Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 RPB5YBR154C 648 nt2.34□□□□□ -2.03
VPS38Q05919 snR54snR54 86 nt2.34□□□□□ -2.03
VPS38Q05919 RNH70YGR276C 1662 nt2.34□□□□□ -2.04
VPS38Q05919 UTP22YGR090W 3714 nt2.33□□□□□ -2.04
VPS38Q05919 YBL005W-BYBL005W-B 5268 nt2.33□□□□□ -2.04
VPS38Q05919 HMLALPHA2YCL067C 633 nt2.33□□□□□ -2.04
VPS38Q05919 MATALPHA2YCR039C 633 nt2.33□□□□□ -2.04
VPS38Q05919 RPL27BYDR471W 411 nt2.33□□□□□ -2.04
VPS38Q05919 YER188C-AYER188C-A 300 nt2.33□□□□□ -2.04
VPS38Q05919 YKL202WYKL202W 582 nt2.33□□□□□ -2.04
VPS38Q05919 ROX1YPR065W 1107 nt2.33□□□□□ -2.04
VPS38Q05919 APL5YPL195W 2799 nt2.33□□□□□ -2.04
VPS38Q05919 YJL016WYJL016W 1686 nt2.33□□□□□ -2.04
VPS38Q05919 MCD1YDL003W 1701 nt2.33□□□□□ -2.04
VPS38Q05919 BRE1YDL074C 2103 nt2.33□□□□□ -2.04
VPS38Q05919 MSL5YLR116W 1431 nt2.33□□□□□ -2.04
VPS38Q05919 EDS1YBR033W 2760 nt2.32□□□□□ -2.04
VPS38Q05919 NUP100YKL068W 2880 nt2.32□□□□□ -2.04
VPS38Q05919 IPT1YDR072C 1584 nt2.32□□□□□ -2.04
VPS38Q05919 UBP15YMR304W 3693 nt2.32□□□□□ -2.04
VPS38Q05919 YDR194W-AYDR194W-A 153 nt2.32□□□□□ -2.04
VPS38Q05919 GCN4YEL009C 846 nt2.32□□□□□ -2.04
VPS38Q05919 YFL019CYFL019C 354 nt2.32□□□□□ -2.04
VPS38Q05919 PET191YJR034W 327 nt2.32□□□□□ -2.04
VPS38Q05919 TEN1YLR010C 483 nt2.32□□□□□ -2.04
VPS38Q05919 YLR269CYLR269C 351 nt2.32□□□□□ -2.04
VPS38Q05919 YPR177CYPR177C 372 nt2.32□□□□□ -2.04
VPS38Q05919 PPN1YDR452W 2025 nt2.32□□□□□ -2.04
VPS38Q05919 SPP41YDR464W 4308 nt2.31□□□□□ -2.04
VPS38Q05919 UBP2YOR124C 3819 nt2.31□□□□□ -2.04
VPS38Q05919 VTC3YPL019C 2508 nt2.31□□□□□ -2.04
VPS38Q05919 YDL032WYDL032W 312 nt2.31□□□□□ -2.04
VPS38Q05919 YFH1YDL120W 525 nt2.31□□□□□ -2.04
VPS38Q05919 MZM1YDR493W 372 nt2.31□□□□□ -2.04
VPS38Q05919 YGR042WYGR042W 816 nt2.31□□□□□ -2.04
VPS38Q05919 YKL063CYKL063C 504 nt2.31□□□□□ -2.04
VPS38Q05919 VOA1YGR106C 798 nt2.3□□□□□ -2.04
VPS38Q05919 YHR214W-AYHR214W-A 486 nt2.3□□□□□ -2.04
VPS38Q05919 PAU8YAL068C 363 nt2.3□□□□□ -2.04
VPS38Q05919 YAR068WYAR068W 486 nt2.3□□□□□ -2.04
VPS38Q05919 YNL010WYNL010W 726 nt2.3□□□□□ -2.04
VPS38Q05919 PAU20YOL161C 363 nt2.3□□□□□ -2.04
VPS38Q05919 GDS1YOR355W 1569 nt2.3□□□□□ -2.04
VPS38Q05919 SCH9YHR205W 2475 nt2.3□□□□□ -2.04
VPS38Q05919 IRA2YOL081W 9240 nt2.3□□□□□ -2.04
VPS38Q05919 ALK2YBL009W 2031 nt2.29□□□□□ -2.04
VPS38Q05919 VPS52YDR484W 1926 nt2.29□□□□□ -2.04
VPS38Q05919 NBL1YHR199C-A 222 nt2.29□□□□□ -2.04
VPS38Q05919 GRX8YLR364W 330 nt2.29□□□□□ -2.04
VPS38Q05919 YMR153C-AYMR153C-A 336 nt2.29□□□□□ -2.04
VPS38Q05919 COX7YMR256C 183 nt2.29□□□□□ -2.04
VPS38Q05919 YPR039WYPR039W 336 nt2.29□□□□□ -2.04
VPS38Q05919 TOR1YJR066W 7413 nt2.29□□□□□ -2.04
VPS38Q05919 RRP6YOR001W 2202 nt2.29□□□□□ -2.04
VPS38Q05919 TIM9YEL020W-A 264 nt2.28□□□□□ -2.04
VPS38Q05919 NOP10YHR072W-A 177 nt2.28□□□□□ -2.04
VPS38Q05919 YLR101CYLR101C 396 nt2.28□□□□□ -2.04
VPS38Q05919 RRT1YBL048W 312 nt2.28□□□□□ -2.04
VPS38Q05919 ATP17YDR377W 306 nt2.27□□□□□ -2.05
VPS38Q05919 YER006C-AYER006C-A 318 nt2.27□□□□□ -2.05
VPS38Q05919 RPS24AYER074W 408 nt2.27□□□□□ -2.05
VPS38Q05919 SMD1YGR074W 441 nt2.27□□□□□ -2.05
VPS38Q05919 YLR154W-AYLR154W-A 186 nt2.27□□□□□ -2.05
VPS38Q05919 MF(ALPHA)1YPL187W 498 nt2.27□□□□□ -2.05
VPS38Q05919 TSC3YBR058C-A 243 nt2.27□□□□□ -2.05
VPS38Q05919 PRM3YPL192C 402 nt2.27□□□□□ -2.05
VPS38Q05919 MGM1YOR211C 2646 nt2.27□□□□□ -2.05
VPS38Q05919 VPS41YDR080W 2979 nt2.27□□□□□ -2.05
VPS38Q05919 NOP14YDL148C 2433 nt2.27□□□□□ -2.05
VPS38Q05919 BFA1YJR053W 1725 nt2.26□□□□□ -2.05
VPS38Q05919 YDL041WYDL041W 354 nt2.26□□□□□ -2.05
VPS38Q05919 YGR025WYGR025W 303 nt2.26□□□□□ -2.05
VPS38Q05919 MSL1YIR009W 336 nt2.26□□□□□ -2.05
VPS38Q05919 YKL165C-AYKL165C-A 234 nt2.26□□□□□ -2.05
VPS38Q05919 UTP30YKR060W 825 nt2.26□□□□□ -2.05
VPS38Q05919 YMR324CYMR324C 243 nt2.26□□□□□ -2.05
VPS38Q05919 snR13snR13 124 nt2.26□□□□□ -2.05
VPS38Q05919 BUB1YGR188C 3066 nt2.26□□□□□ -2.05
VPS38Q05919 SEC31YDL195W 3822 nt2.26□□□□□ -2.05
VPS38Q05919 NUP120YKL057C 3114 nt2.26□□□□□ -2.05
VPS38Q05919 IRC10YOL015W 1761 nt2.26□□□□□ -2.05
VPS38Q05919 YER068C-AYER068C-A 432 nt2.25□□□□□ -2.05
VPS38Q05919 VTI1YMR197C 654 nt2.25□□□□□ -2.05
VPS38Q05919 TOF1YNL273W 3717 nt2.25□□□□□ -2.05
VPS38Q05919 SWT1YOR166C 1377 nt2.24□□□□□ -2.05
VPS38Q05919 NUP170YBL079W 4509 nt2.24□□□□□ -2.05
VPS38Q05919 AFI1YOR129C 2682 nt2.24□□□□□ -2.05
VPS38Q05919 CDC50YCR094W 1176 nt2.24□□□□□ -2.05
VPS38Q05919 YHR180W-AYHR180W-A 183 nt2.24□□□□□ -2.05
VPS38Q05919 CMC2YBL059C-A 330 nt2.24□□□□□ -2.05
VPS38Q05919 RPL36BYPL249C-A 303 nt2.24□□□□□ -2.05
VPS38Q05919 KAP123YER110C 3342 nt2.24□□□□□ -2.05
VPS38Q05919 UBR1YGR184C 5853 nt2.24□□□□□ -2.05
VPS38Q05919 HUR1YGL168W 333 nt2.23□□□□□ -2.05
VPS38Q05919 SNC1YAL030W 354 nt2.23□□□□□ -2.05
VPS38Q05919 RPS17AYML024W 411 nt2.23□□□□□ -2.05
VPS38Q05919 TIF11YMR260C 462 nt2.23□□□□□ -2.05
VPS38Q05919 FYV12YOR183W 390 nt2.23□□□□□ -2.05
VPS38Q05919 RTC6YPL183W-A 282 nt2.23□□□□□ -2.05
VPS38Q05919 RSA1YPL193W 1146 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 171.8 ms