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SFTPBP07988 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.55■□□□□ 0.4
SFTPBP07988 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SFTPBP07988 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms