Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHB8Q9UN66 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
PCDHB8Q9UN66 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB8Q9UN66 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB8Q9UN66 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB8Q9UN66 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB8Q9UN66 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
PCDHB8Q9UN66 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB8Q9UN66 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.16■■■□□ 2.1
PCDHB8Q9UN66 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
PCDHB8Q9UN66 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
PCDHB8Q9UN66 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.16■■■□□ 2.1
PCDHB8Q9UN66 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB8Q9UN66 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.16■■■□□ 2.1
PCDHB8Q9UN66 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHB8Q9UN66 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.14■■■□□ 2.1
PCDHB8Q9UN66 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
PCDHB8Q9UN66 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB8Q9UN66 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.12■■■□□ 2.09
PCDHB8Q9UN66 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB8Q9UN66 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.11■■■□□ 2.09
PCDHB8Q9UN66 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB8Q9UN66 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
PCDHB8Q9UN66 AC010864.1-201ENST00000609407 1511 ntBASIC28.1■■■□□ 2.09
PCDHB8Q9UN66 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
PCDHB8Q9UN66 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
PCDHB8Q9UN66 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.1■■■□□ 2.09
PCDHB8Q9UN66 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB8Q9UN66 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.09■■■□□ 2.09
PCDHB8Q9UN66 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHB8Q9UN66 HLA-V-202ENST00000446817 847 ntBASIC28.08■■■□□ 2.09
PCDHB8Q9UN66 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.07■■■□□ 2.08
PCDHB8Q9UN66 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHB8Q9UN66 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.06■■■□□ 2.08
PCDHB8Q9UN66 LINC01971-201ENST00000617888 1048 ntBASIC28.06■■■□□ 2.08
PCDHB8Q9UN66 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHB8Q9UN66 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHB8Q9UN66 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHB8Q9UN66 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHB8Q9UN66 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHB8Q9UN66 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.03■■■□□ 2.08
PCDHB8Q9UN66 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHB8Q9UN66 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHB8Q9UN66 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.02■■■□□ 2.08
PCDHB8Q9UN66 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.02■■■□□ 2.08
PCDHB8Q9UN66 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.01■■■□□ 2.07
PCDHB8Q9UN66 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHB8Q9UN66 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28■■■□□ 2.07
PCDHB8Q9UN66 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28■■■□□ 2.07
PCDHB8Q9UN66 DUX4L11-201ENST00000611504 1267 ntBASIC28■■■□□ 2.07
PCDHB8Q9UN66 DUX4L12-201ENST00000614593 1267 ntBASIC28■■■□□ 2.07
PCDHB8Q9UN66 DUX4L14-201ENST00000621227 1267 ntBASIC28■■■□□ 2.07
PCDHB8Q9UN66 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
PCDHB8Q9UN66 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHB8Q9UN66 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHB8Q9UN66 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
PCDHB8Q9UN66 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PCDHB8Q9UN66 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.95■■■□□ 2.06
PCDHB8Q9UN66 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.94■■■□□ 2.06
PCDHB8Q9UN66 AL135925.1-201ENST00000605920 1701 ntBASIC27.93■■■□□ 2.06
PCDHB8Q9UN66 MIR3648-2-201ENST00000581792 180 ntBASIC27.93■■■□□ 2.06
PCDHB8Q9UN66 MIR3648-1-201ENST00000615959 180 ntBASIC27.93■■■□□ 2.06
PCDHB8Q9UN66 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHB8Q9UN66 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.92■■■□□ 2.06
PCDHB8Q9UN66 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHB8Q9UN66 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.92■■■□□ 2.06
PCDHB8Q9UN66 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.92■■■□□ 2.06
PCDHB8Q9UN66 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.92■■■□□ 2.06
PCDHB8Q9UN66 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.91■■■□□ 2.06
PCDHB8Q9UN66 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.91■■■□□ 2.06
PCDHB8Q9UN66 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.91■■■□□ 2.06
PCDHB8Q9UN66 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHB8Q9UN66 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PCDHB8Q9UN66 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
PCDHB8Q9UN66 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.88■■■□□ 2.05
PCDHB8Q9UN66 AC016575.1-201ENST00000607026 382 ntBASIC27.88■■■□□ 2.05
PCDHB8Q9UN66 CR559946.2-201ENST00000623684 991 ntBASIC27.88■■■□□ 2.05
PCDHB8Q9UN66 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCDHB8Q9UN66 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
PCDHB8Q9UN66 MIR639-201ENST00000384974 98 ntBASIC27.87■■■□□ 2.05
PCDHB8Q9UN66 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.87■■■□□ 2.05
PCDHB8Q9UN66 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHB8Q9UN66 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.86■■■□□ 2.05
PCDHB8Q9UN66 LINC00273-201ENST00000539813 1452 ntBASIC27.86■■■□□ 2.05
PCDHB8Q9UN66 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHB8Q9UN66 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.85■■■□□ 2.05
PCDHB8Q9UN66 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHB8Q9UN66 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHB8Q9UN66 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHB8Q9UN66 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHB8Q9UN66 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.84■■■□□ 2.05
PCDHB8Q9UN66 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHB8Q9UN66 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHB8Q9UN66 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHB8Q9UN66 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.83■■■□□ 2.05
PCDHB8Q9UN66 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHB8Q9UN66 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.83■■■□□ 2.05
PCDHB8Q9UN66 DUX4L13-201ENST00000554103 1267 ntBASIC27.83■■■□□ 2.05
PCDHB8Q9UN66 DUX4L15-201ENST00000611059 1267 ntBASIC27.83■■■□□ 2.05
PCDHB8Q9UN66 DUX4L23-201ENST00000615195 1269 ntBASIC27.83■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms