Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 LSM5YER146W 282 nt7.06□□□□□ -1.28
RPB11P38902 TIP1YBR067C 633 nt7.06□□□□□ -1.28
RPB11P38902 TSC10YBR265W 963 nt7.06□□□□□ -1.28
RPB11P38902 MSC1YML128C 1542 nt7.06□□□□□ -1.28
RPB11P38902 BNI5YNL166C 1347 nt7.05□□□□□ -1.28
RPB11P38902 FUB1YCR076C 753 nt7.04□□□□□ -1.28
RPB11P38902 NAT4YMR069W 858 nt7.04□□□□□ -1.28
RPB11P38902 ORT1YOR130C 879 nt7.04□□□□□ -1.28
RPB11P38902 FET5YFL041W 1869 nt7.04□□□□□ -1.28
RPB11P38902 LEU4YNL104C 1860 nt7.03□□□□□ -1.28
RPB11P38902 YLR279WYLR279W 390 nt7.03□□□□□ -1.28
RPB11P38902 SNX3YOR357C 489 nt7.03□□□□□ -1.28
RPB11P38902 DPL1YDR294C 1770 nt7.03□□□□□ -1.28
RPB11P38902 LPD1YFL018C 1500 nt7.02□□□□□ -1.29
RPB11P38902 ITR2YOL103W 1830 nt7.02□□□□□ -1.29
RPB11P38902 ASP3-1YLR155C 1089 nt7.02□□□□□ -1.29
RPB11P38902 ASP3-2YLR157C 1089 nt7.02□□□□□ -1.29
RPB11P38902 ASP3-3YLR158C 1089 nt7.02□□□□□ -1.29
RPB11P38902 ASP3-4YLR160C 1089 nt7.02□□□□□ -1.29
RPB11P38902 DUR3YHL016C 2208 nt7.02□□□□□ -1.29
RPB11P38902 FCY21YER060W 1587 nt7.02□□□□□ -1.29
RPB11P38902 YRF1-1YDR545W 5391 nt7.01□□□□□ -1.29
RPB11P38902 YRF1-5YLR467W 5391 nt7.01□□□□□ -1.29
RPB11P38902 YRF1-8YOR396W 5391 nt7.01□□□□□ -1.29
RPB11P38902 FRA1YLL029W 2250 nt7.01□□□□□ -1.29
RPB11P38902 GPN2YOR262W 1044 nt7□□□□□ -1.29
RPB11P38902 ADE16YLR028C 1776 nt7□□□□□ -1.29
RPB11P38902 POP2YNR052C 1302 nt6.99□□□□□ -1.29
RPB11P38902 NPP2YEL016C 1482 nt6.98□□□□□ -1.29
RPB11P38902 MSB4YOL112W 1479 nt6.98□□□□□ -1.29
RPB11P38902 YDR467CYDR467C 327 nt6.97□□□□□ -1.29
RPB11P38902 HXT12YIL170W 1374 nt6.96□□□□□ -1.29
RPB11P38902 TAT2YOL020W 1779 nt6.96□□□□□ -1.3
RPB11P38902 tE(CUC)DtE(CUC)D 72 nt6.96□□□□□ -1.3
RPB11P38902 tE(CUC)ItE(CUC)I 72 nt6.96□□□□□ -1.3
RPB11P38902 NUC1YJL208C 990 nt6.96□□□□□ -1.3
RPB11P38902 snR4snR4 186 nt6.96□□□□□ -1.3
RPB11P38902 DUS3YLR401C 2007 nt6.95□□□□□ -1.3
RPB11P38902 SOL2YCR073W-A 948 nt6.95□□□□□ -1.3
RPB11P38902 YGR012WYGR012W 1182 nt6.95□□□□□ -1.3
RPB11P38902 TPN1YGL186C 1740 nt6.94□□□□□ -1.3
RPB11P38902 CSM1YCR086W 573 nt6.94□□□□□ -1.3
RPB11P38902 TOM71YHR117W 1920 nt6.93□□□□□ -1.3
RPB11P38902 RAS2YNL098C 969 nt6.93□□□□□ -1.3
RPB11P38902 NSG2YNL156C 900 nt6.93□□□□□ -1.3
RPB11P38902 HXT11YOL156W 1704 nt6.93□□□□□ -1.3
RPB11P38902 TRP2YER090W 1524 nt6.92□□□□□ -1.3
RPB11P38902 THI6YPL214C 1623 nt6.92□□□□□ -1.3
RPB11P38902 SDH5YOL071W 489 nt6.91□□□□□ -1.3
RPB11P38902 PRY1YJL079C 900 nt6.9□□□□□ -1.3
RPB11P38902 MCM5YLR274W 2328 nt6.9□□□□□ -1.31
RPB11P38902 GND1YHR183W 1470 nt6.9□□□□□ -1.31
RPB11P38902 RPN14YGL004C 1254 nt6.89□□□□□ -1.31
RPB11P38902 MET30YIL046W 1923 nt6.89□□□□□ -1.31
RPB11P38902 YMR265CYMR265C 1386 nt6.88□□□□□ -1.31
RPB11P38902 PFS2YNL317W 1398 nt6.88□□□□□ -1.31
RPB11P38902 DIA4YHR011W 1341 nt6.88□□□□□ -1.31
RPB11P38902 EMC3YKL207W 762 nt6.88□□□□□ -1.31
RPB11P38902 YNL190WYNL190W 615 nt6.88□□□□□ -1.31
RPB11P38902 YBL095WYBL095W 813 nt6.88□□□□□ -1.31
RPB11P38902 OYE2YHR179W 1203 nt6.87□□□□□ -1.31
RPB11P38902 EAF3YPR023C 1206 nt6.87□□□□□ -1.31
RPB11P38902 SAM3YPL274W 1764 nt6.87□□□□□ -1.31
RPB11P38902 YDR455CYDR455C 309 nt6.86□□□□□ -1.31
RPB11P38902 YPL222C-AYPL222C-A 246 nt6.86□□□□□ -1.31
RPB11P38902 RPT5YOR117W 1305 nt6.85□□□□□ -1.31
RPB11P38902 YMR210WYMR210W 1350 nt6.84□□□□□ -1.31
RPB11P38902 LOT5YKL183W 921 nt6.84□□□□□ -1.31
RPB11P38902 HAP5YOR358W 729 nt6.84□□□□□ -1.31
RPB11P38902 RAD23YEL037C 1197 nt6.83□□□□□ -1.32
RPB11P38902 ERG13YML126C 1476 nt6.83□□□□□ -1.32
RPB11P38902 SRM1YGL097W 1449 nt6.83□□□□□ -1.32
RPB11P38902 AAT1YKL106W 1356 nt6.82□□□□□ -1.32
RPB11P38902 SAC7YDR389W 1965 nt6.82□□□□□ -1.32
RPB11P38902 SLM3YDL033C 1254 nt6.82□□□□□ -1.32
RPB11P38902 YJL118WYJL118W 660 nt6.82□□□□□ -1.32
RPB11P38902 GPM1YKL152C 744 nt6.82□□□□□ -1.32
RPB11P38902 YMC2YBR104W 990 nt6.82□□□□□ -1.32
RPB11P38902 YLR173WYLR173W 1827 nt6.82□□□□□ -1.32
RPB11P38902 HSV2YGR223C 1347 nt6.81□□□□□ -1.32
RPB11P38902 SMM1YNR015W 1155 nt6.81□□□□□ -1.32
RPB11P38902 MDH2YOL126C 1134 nt6.81□□□□□ -1.32
RPB11P38902 SFL1YOR140W 2301 nt6.81□□□□□ -1.32
RPB11P38902 TPS1YBR126C 1488 nt6.79□□□□□ -1.32
RPB11P38902 RRT8YOL048C 1029 nt6.78□□□□□ -1.32
RPB11P38902 FTH1YBR207W 1398 nt6.78□□□□□ -1.32
RPB11P38902 ALR1YOL130W 2580 nt6.77□□□□□ -1.33
RPB11P38902 DDI1YER143W 1287 nt6.77□□□□□ -1.33
RPB11P38902 ELO1YJL196C 933 nt6.77□□□□□ -1.33
RPB11P38902 YNR064CYNR064C 873 nt6.77□□□□□ -1.33
RPB11P38902 LAS17YOR181W 1902 nt6.77□□□□□ -1.33
RPB11P38902 RIB3YDR487C 627 nt6.76□□□□□ -1.33
RPB11P38902 TMA23YMR269W 636 nt6.76□□□□□ -1.33
RPB11P38902 KEL3YPL263C 1956 nt6.75□□□□□ -1.33
RPB11P38902 RTG2YGL252C 1767 nt6.75□□□□□ -1.33
RPB11P38902 AIM34YMR003W 597 nt6.75□□□□□ -1.33
RPB11P38902 snR31snR31 225 nt6.75□□□□□ -1.33
RPB11P38902 MAS1YLR163C 1389 nt6.74□□□□□ -1.33
RPB11P38902 RIB7YBR153W 735 nt6.74□□□□□ -1.33
RPB11P38902 SUV3YPL029W 2214 nt6.74□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 69 ms