Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ODF4Q2M2E3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.97■□□□□ 0.47
ODF4Q2M2E3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ODF4Q2M2E3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ODF4Q2M2E3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.97■□□□□ 0.47
ODF4Q2M2E3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 SUDS3P1-201ENST00000505831 966 ntBASIC17.96■□□□□ 0.47
ODF4Q2M2E3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ODF4Q2M2E3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.96■□□□□ 0.46
ODF4Q2M2E3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ODF4Q2M2E3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 KRT87P-202ENST00000534226 1464 ntBASIC17.95■□□□□ 0.46
ODF4Q2M2E3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 AL162377.1-201ENST00000618844 1793 ntBASIC17.95■□□□□ 0.46
ODF4Q2M2E3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 AC142381.2-201ENST00000566120 298 ntBASIC17.95■□□□□ 0.46
ODF4Q2M2E3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ODF4Q2M2E3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 AC092720.2-201ENST00000602388 1665 ntBASIC17.94■□□□□ 0.46
ODF4Q2M2E3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 POU5F1P4-201ENST00000413175 1085 ntBASIC17.94■□□□□ 0.46
ODF4Q2M2E3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 AL358852.1-201ENST00000623174 1268 ntBASIC17.94■□□□□ 0.46
ODF4Q2M2E3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ODF4Q2M2E3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ODF4Q2M2E3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms