Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 RLM1YPL089C 2031 nt3.22□□□□□ -1.89 RIP-Chip
PUB1P32588 ERP6YGL002W 651 nt3.22□□□□□ -1.89 RIP-Chip
PUB1P32588 RPS7AYOR096W 573 nt3.22□□□□□ -1.89
PUB1P32588 YOR314W-AYOR314W-A 111 nt3.22□□□□□ -1.89
PUB1P32588 YPR014CYPR014C 330 nt3.22□□□□□ -1.89
PUB1P32588 ETP1YHL010C 1758 nt3.22□□□□□ -1.89
PUB1P32588 SLA1YBL007C 3735 nt3.22□□□□□ -1.89
PUB1P32588 SPB1YCL054W 2526 nt3.22□□□□□ -1.89
PUB1P32588 MUS81YDR386W 1899 nt3.22□□□□□ -1.89
PUB1P32588 XRS2YDR369C 2565 nt3.21□□□□□ -1.9
PUB1P32588 YDR003W-AYDR003W-A 123 nt3.21□□□□□ -1.9
PUB1P32588 IES6YEL044W 501 nt3.21□□□□□ -1.9
PUB1P32588 SBH1YER087C-B 249 nt3.21□□□□□ -1.9 RIP-Chip
PUB1P32588 YIL142C-AYIL142C-A 333 nt3.21□□□□□ -1.9
PUB1P32588 YML007C-AYML007C-A 111 nt3.21□□□□□ -1.9
PUB1P32588 MDN1YLR106C 14733 nt3.21□□□□□ -1.9
PUB1P32588 DIS3YOL021C 3006 nt3.21□□□□□ -1.9
PUB1P32588 RAD54YGL163C 2697 nt3.2□□□□□ -1.9
PUB1P32588 GYL1YMR192W 2163 nt3.2□□□□□ -1.9
PUB1P32588 AIM11YER093C-A 414 nt3.2□□□□□ -1.9 RIP-Chip
PUB1P32588 TMA19YKL056C 504 nt3.2□□□□□ -1.9 RIP-Chip
PUB1P32588 YLR255CYLR255C 354 nt3.2□□□□□ -1.9
PUB1P32588 DOA4YDR069C 2781 nt3.2□□□□□ -1.9
PUB1P32588 YLR352WYLR352W 2424 nt3.2□□□□□ -1.9
PUB1P32588 ATG26YLR189C 3597 nt3.2□□□□□ -1.9
PUB1P32588 ECM5YMR176W 4236 nt3.19□□□□□ -1.9
PUB1P32588 YOL057WYOL057W 2136 nt3.19□□□□□ -1.9
PUB1P32588 BRO1YPL084W 2535 nt3.19□□□□□ -1.9 RIP-Chip
PUB1P32588 YDR286CYDR286C 345 nt3.19□□□□□ -1.9
PUB1P32588 QCR7YDR529C 384 nt3.19□□□□□ -1.9 RIP-Chip
PUB1P32588 SPT4YGR063C 309 nt3.19□□□□□ -1.9 RIP-Chip
PUB1P32588 POG1YIL122W 1056 nt3.19□□□□□ -1.9
PUB1P32588 SMC3YJL074C 3693 nt3.19□□□□□ -1.9
PUB1P32588 NUP85YJR042W 2235 nt3.19□□□□□ -1.9
PUB1P32588 GCD6YDR211W 2139 nt3.19□□□□□ -1.9
PUB1P32588 FAP7YDL166C 594 nt3.18□□□□□ -1.9
PUB1P32588 USE1YGL098W 738 nt3.18□□□□□ -1.9
PUB1P32588 YMR324CYMR324C 243 nt3.18□□□□□ -1.9
PUB1P32588 YNL067W-BYNL067W-B 141 nt3.18□□□□□ -1.9
PUB1P32588 GIS2YNL255C 462 nt3.18□□□□□ -1.9
PUB1P32588 YGR027W-BYGR027W-B 5268 nt3.17□□□□□ -1.9
PUB1P32588 YLR227W-BYLR227W-B 5268 nt3.17□□□□□ -1.9
PUB1P32588 YPR158C-DYPR158C-D 5268 nt3.17□□□□□ -1.9
PUB1P32588 SEG1YMR086W 2883 nt3.17□□□□□ -1.9
PUB1P32588 snR61snR61 90 nt3.17□□□□□ -1.9
PUB1P32588 SMT3YDR510W 306 nt3.17□□□□□ -1.9
PUB1P32588 COX19YLL018C-A 297 nt3.17□□□□□ -1.9 RIP-Chip
PUB1P32588 TRX1YLR043C 312 nt3.17□□□□□ -1.9 RIP-Chip
PUB1P32588 SOD1YJR104C 465 nt3.16□□□□□ -1.9
PUB1P32588 MCD4YKL165C 2760 nt3.16□□□□□ -1.9 RIP-Chip
PUB1P32588 HSC82YMR186W 2118 nt3.16□□□□□ -1.9
PUB1P32588 LEU3YLR451W 2661 nt3.16□□□□□ -1.9
PUB1P32588 NMA111YNL123W 2994 nt3.15□□□□□ -1.9
PUB1P32588 TFC8YPL007C 1767 nt3.15□□□□□ -1.9
PUB1P32588 NSP1YJL041W 2472 nt3.15□□□□□ -1.9
PUB1P32588 SNU114YKL173W 3027 nt3.15□□□□□ -1.9 RIP-Chip
PUB1P32588 PIG1YLR273C 1947 nt3.15□□□□□ -1.9
PUB1P32588 KHA1YJL094C 2622 nt3.15□□□□□ -1.9
PUB1P32588 SKT5YBL061C 2091 nt3.15□□□□□ -1.9
PUB1P32588 SWI1YPL016W 3945 nt3.15□□□□□ -1.91 RIP-Chip
PUB1P32588 KRE5YOR336W 4098 nt3.15□□□□□ -1.91
PUB1P32588 YHR071C-AYHR071C-A 321 nt3.15□□□□□ -1.91
PUB1P32588 RPL33BYOR234C 324 nt3.15□□□□□ -1.91
PUB1P32588 SPT21YMR179W 2277 nt3.15□□□□□ -1.91
PUB1P32588 PEX1YKL197C 3132 nt3.15□□□□□ -1.91
PUB1P32588 BRP1YGL007W 378 nt3.14□□□□□ -1.91
PUB1P32588 LSO2YGR169C-A 279 nt3.14□□□□□ -1.91
PUB1P32588 YHL006W-AYHL006W-A 354 nt3.14□□□□□ -1.91
PUB1P32588 YJL022WYJL022W 309 nt3.14□□□□□ -1.91
PUB1P32588 RPL6AYML073C 531 nt3.14□□□□□ -1.91 RIP-Chip
PUB1P32588 FPR1YNL135C 345 nt3.14□□□□□ -1.91 RIP-Chip
PUB1P32588 YKL050CYKL050C 2769 nt3.14□□□□□ -1.91
PUB1P32588 YDR089WYDR089W 2610 nt3.13□□□□□ -1.91 RIP-Chip
PUB1P32588 PKH1YDR490C 2301 nt3.13□□□□□ -1.91
PUB1P32588 SSQ1YLR369W 1974 nt3.13□□□□□ -1.91
PUB1P32588 GPI13YLL031C 3054 nt3.13□□□□□ -1.91 RIP-Chip
PUB1P32588 AUS1YOR011W 4185 nt3.13□□□□□ -1.91 RIP-Chip
PUB1P32588 YGL069CYGL069C 465 nt3.13□□□□□ -1.91
PUB1P32588 XRN1YGL173C 4587 nt3.12□□□□□ -1.91
PUB1P32588 RPL20BYOR312C 519 nt3.12□□□□□ -1.91 RIP-Chip
PUB1P32588 YOR345CYOR345C 351 nt3.12□□□□□ -1.91
PUB1P32588 ACM1YPL267W 630 nt3.12□□□□□ -1.91
PUB1P32588 ARO1YDR127W 4767 nt3.12□□□□□ -1.91
PUB1P32588 NOP53YPL146C 1368 nt3.12□□□□□ -1.91
PUB1P32588 YDR464C-AYDR464C-A 189 nt3.11□□□□□ -1.91
PUB1P32588 YER053C-AYER053C-A 114 nt3.11□□□□□ -1.91
PUB1P32588 YFL065CYFL065C 309 nt3.11□□□□□ -1.91
PUB1P32588 ECM12YHR021W-A 456 nt3.11□□□□□ -1.91
PUB1P32588 YBR099CYBR099C 384 nt3.11□□□□□ -1.91
PUB1P32588 YDL176WYDL176W 2127 nt3.11□□□□□ -1.91
PUB1P32588 TMN3YER113C 2121 nt3.11□□□□□ -1.91 RIP-Chip
PUB1P32588 CPA2YJR109C 3357 nt3.11□□□□□ -1.91
PUB1P32588 URB2YJR041C 3525 nt3.1□□□□□ -1.91
PUB1P32588 BAS1YKR099W 2436 nt3.1□□□□□ -1.91
PUB1P32588 YDR341CYDR341C 1824 nt3.1□□□□□ -1.91
PUB1P32588 RRP5YMR229C 5190 nt3.1□□□□□ -1.91
PUB1P32588 YGL063C-AYGL063C-A 150 nt3.1□□□□□ -1.91
PUB1P32588 NPR1YNL183C 2373 nt3.1□□□□□ -1.91
PUB1P32588 YEL025CYEL025C 3567 nt3.1□□□□□ -1.91
PUB1P32588 BMS1YPL217C 3552 nt3.1□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 53 ms