Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL356652.1-201ENST00000615962 565 ntBASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 LINC01568-207ENST00000641790 1380 ntBASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 AC080038.3-201ENST00000623346 1952 ntBASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 AC073195.1-201ENST00000607241 877 ntBASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 REXO1L10P-201ENST00000615707 1290 ntBASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 AL121829.2-201ENST00000620908 328 ntBASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
TRIM43Q96BQ3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 AC073508.3-201ENST00000619697 1419 ntBASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 TERF1P1-201ENST00000311003 1181 ntBASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 MIR1238-201ENST00000408483 83 ntBASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 NUDT16P1-203ENST00000513809 620 ntBASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM43Q96BQ3 CYP2D8P-201ENST00000433633 1490 ntBASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 UNC93B2-201ENST00000285383 730 ntBASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 NTF6B-201ENST00000591913 560 ntBASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 NBPF21P-201ENST00000425093 1451 ntBASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM43Q96BQ3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 FAM99A-202ENST00000538190 1989 ntBASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM43Q96BQ3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM43Q96BQ3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM43Q96BQ3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM43Q96BQ3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.33■■□□□ 1.16
TRIM43Q96BQ3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 AC104076.2-201ENST00000448912 469 ntBASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms