Protein–RNA interactions for Protein: P04183

TK1, Thymidine kinase, cytosolic, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TK1P04183 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.28■□□□□ 0.36
TK1P04183 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.28■□□□□ 0.36
TK1P04183 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.28■□□□□ 0.36
TK1P04183 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TK1P04183 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TK1P04183 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.28■□□□□ 0.36
TK1P04183 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TK1P04183 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TK1P04183 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TK1P04183 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TK1P04183 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TK1P04183 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TK1P04183 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TK1P04183 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TK1P04183 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.27■□□□□ 0.36
TK1P04183 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.27■□□□□ 0.36
TK1P04183 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
TK1P04183 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TK1P04183 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TK1P04183 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.27■□□□□ 0.36
TK1P04183 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TK1P04183 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TK1P04183 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.27■□□□□ 0.36
TK1P04183 AC016769.1-201ENST00000409132 1010 ntBASIC17.27■□□□□ 0.36
TK1P04183 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.27■□□□□ 0.36
TK1P04183 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TK1P04183 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TK1P04183 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TK1P04183 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.27■□□□□ 0.35
TK1P04183 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TK1P04183 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.27■□□□□ 0.35
TK1P04183 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TK1P04183 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TK1P04183 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TK1P04183 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.26■□□□□ 0.35
TK1P04183 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.26■□□□□ 0.35
TK1P04183 AC027702.1-201ENST00000563810 1770 ntBASIC17.26■□□□□ 0.35
TK1P04183 AC020907.5-201ENST00000624372 1936 ntBASIC17.26■□□□□ 0.35
TK1P04183 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TK1P04183 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TK1P04183 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.26■□□□□ 0.35
TK1P04183 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.26■□□□□ 0.35
TK1P04183 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.26■□□□□ 0.35
TK1P04183 AC243732.1-201ENST00000612648 864 ntBASIC17.26■□□□□ 0.35
TK1P04183 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.26■□□□□ 0.35
TK1P04183 RBM17P2-201ENST00000616397 1405 ntBASIC17.26■□□□□ 0.35
TK1P04183 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.26■□□□□ 0.35
TK1P04183 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TK1P04183 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.26■□□□□ 0.35
TK1P04183 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TK1P04183 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TK1P04183 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TK1P04183 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TK1P04183 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.25■□□□□ 0.35
TK1P04183 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.25■□□□□ 0.35
TK1P04183 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.25■□□□□ 0.35
TK1P04183 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.25■□□□□ 0.35
TK1P04183 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.25■□□□□ 0.35
TK1P04183 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TK1P04183 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TK1P04183 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TK1P04183 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TK1P04183 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TK1P04183 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TK1P04183 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TK1P04183 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TK1P04183 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TK1P04183 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TK1P04183 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TK1P04183 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TK1P04183 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TK1P04183 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
TK1P04183 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TK1P04183 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms