Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 FUN14YAL008W 597 nt9.3□□□□□ -0.92
PUF3Q07807 SFP1YLR403W 2052 nt9.3□□□□□ -0.92 RIP-Chip
PUF3Q07807 YDR509WYDR509W 348 nt9.29□□□□□ -0.92
PUF3Q07807 IMO32YGR031W 1029 nt9.29□□□□□ -0.92
PUF3Q07807 YKL133CYKL133C 1392 nt9.28□□□□□ -0.92
PUF3Q07807 ABZ2YMR289W 1125 nt9.28□□□□□ -0.92
PUF3Q07807 MRS6YOR370C 1812 nt9.26□□□□□ -0.93
PUF3Q07807 CCT5YJR064W 1689 nt9.26□□□□□ -0.93
PUF3Q07807 DAK2YFL053W 1776 nt9.25□□□□□ -0.93
PUF3Q07807 RRT8YOL048C 1029 nt9.25□□□□□ -0.93
PUF3Q07807 DLD3YEL071W 1491 nt9.24□□□□□ -0.93
PUF3Q07807 YEL008WYEL008W 381 nt9.24□□□□□ -0.93
PUF3Q07807 ZAP1YJL056C 2643 nt9.23□□□□□ -0.93
PUF3Q07807 ADE8YDR408C 645 nt9.23□□□□□ -0.93
PUF3Q07807 SNZ1YMR096W 894 nt9.23□□□□□ -0.93
PUF3Q07807 YMR209CYMR209C 1374 nt9.23□□□□□ -0.93
PUF3Q07807 YHR219WYHR219W 1875 nt9.22□□□□□ -0.93
PUF3Q07807 ITR2YOL103W 1830 nt9.2□□□□□ -0.94
PUF3Q07807 THI72YOR192C 1800 nt9.2□□□□□ -0.94 RIP-Chip
PUF3Q07807 YJR114WYJR114W 393 nt9.2□□□□□ -0.94 RIP-Chip
PUF3Q07807 LSR1LSR1 1175 nt9.2□□□□□ -0.94
PUF3Q07807 TIP1YBR067C 633 nt9.2□□□□□ -0.94
PUF3Q07807 YPR126CYPR126C 309 nt9.2□□□□□ -0.94
PUF3Q07807 IML3YBR107C 738 nt9.2□□□□□ -0.94 RIP-Chip
PUF3Q07807 SAC7YDR389W 1965 nt9.19□□□□□ -0.94
PUF3Q07807 RPD3YNL330C 1302 nt9.18□□□□□ -0.94 RIP-Chip
PUF3Q07807 STE4YOR212W 1272 nt9.17□□□□□ -0.94
PUF3Q07807 ILV2YMR108W 2064 nt9.16□□□□□ -0.94
PUF3Q07807 YFR036W-AYFR036W-A 651 nt9.16□□□□□ -0.94
PUF3Q07807 Q0144Q0144 330 nt9.16□□□□□ -0.94
PUF3Q07807 ODC1YPL134C 933 nt9.16□□□□□ -0.94
PUF3Q07807 CTI6YPL181W 1521 nt9.15□□□□□ -0.94
PUF3Q07807 DTR1YBR180W 1719 nt9.15□□□□□ -0.94
PUF3Q07807 TIM44YIL022W 1296 nt9.15□□□□□ -0.94 RIP-Chip
PUF3Q07807 TAF13YML098W 504 nt9.15□□□□□ -0.94
PUF3Q07807 VMA11YPL234C 495 nt9.15□□□□□ -0.94
PUF3Q07807 SPS100YHR139C 981 nt9.14□□□□□ -0.95
PUF3Q07807 YNR064CYNR064C 873 nt9.14□□□□□ -0.95
PUF3Q07807 SEM1YDR363W-A 270 nt9.13□□□□□ -0.95
PUF3Q07807 ELO1YJL196C 933 nt9.13□□□□□ -0.95
PUF3Q07807 SSL2YIL143C 2532 nt9.13□□□□□ -0.95
PUF3Q07807 TVP23YDR084C 600 nt9.12□□□□□ -0.95
PUF3Q07807 OPI3YJR073C 621 nt9.12□□□□□ -0.95
PUF3Q07807 MHF1YOL086W-A 273 nt9.11□□□□□ -0.95
PUF3Q07807 TOM20YGR082W 552 nt9.1□□□□□ -0.95 RIP-Chip
PUF3Q07807 CWP2YKL096W-A 279 nt9.1□□□□□ -0.95
PUF3Q07807 SNX3YOR357C 489 nt9.1□□□□□ -0.95
PUF3Q07807 DMA2YNL116W 1569 nt9.1□□□□□ -0.95
PUF3Q07807 MAE1YKL029C 2010 nt9.1□□□□□ -0.95
PUF3Q07807 KEL3YPL263C 1956 nt9.08□□□□□ -0.96
PUF3Q07807 CPD1YGR247W 720 nt9.08□□□□□ -0.96
PUF3Q07807 CYT1YOR065W 930 nt9.08□□□□□ -0.96
PUF3Q07807 ARP10YDR106W 855 nt9.07□□□□□ -0.96
PUF3Q07807 LCP5YER127W 1074 nt9.07□□□□□ -0.96
PUF3Q07807 ENO2YHR174W 1314 nt9.06□□□□□ -0.96
PUF3Q07807 POT1YIL160C 1254 nt9.06□□□□□ -0.96
PUF3Q07807 MDM35YKL053C-A 261 nt9.06□□□□□ -0.96
PUF3Q07807 YLR349WYLR349W 507 nt9.06□□□□□ -0.96
PUF3Q07807 YMR265CYMR265C 1386 nt9.06□□□□□ -0.96
PUF3Q07807 PSD1YNL169C 1503 nt9.05□□□□□ -0.96
PUF3Q07807 RPN14YGL004C 1254 nt9.05□□□□□ -0.96
PUF3Q07807 HAP5YOR358W 729 nt9.04□□□□□ -0.96 RIP-Chip
PUF3Q07807 KRR1YCL059C 951 nt9.03□□□□□ -0.96
PUF3Q07807 YMR262WYMR262W 942 nt9.03□□□□□ -0.96
PUF3Q07807 RFC1YOR217W 2586 nt9.02□□□□□ -0.97
PUF3Q07807 ADH7YCR105W 1086 nt9.02□□□□□ -0.97 RIP-Chip
PUF3Q07807 URH1YDR400W 1023 nt9.02□□□□□ -0.97
PUF3Q07807 RPC31YNL151C 756 nt9.02□□□□□ -0.97
PUF3Q07807 AMF1YOR378W 1548 nt9.01□□□□□ -0.97
PUF3Q07807 snR31snR31 225 nt9.01□□□□□ -0.97
PUF3Q07807 SUV3YPL029W 2214 nt9.01□□□□□ -0.97 RIP-Chip
PUF3Q07807 PAU15YIR041W 375 nt8.99□□□□□ -0.97
PUF3Q07807 ACO2YJL200C 2370 nt8.99□□□□□ -0.97
PUF3Q07807 AI5_BETAQ0075 1065 nt8.98□□□□□ -0.97
PUF3Q07807 PCP1YGR101W 1041 nt8.98□□□□□ -0.97
PUF3Q07807 GSF2YML048W 1212 nt8.97□□□□□ -0.97
PUF3Q07807 RIM2YBR192W 1134 nt8.97□□□□□ -0.97 RIP-Chip
PUF3Q07807 HEM14YER014W 1620 nt8.97□□□□□ -0.97
PUF3Q07807 SFL1YOR140W 2301 nt8.96□□□□□ -0.97
PUF3Q07807 RAD51YER095W 1203 nt8.96□□□□□ -0.98
PUF3Q07807 SWT21YNL187W 1074 nt8.96□□□□□ -0.98
PUF3Q07807 CRC1YOR100C 984 nt8.96□□□□□ -0.98
PUF3Q07807 MET1YKR069W 1782 nt8.96□□□□□ -0.98
PUF3Q07807 HMG2YLR450W 3138 nt8.95□□□□□ -0.98
PUF3Q07807 TPC1YGR096W 945 nt8.95□□□□□ -0.98
PUF3Q07807 KRE1YNL322C 942 nt8.95□□□□□ -0.98
PUF3Q07807 TPO4YOR273C 1980 nt8.95□□□□□ -0.98
PUF3Q07807 GTB1YDR221W 2109 nt8.95□□□□□ -0.98
PUF3Q07807 HXT10YFL011W 1641 nt8.94□□□□□ -0.98
PUF3Q07807 VAR1Q0140 1197 nt8.94□□□□□ -0.98
PUF3Q07807 DPL1YDR294C 1770 nt8.94□□□□□ -0.98
PUF3Q07807 GAL2YLR081W 1725 nt8.93□□□□□ -0.98
PUF3Q07807 YHR218WYHR218W 1812 nt8.92□□□□□ -0.98
PUF3Q07807 TUB4YLR212C 1422 nt8.92□□□□□ -0.98
PUF3Q07807 UTP6YDR449C 1323 nt8.92□□□□□ -0.98
PUF3Q07807 LEU2YCL018W 1095 nt8.92□□□□□ -0.98
PUF3Q07807 NIF3YGL221C 867 nt8.91□□□□□ -0.98
PUF3Q07807 YKL053WYKL053W 375 nt8.91□□□□□ -0.98
PUF3Q07807 INH1YDL181W 258 nt8.9□□□□□ -0.98
PUF3Q07807 PAU5YFL020C 369 nt8.9□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms