Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHAC2Q9Y5I4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHAC2Q9Y5I4 AC124283.5-201ENST00000624661 1809 ntBASIC24.4■■□□□ 1.5
PCDHAC2Q9Y5I4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHAC2Q9Y5I4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.39■■□□□ 1.5
PCDHAC2Q9Y5I4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.39■■□□□ 1.5
PCDHAC2Q9Y5I4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDHAC2Q9Y5I4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
PCDHAC2Q9Y5I4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHAC2Q9Y5I4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.39■■□□□ 1.5
PCDHAC2Q9Y5I4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 AL355075.4-201ENST00000554988 638 ntBASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHAC2Q9Y5I4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 LINC01023-201ENST00000606054 436 ntBASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHAC2Q9Y5I4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHAC2Q9Y5I4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 AC087499.1-201ENST00000418141 1075 ntBASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 AC010331.1-201ENST00000611423 582 ntBASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHAC2Q9Y5I4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 PGM5P4-201ENST00000421970 445 ntBASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 PRKY-204ENST00000533551 1019 ntBASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 AC133561.5-201ENST00000635547 218 ntBASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 ECEL1P1-201ENST00000373592 1742 ntBASIC24.35■■□□□ 1.49
PCDHAC2Q9Y5I4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 AL390719.1-204ENST00000412397 1219 ntBASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 KRT17P2-201ENST00000300992 1314 ntBASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PCDHAC2Q9Y5I4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHAC2Q9Y5I4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHAC2Q9Y5I4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHAC2Q9Y5I4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHAC2Q9Y5I4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms