Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 FMP16YDR070C 282 nt1.86□□□□□ -2.11
YNL040WP53960 TSA2YDR453C 591 nt1.86□□□□□ -2.11
YNL040WP53960 HRI1YLR301W 735 nt1.86□□□□□ -2.11
YNL040WP53960 FAB1YFR019W 6837 nt1.86□□□□□ -2.11
YNL040WP53960 AFR1YDR085C 1863 nt1.86□□□□□ -2.11
YNL040WP53960 VPH1YOR270C 2523 nt1.85□□□□□ -2.11
YNL040WP53960 UBP11YKR098C 2154 nt1.85□□□□□ -2.11
YNL040WP53960 UTP21YLR409C 2820 nt1.85□□□□□ -2.11
YNL040WP53960 YDR029WYDR029W 315 nt1.85□□□□□ -2.11
YNL040WP53960 YER068C-AYER068C-A 432 nt1.85□□□□□ -2.11
YNL040WP53960 RAD6YGL058W 519 nt1.85□□□□□ -2.11
YNL040WP53960 YKL023C-AYKL023C-A 228 nt1.85□□□□□ -2.11
YNL040WP53960 PTC5YOR090C 1719 nt1.85□□□□□ -2.11
YNL040WP53960 PEP1YBL017C 4740 nt1.84□□□□□ -2.11
YNL040WP53960 YGL165CYGL165C 579 nt1.84□□□□□ -2.11
YNL040WP53960 LRP1YHR081W 555 nt1.84□□□□□ -2.11
YNL040WP53960 YLR379WYLR379W 375 nt1.84□□□□□ -2.11
YNL040WP53960 YPR153WYPR153W 423 nt1.84□□□□□ -2.11
YNL040WP53960 LRE1YCL051W 1752 nt1.84□□□□□ -2.12
YNL040WP53960 PRK1YIL095W 2433 nt1.83□□□□□ -2.12
YNL040WP53960 RTT101YJL047C 2529 nt1.83□□□□□ -2.12
YNL040WP53960 ANS1YHR126C 480 nt1.83□□□□□ -2.12
YNL040WP53960 YMR013C-AYMR013C-A 150 nt1.83□□□□□ -2.12
YNL040WP53960 SWS2YNL081C 432 nt1.83□□□□□ -2.12
YNL040WP53960 YOR364WYOR364W 369 nt1.83□□□□□ -2.12
YNL040WP53960 NIC96YFR002W 2520 nt1.83□□□□□ -2.12
YNL040WP53960 YHR214C-BYHR214C-B 5382 nt1.83□□□□□ -2.12
YNL040WP53960 UBR2YLR024C 5619 nt1.82□□□□□ -2.12
YNL040WP53960 YHR210CYHR210C 1026 nt1.82□□□□□ -2.12
YNL040WP53960 IST3YIR005W 447 nt1.82□□□□□ -2.12
YNL040WP53960 BET4YJL031C 984 nt1.82□□□□□ -2.12
YNL040WP53960 BUD19YJL188C 309 nt1.82□□□□□ -2.12
YNL040WP53960 RAM2YKL019W 951 nt1.82□□□□□ -2.12
YNL040WP53960 SHE2YKL130C 741 nt1.82□□□□□ -2.12
YNL040WP53960 YPR096CYPR096C 303 nt1.82□□□□□ -2.12
YNL040WP53960 IST2YBR086C 2841 nt1.82□□□□□ -2.12
YNL040WP53960 ASG1YIL130W 2895 nt1.82□□□□□ -2.12
YNL040WP53960 KIP1YBL063W 3336 nt1.82□□□□□ -2.12
YNL040WP53960 REV3YPL167C 4515 nt1.82□□□□□ -2.12
YNL040WP53960 IRC10YOL015W 1761 nt1.82□□□□□ -2.12
YNL040WP53960 AHC2YCR082W 387 nt1.81□□□□□ -2.12
YNL040WP53960 CDC50YCR094W 1176 nt1.81□□□□□ -2.12
YNL040WP53960 YER038W-AYER038W-A 381 nt1.81□□□□□ -2.12
YNL040WP53960 YIR020CYIR020C 303 nt1.81□□□□□ -2.12
YNL040WP53960 FYV12YOR183W 390 nt1.81□□□□□ -2.12
YNL040WP53960 REV1YOR346W 2958 nt1.8□□□□□ -2.12
YNL040WP53960 NDD1YOR372C 1665 nt1.8□□□□□ -2.12
YNL040WP53960 TRL1YJL087C 2484 nt1.8□□□□□ -2.12
YNL040WP53960 RPL29YFR032C-A 180 nt1.8□□□□□ -2.12
YNL040WP53960 YGL014C-AYGL014C-A 162 nt1.8□□□□□ -2.12
YNL040WP53960 EMC4YGL231C 573 nt1.8□□□□□ -2.12
YNL040WP53960 YIL029CYIL029C 429 nt1.8□□□□□ -2.12
YNL040WP53960 YJR023CYJR023C 402 nt1.8□□□□□ -2.12
YNL040WP53960 ARV1YLR242C 966 nt1.8□□□□□ -2.12
YNL040WP53960 YLR271WYLR271W 825 nt1.8□□□□□ -2.12
YNL040WP53960 YPR172WYPR172W 603 nt1.8□□□□□ -2.12
YNL040WP53960 NCL1YBL024W 2055 nt1.79□□□□□ -2.12
YNL040WP53960 YCR081C-AYCR081C-A 237 nt1.79□□□□□ -2.12
YNL040WP53960 YDL016CYDL016C 303 nt1.79□□□□□ -2.12
YNL040WP53960 CHZ1YER030W 462 nt1.79□□□□□ -2.12
YNL040WP53960 YIL058WYIL058W 285 nt1.79□□□□□ -2.12
YNL040WP53960 HYR1YIR037W 492 nt1.79□□□□□ -2.12
YNL040WP53960 MGR1YCL044C 1254 nt1.79□□□□□ -2.12
YNL040WP53960 YDR210W-AYDR210W-A 1317 nt1.79□□□□□ -2.12
YNL040WP53960 YGL015CYGL015C 393 nt1.78□□□□□ -2.12
YNL040WP53960 UBX4YMR067C 1251 nt1.78□□□□□ -2.12
YNL040WP53960 IRC20YLR247C 4671 nt1.78□□□□□ -2.13
YNL040WP53960 BI4Q0120 1917 nt1.78□□□□□ -2.13
YNL040WP53960 VPS8YAL002W 3825 nt1.77□□□□□ -2.13
YNL040WP53960 HER1YOR227W 3741 nt1.77□□□□□ -2.13
YNL040WP53960 MYO2YOR326W 4725 nt1.77□□□□□ -2.13
YNL040WP53960 RUD3YOR216C 1455 nt1.77□□□□□ -2.13
YNL040WP53960 ARP7YPR034W 1434 nt1.77□□□□□ -2.13
YNL040WP53960 YOR343W-AYOR343W-A 1317 nt1.77□□□□□ -2.13
YNL040WP53960 snR84snR84 550 nt1.77□□□□□ -2.13
YNL040WP53960 YER175W-AYER175W-A 165 nt1.77□□□□□ -2.13
YNL040WP53960 YGL024WYGL024W 336 nt1.77□□□□□ -2.13
YNL040WP53960 PRM8YGL053W 714 nt1.77□□□□□ -2.13
YNL040WP53960 PEP8YJL053W 1140 nt1.77□□□□□ -2.13
YNL040WP53960 YLR252WYLR252W 306 nt1.77□□□□□ -2.13
YNL040WP53960 RCN2YOR220W 798 nt1.77□□□□□ -2.13
YNL040WP53960 YPL080CYPL080C 327 nt1.77□□□□□ -2.13
YNL040WP53960 MEI5YPL121C 669 nt1.77□□□□□ -2.13
YNL040WP53960 DFG16YOR030W 1860 nt1.77□□□□□ -2.13
YNL040WP53960 TUS1YLR425W 3924 nt1.77□□□□□ -2.13
YNL040WP53960 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
YNL040WP53960 IRC4YDR540C 540 nt1.76□□□□□ -2.13
YNL040WP53960 SNC1YAL030W 354 nt1.76□□□□□ -2.13
YNL040WP53960 YKR051WYKR051W 1257 nt1.76□□□□□ -2.13
YNL040WP53960 RLP24YLR009W 600 nt1.76□□□□□ -2.13
YNL040WP53960 YHC1YLR298C 696 nt1.76□□□□□ -2.13
YNL040WP53960 YNL146C-AYNL146C-A 195 nt1.76□□□□□ -2.13
YNL040WP53960 YPL039WYPL039W 951 nt1.76□□□□□ -2.13
YNL040WP53960 PET309YLR067C 2898 nt1.76□□□□□ -2.13
YNL040WP53960 SOK2YMR016C 2358 nt1.75□□□□□ -2.13
YNL040WP53960 YDL025W-AYDL025W-A 105 nt1.75□□□□□ -2.13
YNL040WP53960 CRD1YDL142C 852 nt1.75□□□□□ -2.13
YNL040WP53960 SPO13YHR014W 876 nt1.75□□□□□ -2.13
YNL040WP53960 YIL030W-AYIL030W-A 339 nt1.75□□□□□ -2.13
YNL040WP53960 MSL1YIR009W 336 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 88.9 ms