Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 ATP15YPL271W 189 nt1.78□□□□□ -2.12
CDC40P40968 ATG9YDL149W 2994 nt1.78□□□□□ -2.12
CDC40P40968 DNA2YHR164C 4569 nt1.78□□□□□ -2.12
CDC40P40968 DPB11YJL090C 2295 nt1.78□□□□□ -2.13
CDC40P40968 VPS15YBR097W 4365 nt1.77□□□□□ -2.13
CDC40P40968 YFR016CYFR016C 3702 nt1.77□□□□□ -2.13
CDC40P40968 YDR018CYDR018C 1191 nt1.77□□□□□ -2.13
CDC40P40968 CAJ1YER048C 1176 nt1.77□□□□□ -2.13
CDC40P40968 SNO3YFL060C 669 nt1.77□□□□□ -2.13
CDC40P40968 SMD1YGR074W 441 nt1.77□□□□□ -2.13
CDC40P40968 TPM2YIL138C 486 nt1.77□□□□□ -2.13
CDC40P40968 SNO2YNL334C 669 nt1.77□□□□□ -2.13
CDC40P40968 PDR3YBL005W 2931 nt1.77□□□□□ -2.13
CDC40P40968 UFD4YKL010C 4452 nt1.76□□□□□ -2.13
CDC40P40968 YCR087C-AYCR087C-A 462 nt1.76□□□□□ -2.13
CDC40P40968 BNA7YDR428C 786 nt1.76□□□□□ -2.13
CDC40P40968 GRX8YLR364W 330 nt1.76□□□□□ -2.13
CDC40P40968 MUD1YBR119W 897 nt1.76□□□□□ -2.13
CDC40P40968 PUT3YKL015W 2940 nt1.75□□□□□ -2.13
CDC40P40968 YPP1YGR198W 2454 nt1.75□□□□□ -2.13
CDC40P40968 PAU3YCR104W 375 nt1.75□□□□□ -2.13
CDC40P40968 YDR286CYDR286C 345 nt1.75□□□□□ -2.13
CDC40P40968 PEA2YER149C 1263 nt1.75□□□□□ -2.13
CDC40P40968 YFR009W-AYFR009W-A 258 nt1.75□□□□□ -2.13
CDC40P40968 GET1YGL020C 708 nt1.75□□□□□ -2.13
CDC40P40968 YHR071C-AYHR071C-A 321 nt1.75□□□□□ -2.13
CDC40P40968 RPL37AYLR185W 267 nt1.75□□□□□ -2.13
CDC40P40968 PHO80YOL001W 882 nt1.75□□□□□ -2.13
CDC40P40968 YOR394C-AYOR394C-A 168 nt1.75□□□□□ -2.13
CDC40P40968 APM3YBR288C 1452 nt1.75□□□□□ -2.13
CDC40P40968 YDR461C-AYDR461C-A 243 nt1.74□□□□□ -2.13
CDC40P40968 COX13YGL191W 390 nt1.74□□□□□ -2.13
CDC40P40968 YJL052C-AYJL052C-A 120 nt1.74□□□□□ -2.13
CDC40P40968 NBP1YLR457C 960 nt1.74□□□□□ -2.13
CDC40P40968 YMR013C-AYMR013C-A 150 nt1.74□□□□□ -2.13
CDC40P40968 URA10YMR271C 684 nt1.74□□□□□ -2.13
CDC40P40968 RPS7BYNL096C 573 nt1.74□□□□□ -2.13
CDC40P40968 CFT2YLR115W 2580 nt1.74□□□□□ -2.13
CDC40P40968 BI4Q0120 1917 nt1.74□□□□□ -2.13
CDC40P40968 RPH1YER169W 2391 nt1.73□□□□□ -2.13
CDC40P40968 YDL118WYDL118W 381 nt1.73□□□□□ -2.13
CDC40P40968 RPI1YIL119C 1224 nt1.73□□□□□ -2.13
CDC40P40968 YMR052C-AYMR052C-A 366 nt1.73□□□□□ -2.13
CDC40P40968 SPO22YIL073C 2928 nt1.73□□□□□ -2.13
CDC40P40968 RIC1YLR039C 3171 nt1.72□□□□□ -2.13
CDC40P40968 BUD2YKL092C 3315 nt1.72□□□□□ -2.13
CDC40P40968 TIM8YJR135W-A 264 nt1.72□□□□□ -2.13
CDC40P40968 RCN1YKL159C 636 nt1.72□□□□□ -2.13
CDC40P40968 LCL2YLR104W 396 nt1.72□□□□□ -2.13
CDC40P40968 YBL029C-AYBL029C-A 285 nt1.72□□□□□ -2.13
CDC40P40968 CSI1YMR025W 888 nt1.72□□□□□ -2.13
CDC40P40968 ICY1YMR195W 384 nt1.72□□□□□ -2.13
CDC40P40968 YNL146C-AYNL146C-A 195 nt1.72□□□□□ -2.13
CDC40P40968 YOL029CYOL029C 606 nt1.72□□□□□ -2.13
CDC40P40968 RPL36BYPL249C-A 303 nt1.72□□□□□ -2.13
CDC40P40968 YPR096CYPR096C 303 nt1.72□□□□□ -2.13
CDC40P40968 SPE1YKL184W 1401 nt1.72□□□□□ -2.13
CDC40P40968 REF2YDR195W 1602 nt1.71□□□□□ -2.14
CDC40P40968 GPM2YDL021W 936 nt1.71□□□□□ -2.14
CDC40P40968 BTT1YDR252W 450 nt1.71□□□□□ -2.14
CDC40P40968 TMN3YER113C 2121 nt1.71□□□□□ -2.14
CDC40P40968 YGL015CYGL015C 393 nt1.71□□□□□ -2.14
CDC40P40968 YHR073W-AYHR073W-A 177 nt1.71□□□□□ -2.14
CDC40P40968 YJR087WYJR087W 351 nt1.71□□□□□ -2.14
CDC40P40968 SNC2YOR327C 348 nt1.71□□□□□ -2.14
CDC40P40968 snR43snR43 209 nt1.71□□□□□ -2.14
CDC40P40968 DNF3YMR162C 4971 nt1.71□□□□□ -2.14
CDC40P40968 MUD2YKL074C 1584 nt1.71□□□□□ -2.14
CDC40P40968 YNL144CYNL144C 2223 nt1.71□□□□□ -2.14
CDC40P40968 LHS1YKL073W 2646 nt1.7□□□□□ -2.14
CDC40P40968 TFC8YPL007C 1767 nt1.7□□□□□ -2.14
CDC40P40968 TMA20YER007C-A 546 nt1.7□□□□□ -2.14
CDC40P40968 BRP1YGL007W 378 nt1.7□□□□□ -2.14
CDC40P40968 SLX9YGR081C 633 nt1.7□□□□□ -2.14
CDC40P40968 VOA1YGR106C 798 nt1.7□□□□□ -2.14
CDC40P40968 RNR4YGR180C 1038 nt1.7□□□□□ -2.14
CDC40P40968 RPA34YJL148W 702 nt1.7□□□□□ -2.14
CDC40P40968 PRP21YJL203W 843 nt1.7□□□□□ -2.14
CDC40P40968 HSK3YKL138C-A 210 nt1.7□□□□□ -2.14
CDC40P40968 RTC6YPL183W-A 282 nt1.7□□□□□ -2.14
CDC40P40968 YPL238CYPL238C 390 nt1.7□□□□□ -2.14
CDC40P40968 YPR172WYPR172W 603 nt1.7□□□□□ -2.14
CDC40P40968 GRR1YJR090C 3456 nt1.7□□□□□ -2.14
CDC40P40968 AFR1YDR085C 1863 nt1.69□□□□□ -2.14
CDC40P40968 DIS3YOL021C 3006 nt1.69□□□□□ -2.14
CDC40P40968 YHC1YLR298C 696 nt1.69□□□□□ -2.14
CDC40P40968 YCL007CYCL007C 393 nt1.69□□□□□ -2.14
CDC40P40968 FKS1YLR342W 5631 nt1.69□□□□□ -2.14
CDC40P40968 CDC27YBL084C 2277 nt1.69□□□□□ -2.14
CDC40P40968 BRE1YDL074C 2103 nt1.69□□□□□ -2.14
CDC40P40968 MYO2YOR326W 4725 nt1.68□□□□□ -2.14
CDC40P40968 RNH70YGR276C 1662 nt1.68□□□□□ -2.14
CDC40P40968 VTC3YPL019C 2508 nt1.68□□□□□ -2.14
CDC40P40968 YDL068WYDL068W 330 nt1.68□□□□□ -2.14
CDC40P40968 SEC31YDL195W 3822 nt1.68□□□□□ -2.14
CDC40P40968 RPS24AYER074W 408 nt1.68□□□□□ -2.14
CDC40P40968 YFL012WYFL012W 447 nt1.68□□□□□ -2.14
CDC40P40968 SCEIQ0160 708 nt1.68□□□□□ -2.14
CDC40P40968 GIC1YHR061C 945 nt1.68□□□□□ -2.14
CDC40P40968 NUP82YJL061W 2142 nt1.68□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms