Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 MGR1YCL044C 1254 nt1.8□□□□□ -2.12
TDA11P38854 NIC96YFR002W 2520 nt1.8□□□□□ -2.12
TDA11P38854 RTT101YJL047C 2529 nt1.8□□□□□ -2.12
TDA11P38854 BFA1YJR053W 1725 nt1.8□□□□□ -2.12
TDA11P38854 PEX8YGR077C 1770 nt1.8□□□□□ -2.12
TDA11P38854 ATG11YPR049C 3537 nt1.79□□□□□ -2.12
TDA11P38854 YDR018CYDR018C 1191 nt1.79□□□□□ -2.12
TDA11P38854 IRC4YDR540C 540 nt1.79□□□□□ -2.12
TDA11P38854 YER172C-AYER172C-A 381 nt1.79□□□□□ -2.12
TDA11P38854 SPO11YHL022C 1197 nt1.79□□□□□ -2.12
TDA11P38854 tT(UGU)HtT(UGU)H 72 nt1.79□□□□□ -2.12
TDA11P38854 NCL1YBL024W 2055 nt1.78□□□□□ -2.12
TDA11P38854 RAD6YGL058W 519 nt1.78□□□□□ -2.12
TDA11P38854 RPI1YIL119C 1224 nt1.78□□□□□ -2.12
TDA11P38854 TPM2YIL138C 486 nt1.78□□□□□ -2.12
TDA11P38854 IST3YIR005W 447 nt1.78□□□□□ -2.12
TDA11P38854 YJL127C-BYJL127C-B 159 nt1.78□□□□□ -2.12
TDA11P38854 YKR075W-AYKR075W-A 270 nt1.78□□□□□ -2.12
TDA11P38854 YMR247W-AYMR247W-A 144 nt1.78□□□□□ -2.12
TDA11P38854 YMR304C-AYMR304C-A 351 nt1.78□□□□□ -2.12
TDA11P38854 YNL150WYNL150W 408 nt1.78□□□□□ -2.12
TDA11P38854 BRO1YPL084W 2535 nt1.78□□□□□ -2.12
TDA11P38854 CDC60YPL160W 3273 nt1.78□□□□□ -2.13
TDA11P38854 GAL80YML051W 1308 nt1.77□□□□□ -2.13
TDA11P38854 YCR081C-AYCR081C-A 237 nt1.77□□□□□ -2.13
TDA11P38854 YDL025W-AYDL025W-A 105 nt1.77□□□□□ -2.13
TDA11P38854 YPS5YGL259W 498 nt1.77□□□□□ -2.13
TDA11P38854 GRX8YLR364W 330 nt1.77□□□□□ -2.13
TDA11P38854 LEU3YLR451W 2661 nt1.76□□□□□ -2.13
TDA11P38854 YFL002W-BYFL002W-B 1317 nt1.76□□□□□ -2.13
TDA11P38854 YGR161W-AYGR161W-A 1317 nt1.76□□□□□ -2.13
TDA11P38854 YBL100W-AYBL100W-A 1317 nt1.76□□□□□ -2.13
TDA11P38854 YCL020WYCL020W 1317 nt1.76□□□□□ -2.13
TDA11P38854 GPM2YDL021W 936 nt1.76□□□□□ -2.13
TDA11P38854 UBC5YDR059C 447 nt1.76□□□□□ -2.13
TDA11P38854 YOR105WYOR105W 327 nt1.76□□□□□ -2.13
TDA11P38854 RPB5YBR154C 648 nt1.76□□□□□ -2.13
TDA11P38854 LHS1YKL073W 2646 nt1.76□□□□□ -2.13
TDA11P38854 YGR109W-BYGR109W-B 4644 nt1.76□□□□□ -2.13
TDA11P38854 VPS34YLR240W 2628 nt1.75□□□□□ -2.13
TDA11P38854 YKR051WYKR051W 1257 nt1.75□□□□□ -2.13
TDA11P38854 YHC1YLR298C 696 nt1.75□□□□□ -2.13
TDA11P38854 ATP15YPL271W 189 nt1.75□□□□□ -2.13
TDA11P38854 SPE1YKL184W 1401 nt1.74□□□□□ -2.13
TDA11P38854 MYO2YOR326W 4725 nt1.74□□□□□ -2.13
TDA11P38854 DFG16YOR030W 1860 nt1.74□□□□□ -2.13
TDA11P38854 CDC50YCR094W 1176 nt1.74□□□□□ -2.13
TDA11P38854 RPL37BYDR500C 267 nt1.74□□□□□ -2.13
TDA11P38854 YER038W-AYER038W-A 381 nt1.74□□□□□ -2.13
TDA11P38854 YGL014C-AYGL014C-A 162 nt1.74□□□□□ -2.13
TDA11P38854 DFG10YIL049W 762 nt1.74□□□□□ -2.13
TDA11P38854 BUD19YJL188C 309 nt1.74□□□□□ -2.13
TDA11P38854 YPL039WYPL039W 951 nt1.74□□□□□ -2.13
TDA11P38854 snR5snR5 204 nt1.73□□□□□ -2.13
TDA11P38854 TMA20YER007C-A 546 nt1.73□□□□□ -2.13
TDA11P38854 YHR054CYHR054C 1065 nt1.73□□□□□ -2.13
TDA11P38854 CMS1YLR003C 876 nt1.73□□□□□ -2.13
TDA11P38854 HRI1YLR301W 735 nt1.73□□□□□ -2.13
TDA11P38854 PEP1YBL017C 4740 nt1.73□□□□□ -2.13
TDA11P38854 DPB11YJL090C 2295 nt1.73□□□□□ -2.13
TDA11P38854 CAT2YML042W 2013 nt1.73□□□□□ -2.13
TDA11P38854 STB4YMR019W 2850 nt1.73□□□□□ -2.13
TDA11P38854 SWT1YOR166C 1377 nt1.72□□□□□ -2.13
TDA11P38854 HER1YOR227W 3741 nt1.72□□□□□ -2.13
TDA11P38854 SAC3YDR159W 3906 nt1.72□□□□□ -2.13
TDA11P38854 SPC72YAL047C 1869 nt1.72□□□□□ -2.13
TDA11P38854 RLP24YLR009W 600 nt1.72□□□□□ -2.13
TDA11P38854 TEN1YLR010C 483 nt1.72□□□□□ -2.13
TDA11P38854 ARV1YLR242C 966 nt1.72□□□□□ -2.13
TDA11P38854 ROX1YPR065W 1107 nt1.72□□□□□ -2.13
TDA11P38854 VPS35YJL154C 2835 nt1.72□□□□□ -2.13
TDA11P38854 SYH1YPL105C 2550 nt1.72□□□□□ -2.13
TDA11P38854 YLR035C-AYLR035C-A 3468 nt1.72□□□□□ -2.13
TDA11P38854 BET4YJL031C 984 nt1.71□□□□□ -2.14
TDA11P38854 ECM9YKR004C 1134 nt1.71□□□□□ -2.14
TDA11P38854 YMR013C-AYMR013C-A 150 nt1.71□□□□□ -2.14
TDA11P38854 ARP7YPR034W 1434 nt1.71□□□□□ -2.14
TDA11P38854 SLM1YIL105C 2061 nt1.71□□□□□ -2.14
TDA11P38854 YNL144CYNL144C 2223 nt1.71□□□□□ -2.14
TDA11P38854 YDR341CYDR341C 1824 nt1.7□□□□□ -2.14
TDA11P38854 YCR087C-AYCR087C-A 462 nt1.7□□□□□ -2.14
TDA11P38854 RNR4YGR180C 1038 nt1.7□□□□□ -2.14
TDA11P38854 ANS1YHR126C 480 nt1.7□□□□□ -2.14
TDA11P38854 YJR087WYJR087W 351 nt1.7□□□□□ -2.14
TDA11P38854 YNL319WYNL319W 441 nt1.7□□□□□ -2.14
TDA11P38854 GRR1YJR090C 3456 nt1.7□□□□□ -2.14
TDA11P38854 YLR422WYLR422W 5799 nt1.7□□□□□ -2.14
TDA11P38854 TDA9YML081W 3756 nt1.7□□□□□ -2.14
TDA11P38854 CHC1YGL206C 4962 nt1.69□□□□□ -2.14
TDA11P38854 IRC20YLR247C 4671 nt1.69□□□□□ -2.14
TDA11P38854 YGR228WYGR228W 345 nt1.69□□□□□ -2.14
TDA11P38854 tR(UCU)Q1tR(UCU)Q1 73 nt1.69□□□□□ -2.14
TDA11P38854 TMA7YLR262C-A 195 nt1.69□□□□□ -2.14
TDA11P38854 YML084WYML084W 309 nt1.69□□□□□ -2.14
TDA11P38854 URA10YMR271C 684 nt1.69□□□□□ -2.14
TDA11P38854 YMR272W-BYMR272W-B 108 nt1.69□□□□□ -2.14
TDA11P38854 RPS7BYNL096C 573 nt1.69□□□□□ -2.14
TDA11P38854 RPB11YOL005C 363 nt1.69□□□□□ -2.14
TDA11P38854 YOR394C-AYOR394C-A 168 nt1.69□□□□□ -2.14
TDA11P38854 YPL238CYPL238C 390 nt1.69□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 98.7 ms