Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
PTPN23Q9H3S7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
PTPN23Q9H3S7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC40.37■■■■■ 4.05
PTPN23Q9H3S7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC40.37■■■■■ 4.05
PTPN23Q9H3S7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC40.37■■■■■ 4.05
PTPN23Q9H3S7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
PTPN23Q9H3S7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC40.34■■■■■ 4.05
PTPN23Q9H3S7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC40.33■■■■■ 4.05
PTPN23Q9H3S7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC40.33■■■■■ 4.05
PTPN23Q9H3S7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
PTPN23Q9H3S7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC40.33■■■■■ 4.05
PTPN23Q9H3S7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
PTPN23Q9H3S7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC40.31■■■■■ 4.04
PTPN23Q9H3S7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC40.3■■■■■ 4.04
PTPN23Q9H3S7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC40.29■■■■■ 4.04
PTPN23Q9H3S7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC40.29■■■■■ 4.04
PTPN23Q9H3S7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC40.27■■■■■ 4.04
PTPN23Q9H3S7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
PTPN23Q9H3S7 AC010864.1-201ENST00000609407 1511 ntBASIC40.26■■■■■ 4.04
PTPN23Q9H3S7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC40.26■■■■■ 4.04
PTPN23Q9H3S7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC40.25■■■■■ 4.03
PTPN23Q9H3S7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC40.25■■■■■ 4.03
PTPN23Q9H3S7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC40.24■■■■■ 4.03
PTPN23Q9H3S7 LINC01971-201ENST00000617888 1048 ntBASIC40.24■■■■■ 4.03
PTPN23Q9H3S7 CR559946.2-201ENST00000623684 991 ntBASIC40.24■■■■■ 4.03
PTPN23Q9H3S7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
PTPN23Q9H3S7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC40.22■■■■■ 4.03
PTPN23Q9H3S7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC40.22■■■■■ 4.03
PTPN23Q9H3S7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC40.21■■■■■ 4.03
PTPN23Q9H3S7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
PTPN23Q9H3S7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC40.19■■■■■ 4.02
PTPN23Q9H3S7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
PTPN23Q9H3S7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
PTPN23Q9H3S7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC40.16■■■■■ 4.02
PTPN23Q9H3S7 DUX4L11-201ENST00000611504 1267 ntBASIC40.15■■■■■ 4.02
PTPN23Q9H3S7 DUX4L12-201ENST00000614593 1267 ntBASIC40.15■■■■■ 4.02
PTPN23Q9H3S7 DUX4L14-201ENST00000621227 1267 ntBASIC40.15■■■■■ 4.02
PTPN23Q9H3S7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
PTPN23Q9H3S7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC40.14■■■■■ 4.02
PTPN23Q9H3S7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC40.14■■■■■ 4.02
PTPN23Q9H3S7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC40.13■■■■■ 4.02
PTPN23Q9H3S7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC40.13■■■■■ 4.01
PTPN23Q9H3S7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC40.12■■■■■ 4.01
PTPN23Q9H3S7 MIR3648-2-201ENST00000581792 180 ntBASIC40.12■■■■■ 4.01
PTPN23Q9H3S7 MIR3648-1-201ENST00000615959 180 ntBASIC40.12■■■■■ 4.01
PTPN23Q9H3S7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
PTPN23Q9H3S7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
PTPN23Q9H3S7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
PTPN23Q9H3S7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
PTPN23Q9H3S7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
PTPN23Q9H3S7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC40.09■■■■■ 4.01
PTPN23Q9H3S7 AC016575.1-201ENST00000607026 382 ntBASIC40.09■■■■■ 4.01
PTPN23Q9H3S7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC40.07■■■■■ 4.01
PTPN23Q9H3S7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC40.07■■■■■ 4.01
PTPN23Q9H3S7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC40.07■■■■■ 4.01
PTPN23Q9H3S7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC40.07■■■■■ 4
PTPN23Q9H3S7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC40.06■■■■■ 4
PTPN23Q9H3S7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC40.05■■■■■ 4
PTPN23Q9H3S7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC40.05■■■■■ 4
PTPN23Q9H3S7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
PTPN23Q9H3S7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
PTPN23Q9H3S7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC40.04■■■■■ 4
PTPN23Q9H3S7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC40.04■■■■■ 4
PTPN23Q9H3S7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
PTPN23Q9H3S7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC40.03■■■■■ 4
PTPN23Q9H3S7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC40.02■■■■■ 4
PTPN23Q9H3S7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC40.02■■■■■ 4
PTPN23Q9H3S7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
PTPN23Q9H3S7 LINC00273-201ENST00000539813 1452 ntBASIC40.02■■■■■ 4
PTPN23Q9H3S7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
PTPN23Q9H3S7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
PTPN23Q9H3S7 MIR639-201ENST00000384974 98 ntBASIC40■■■■□ 3.99
PTPN23Q9H3S7 MIR4449-201ENST00000578365 66 ntBASIC40■■■■□ 3.99
PTPN23Q9H3S7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC40■■■■□ 3.99
PTPN23Q9H3S7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
PTPN23Q9H3S7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC39.99■■■■□ 3.99
PTPN23Q9H3S7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
PTPN23Q9H3S7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC39.98■■■■□ 3.99
PTPN23Q9H3S7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
PTPN23Q9H3S7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC39.98■■■■□ 3.99
PTPN23Q9H3S7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
PTPN23Q9H3S7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
PTPN23Q9H3S7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC39.95■■■■□ 3.99
PTPN23Q9H3S7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
PTPN23Q9H3S7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC39.95■■■■□ 3.99
PTPN23Q9H3S7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC39.95■■■■□ 3.99
PTPN23Q9H3S7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
PTPN23Q9H3S7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC39.94■■■■□ 3.99
PTPN23Q9H3S7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
PTPN23Q9H3S7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC39.92■■■■□ 3.98
PTPN23Q9H3S7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC39.91■■■■□ 3.98
PTPN23Q9H3S7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC39.91■■■■□ 3.98
PTPN23Q9H3S7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC39.9■■■■□ 3.98
PTPN23Q9H3S7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC39.9■■■■□ 3.98
PTPN23Q9H3S7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L13-201ENST00000554103 1267 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L15-201ENST00000611059 1267 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L23-201ENST00000615195 1269 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L24-201ENST00000617576 1269 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L22-201ENST00000618238 1269 ntBASIC39.89■■■■□ 3.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms