Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 YDL185C-AYDL185C-A 228 nt3.65□□□□□ -1.83
MSH6Q03834 YDR524C-AYDR524C-A 120 nt3.65□□□□□ -1.83
MSH6Q03834 YFL065CYFL065C 309 nt3.65□□□□□ -1.83
MSH6Q03834 COX23YHR116W 456 nt3.65□□□□□ -1.83
MSH6Q03834 YPL182CYPL182C 384 nt3.65□□□□□ -1.83
MSH6Q03834 YAK1YJL141C 2424 nt3.65□□□□□ -1.83
MSH6Q03834 NPR2YEL062W 1848 nt3.65□□□□□ -1.83
MSH6Q03834 YDR034C-DYDR034C-D 5313 nt3.64□□□□□ -1.83
MSH6Q03834 TAF1YGR274C 3201 nt3.64□□□□□ -1.83
MSH6Q03834 SCW11YGL028C 1629 nt3.64□□□□□ -1.83
MSH6Q03834 HTL1YCR020W-B 237 nt3.64□□□□□ -1.83
MSH6Q03834 YDR048CYDR048C 315 nt3.64□□□□□ -1.83
MSH6Q03834 LSM1YJL124C 519 nt3.64□□□□□ -1.83
MSH6Q03834 YJL135WYJL135W 318 nt3.64□□□□□ -1.83
MSH6Q03834 LCL2YLR104W 396 nt3.64□□□□□ -1.83
MSH6Q03834 YLR342W-AYLR342W-A 174 nt3.64□□□□□ -1.83
MSH6Q03834 NSP1YJL041W 2472 nt3.64□□□□□ -1.83
MSH6Q03834 MSH2YOL090W 2895 nt3.64□□□□□ -1.83
MSH6Q03834 RAD2YGR258C 3096 nt3.63□□□□□ -1.83
MSH6Q03834 snR79snR79 84 nt3.63□□□□□ -1.83
MSH6Q03834 REG1YDR028C 3045 nt3.62□□□□□ -1.83
MSH6Q03834 BMS1YPL217C 3552 nt3.62□□□□□ -1.83
MSH6Q03834 APC11YDL008W 498 nt3.62□□□□□ -1.83
MSH6Q03834 RPS17BYDR447C 411 nt3.62□□□□□ -1.83
MSH6Q03834 YER088C-AYER088C-A 324 nt3.62□□□□□ -1.83
MSH6Q03834 YJL020W-AYJL020W-A 258 nt3.62□□□□□ -1.83
MSH6Q03834 HTB2YBL002W 396 nt3.62□□□□□ -1.83
MSH6Q03834 RPS18BYML026C 441 nt3.62□□□□□ -1.83
MSH6Q03834 YMR194C-AYMR194C-A 225 nt3.62□□□□□ -1.83
MSH6Q03834 TIM12YBR091C 330 nt3.62□□□□□ -1.83
MSH6Q03834 AIM9YER080W 1884 nt3.62□□□□□ -1.83
MSH6Q03834 DBP6YNR038W 1890 nt3.61□□□□□ -1.83
MSH6Q03834 SHH3YMR118C 591 nt3.61□□□□□ -1.83
MSH6Q03834 MF(ALPHA)1YPL187W 498 nt3.61□□□□□ -1.83
MSH6Q03834 FLO5YHR211W 3228 nt3.61□□□□□ -1.83
MSH6Q03834 PRP39YML046W 1890 nt3.6□□□□□ -1.83
MSH6Q03834 BRO1YPL084W 2535 nt3.6□□□□□ -1.83
MSH6Q03834 YBR064WYBR064W 429 nt3.6□□□□□ -1.83
MSH6Q03834 YPR146CYPR146C 330 nt3.6□□□□□ -1.83
MSH6Q03834 YJL181WYJL181W 1836 nt3.6□□□□□ -1.83
MSH6Q03834 BNA4YBL098W 1383 nt3.6□□□□□ -1.83
MSH6Q03834 RAD61YDR014W 1944 nt3.6□□□□□ -1.83
MSH6Q03834 RAD4YER162C 2265 nt3.59□□□□□ -1.83
MSH6Q03834 COG3YER157W 2406 nt3.59□□□□□ -1.83
MSH6Q03834 RCY1YJL204C 2523 nt3.59□□□□□ -1.83
MSH6Q03834 RPL40AYIL148W 387 nt3.59□□□□□ -1.83
MSH6Q03834 CCW14YLR390W-A 717 nt3.59□□□□□ -1.83
MSH6Q03834 YOR302WYOR302W 78 nt3.59□□□□□ -1.83
MSH6Q03834 FAP7YDL166C 594 nt3.58□□□□□ -1.84
MSH6Q03834 YER039C-AYER039C-A 219 nt3.58□□□□□ -1.84
MSH6Q03834 YOR008C-AYOR008C-A 225 nt3.58□□□□□ -1.84
MSH6Q03834 CDC24YAL041W 2565 nt3.57□□□□□ -1.84
MSH6Q03834 CHS3YBR023C 3498 nt3.57□□□□□ -1.84
MSH6Q03834 MTC3YGL226W 372 nt3.57□□□□□ -1.84
MSH6Q03834 YGR164WYGR164W 336 nt3.57□□□□□ -1.84
MSH6Q03834 PHO81YGR233C 3537 nt3.57□□□□□ -1.84
MSH6Q03834 RPS28BYLR264W 204 nt3.57□□□□□ -1.84
MSH6Q03834 GIS4YML006C 2325 nt3.57□□□□□ -1.84
MSH6Q03834 MYO5YMR109W 3660 nt3.57□□□□□ -1.84
MSH6Q03834 LRG1YDL240W 3054 nt3.56□□□□□ -1.84
MSH6Q03834 MVP1YMR004W 1536 nt3.56□□□□□ -1.84
MSH6Q03834 YIL032CYIL032C 357 nt3.56□□□□□ -1.84
MSH6Q03834 YIL102CYIL102C 306 nt3.56□□□□□ -1.84
MSH6Q03834 AYR1YIL124W 894 nt3.56□□□□□ -1.84
MSH6Q03834 RPL32YBL092W 393 nt3.56□□□□□ -1.84
MSH6Q03834 GYP7YDL234C 2241 nt3.56□□□□□ -1.84
MSH6Q03834 SKT5YBL061C 2091 nt3.56□□□□□ -1.84
MSH6Q03834 SHQ1YIL104C 1524 nt3.55□□□□□ -1.84
MSH6Q03834 EXO84YBR102C 2262 nt3.55□□□□□ -1.84
MSH6Q03834 SMC3YJL074C 3693 nt3.55□□□□□ -1.84
MSH6Q03834 AUS1YOR011W 4185 nt3.55□□□□□ -1.84
MSH6Q03834 SIZ1YDR409W 2715 nt3.55□□□□□ -1.84
MSH6Q03834 TIM13YGR181W 318 nt3.55□□□□□ -1.84
MSH6Q03834 RPL36BYPL249C-A 303 nt3.55□□□□□ -1.84
MSH6Q03834 VPS64YDR200C 1815 nt3.55□□□□□ -1.84
MSH6Q03834 YMR230W-AYMR230W-A 189 nt3.54□□□□□ -1.84
MSH6Q03834 TRM7YBR061C 933 nt3.54□□□□□ -1.84
MSH6Q03834 YDR210W-BYDR210W-B 5313 nt3.54□□□□□ -1.84
MSH6Q03834 YDR261W-BYDR261W-B 5313 nt3.54□□□□□ -1.84
MSH6Q03834 YFL002W-AYFL002W-A 5313 nt3.54□□□□□ -1.84
MSH6Q03834 YGR161W-BYGR161W-B 5313 nt3.54□□□□□ -1.84
MSH6Q03834 YLR410W-BYLR410W-B 5313 nt3.54□□□□□ -1.84
MSH6Q03834 YCL019WYCL019W 5313 nt3.54□□□□□ -1.84
MSH6Q03834 SSE1YPL106C 2082 nt3.53□□□□□ -1.84
MSH6Q03834 VPS3YDR495C 3036 nt3.53□□□□□ -1.84
MSH6Q03834 TCP1YDR212W 1680 nt3.53□□□□□ -1.84
MSH6Q03834 FMP32YFL046W 624 nt3.53□□□□□ -1.84
MSH6Q03834 YBL083CYBL083C 426 nt3.53□□□□□ -1.84
MSH6Q03834 YBR197CYBR197C 654 nt3.53□□□□□ -1.84
MSH6Q03834 RSF2YJR127C 4143 nt3.52□□□□□ -1.85
MSH6Q03834 RRP5YMR229C 5190 nt3.52□□□□□ -1.85
MSH6Q03834 YBL109WYBL109W 336 nt3.52□□□□□ -1.85
MSH6Q03834 RIM20YOR275C 1986 nt3.51□□□□□ -1.85
MSH6Q03834 SNT1YCR033W 3681 nt3.51□□□□□ -1.85
MSH6Q03834 DOA4YDR069C 2781 nt3.51□□□□□ -1.85
MSH6Q03834 snR55snR55 98 nt3.51□□□□□ -1.85
MSH6Q03834 YMR31YFR049W 372 nt3.51□□□□□ -1.85
MSH6Q03834 YGL239CYGL239C 315 nt3.51□□□□□ -1.85
MSH6Q03834 RPS23AYGR118W 438 nt3.51□□□□□ -1.85
MSH6Q03834 YHL042WYHL042W 453 nt3.51□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 65.4 ms