Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.18■■■□□ 2.1
SYN3O14994 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SYN3O14994 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SYN3O14994 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SYN3O14994 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SYN3O14994 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.15■■■□□ 2.1
SYN3O14994 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.15■■■□□ 2.1
SYN3O14994 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SYN3O14994 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SYN3O14994 LINC01971-201ENST00000617888 1048 ntBASIC28.13■■■□□ 2.09
SYN3O14994 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.12■■■□□ 2.09
SYN3O14994 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SYN3O14994 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.11■■■□□ 2.09
SYN3O14994 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SYN3O14994 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.11■■■□□ 2.09
SYN3O14994 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SYN3O14994 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.1■■■□□ 2.09
SYN3O14994 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SYN3O14994 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SYN3O14994 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.09■■■□□ 2.09
SYN3O14994 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.08■■■□□ 2.09
SYN3O14994 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SYN3O14994 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SYN3O14994 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SYN3O14994 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.06■■■□□ 2.08
SYN3O14994 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SYN3O14994 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
SYN3O14994 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SYN3O14994 AC010864.1-201ENST00000609407 1511 ntBASIC28.05■■■□□ 2.08
SYN3O14994 DUX4L11-201ENST00000611504 1267 ntBASIC28.05■■■□□ 2.08
SYN3O14994 DUX4L12-201ENST00000614593 1267 ntBASIC28.05■■■□□ 2.08
SYN3O14994 DUX4L14-201ENST00000621227 1267 ntBASIC28.05■■■□□ 2.08
SYN3O14994 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.05■■■□□ 2.08
SYN3O14994 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.03■■■□□ 2.08
SYN3O14994 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.02■■■□□ 2.08
SYN3O14994 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.02■■■□□ 2.08
SYN3O14994 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SYN3O14994 MIR3648-2-201ENST00000581792 180 ntBASIC28.01■■■□□ 2.07
SYN3O14994 MIR3648-1-201ENST00000615959 180 ntBASIC28.01■■■□□ 2.07
SYN3O14994 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
SYN3O14994 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28■■■□□ 2.07
SYN3O14994 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
SYN3O14994 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.99■■■□□ 2.07
SYN3O14994 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SYN3O14994 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.98■■■□□ 2.07
SYN3O14994 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SYN3O14994 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SYN3O14994 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
SYN3O14994 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.98■■■□□ 2.07
SYN3O14994 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SYN3O14994 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SYN3O14994 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SYN3O14994 MIR639-201ENST00000384974 98 ntBASIC27.97■■■□□ 2.07
SYN3O14994 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.97■■■□□ 2.07
SYN3O14994 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.96■■■□□ 2.07
SYN3O14994 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.96■■■□□ 2.07
SYN3O14994 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.96■■■□□ 2.07
SYN3O14994 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SYN3O14994 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
SYN3O14994 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
SYN3O14994 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SYN3O14994 CR559946.2-201ENST00000623684 991 ntBASIC27.94■■■□□ 2.06
SYN3O14994 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SYN3O14994 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.93■■■□□ 2.06
SYN3O14994 AC016575.1-201ENST00000607026 382 ntBASIC27.93■■■□□ 2.06
SYN3O14994 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
SYN3O14994 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SYN3O14994 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SYN3O14994 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SYN3O14994 MIR4449-201ENST00000578365 66 ntBASIC27.9■■■□□ 2.06
SYN3O14994 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SYN3O14994 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SYN3O14994 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
SYN3O14994 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SYN3O14994 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
SYN3O14994 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
SYN3O14994 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SYN3O14994 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L13-201ENST00000554103 1267 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L15-201ENST00000611059 1267 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L23-201ENST00000615195 1269 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L24-201ENST00000617576 1269 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L22-201ENST00000618238 1269 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L20-201ENST00000619712 1269 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L21-201ENST00000622058 1269 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L10-201ENST00000622460 1267 ntBASIC27.88■■■□□ 2.05
SYN3O14994 DUX4L25-201ENST00000624915 1269 ntBASIC27.88■■■□□ 2.05
SYN3O14994 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.87■■■□□ 2.05
SYN3O14994 LINC00273-201ENST00000539813 1452 ntBASIC27.87■■■□□ 2.05
SYN3O14994 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SYN3O14994 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SYN3O14994 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SYN3O14994 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.85■■■□□ 2.05
SYN3O14994 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SYN3O14994 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SYN3O14994 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.84■■■□□ 2.05
SYN3O14994 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.84■■■□□ 2.05
SYN3O14994 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
SYN3O14994 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.84■■■□□ 2.05
SYN3O14994 AL135925.1-201ENST00000605920 1701 ntBASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms