Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.62■■□□□ 1.69
PDX1P52945 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDX1P52945 LINC01971-201ENST00000617888 1048 ntBASIC25.62■■□□□ 1.69
PDX1P52945 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDX1P52945 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDX1P52945 CR559946.2-201ENST00000623684 991 ntBASIC25.61■■□□□ 1.69
PDX1P52945 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.61■■□□□ 1.69
PDX1P52945 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.61■■□□□ 1.69
PDX1P52945 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.6■■□□□ 1.69
PDX1P52945 DUX4L11-201ENST00000611504 1267 ntBASIC25.6■■□□□ 1.69
PDX1P52945 DUX4L12-201ENST00000614593 1267 ntBASIC25.6■■□□□ 1.69
PDX1P52945 DUX4L14-201ENST00000621227 1267 ntBASIC25.6■■□□□ 1.69
PDX1P52945 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDX1P52945 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PDX1P52945 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDX1P52945 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.59■■□□□ 1.69
PDX1P52945 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDX1P52945 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDX1P52945 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDX1P52945 AC120057.4-201ENST00000624722 1615 ntBASIC25.57■■□□□ 1.68
PDX1P52945 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.57■■□□□ 1.68
PDX1P52945 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDX1P52945 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
PDX1P52945 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDX1P52945 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
PDX1P52945 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDX1P52945 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
PDX1P52945 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.54■■□□□ 1.68
PDX1P52945 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDX1P52945 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDX1P52945 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.53■■□□□ 1.68
PDX1P52945 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PDX1P52945 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.52■■□□□ 1.68
PDX1P52945 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDX1P52945 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDX1P52945 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.49■■□□□ 1.67
PDX1P52945 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PDX1P52945 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDX1P52945 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDX1P52945 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.48■■□□□ 1.67
PDX1P52945 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.48■■□□□ 1.67
PDX1P52945 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDX1P52945 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDX1P52945 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDX1P52945 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PDX1P52945 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PDX1P52945 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PDX1P52945 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.45■■□□□ 1.66
PDX1P52945 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.45■■□□□ 1.66
PDX1P52945 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.44■■□□□ 1.66
PDX1P52945 HSD17B1P1-201ENST00000590052 955 ntBASIC25.44■■□□□ 1.66
PDX1P52945 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDX1P52945 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDX1P52945 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.43■■□□□ 1.66
PDX1P52945 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDX1P52945 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDX1P52945 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PDX1P52945 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.41■■□□□ 1.66
PDX1P52945 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
PDX1P52945 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
PDX1P52945 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PDX1P52945 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDX1P52945 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.37■■□□□ 1.65
PDX1P52945 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDX1P52945 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDX1P52945 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L13-201ENST00000554103 1267 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L15-201ENST00000611059 1267 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L23-201ENST00000615195 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L24-201ENST00000617576 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L22-201ENST00000618238 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L20-201ENST00000619712 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L21-201ENST00000622058 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L10-201ENST00000622460 1267 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L25-201ENST00000624915 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDX1P52945 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDX1P52945 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PDX1P52945 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDX1P52945 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.34■■□□□ 1.65
PDX1P52945 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.34■■□□□ 1.65
PDX1P52945 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PDX1P52945 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.34■■□□□ 1.65
PDX1P52945 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.32■■□□□ 1.64
PDX1P52945 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PDX1P52945 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDX1P52945 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.31■■□□□ 1.64
PDX1P52945 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDX1P52945 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms