Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.22■■■□□ 2.27
SMIM35A0A1B0GVV1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SMIM35A0A1B0GVV1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.2■■■□□ 2.26
SMIM35A0A1B0GVV1 LINC01971-201ENST00000617888 1048 ntBASIC29.2■■■□□ 2.26
SMIM35A0A1B0GVV1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.18■■■□□ 2.26
SMIM35A0A1B0GVV1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMIM35A0A1B0GVV1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.16■■■□□ 2.26
SMIM35A0A1B0GVV1 DUX4L11-201ENST00000611504 1267 ntBASIC29.16■■■□□ 2.26
SMIM35A0A1B0GVV1 DUX4L12-201ENST00000614593 1267 ntBASIC29.16■■■□□ 2.26
SMIM35A0A1B0GVV1 DUX4L14-201ENST00000621227 1267 ntBASIC29.16■■■□□ 2.26
SMIM35A0A1B0GVV1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.15■■■□□ 2.26
SMIM35A0A1B0GVV1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SMIM35A0A1B0GVV1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.14■■■□□ 2.26
SMIM35A0A1B0GVV1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.14■■■□□ 2.26
SMIM35A0A1B0GVV1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.13■■■□□ 2.25
SMIM35A0A1B0GVV1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SMIM35A0A1B0GVV1 MIR3648-2-201ENST00000581792 180 ntBASIC29.13■■■□□ 2.25
SMIM35A0A1B0GVV1 MIR3648-1-201ENST00000615959 180 ntBASIC29.13■■■□□ 2.25
SMIM35A0A1B0GVV1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SMIM35A0A1B0GVV1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
SMIM35A0A1B0GVV1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.12■■■□□ 2.25
SMIM35A0A1B0GVV1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SMIM35A0A1B0GVV1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.11■■■□□ 2.25
SMIM35A0A1B0GVV1 MIR639-201ENST00000384974 98 ntBASIC29.1■■■□□ 2.25
SMIM35A0A1B0GVV1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.1■■■□□ 2.25
SMIM35A0A1B0GVV1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SMIM35A0A1B0GVV1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.09■■■□□ 2.25
SMIM35A0A1B0GVV1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SMIM35A0A1B0GVV1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.08■■■□□ 2.25
SMIM35A0A1B0GVV1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.07■■■□□ 2.24
SMIM35A0A1B0GVV1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.07■■■□□ 2.24
SMIM35A0A1B0GVV1 AC016575.1-201ENST00000607026 382 ntBASIC29.07■■■□□ 2.24
SMIM35A0A1B0GVV1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.06■■■□□ 2.24
SMIM35A0A1B0GVV1 MIR4449-201ENST00000578365 66 ntBASIC29.05■■■□□ 2.24
SMIM35A0A1B0GVV1 CR559946.2-201ENST00000623684 991 ntBASIC29.05■■■□□ 2.24
SMIM35A0A1B0GVV1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
SMIM35A0A1B0GVV1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
SMIM35A0A1B0GVV1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SMIM35A0A1B0GVV1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
SMIM35A0A1B0GVV1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
SMIM35A0A1B0GVV1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.03■■■□□ 2.24
SMIM35A0A1B0GVV1 AC010864.1-201ENST00000609407 1511 ntBASIC29.03■■■□□ 2.24
SMIM35A0A1B0GVV1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SMIM35A0A1B0GVV1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.03■■■□□ 2.24
SMIM35A0A1B0GVV1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMIM35A0A1B0GVV1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
SMIM35A0A1B0GVV1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMIM35A0A1B0GVV1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMIM35A0A1B0GVV1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMIM35A0A1B0GVV1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMIM35A0A1B0GVV1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMIM35A0A1B0GVV1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SMIM35A0A1B0GVV1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29■■■□□ 2.23
SMIM35A0A1B0GVV1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
SMIM35A0A1B0GVV1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SMIM35A0A1B0GVV1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SMIM35A0A1B0GVV1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SMIM35A0A1B0GVV1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SMIM35A0A1B0GVV1 DUX4L13-201ENST00000554103 1267 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L15-201ENST00000611059 1267 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L23-201ENST00000615195 1269 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L24-201ENST00000617576 1269 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L22-201ENST00000618238 1269 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L20-201ENST00000619712 1269 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L21-201ENST00000622058 1269 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L10-201ENST00000622460 1267 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 DUX4L25-201ENST00000624915 1269 ntBASIC28.95■■■□□ 2.22
SMIM35A0A1B0GVV1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.94■■■□□ 2.22
SMIM35A0A1B0GVV1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMIM35A0A1B0GVV1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMIM35A0A1B0GVV1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMIM35A0A1B0GVV1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SMIM35A0A1B0GVV1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.93■■■□□ 2.22
SMIM35A0A1B0GVV1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.92■■■□□ 2.22
SMIM35A0A1B0GVV1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SMIM35A0A1B0GVV1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SMIM35A0A1B0GVV1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SMIM35A0A1B0GVV1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SMIM35A0A1B0GVV1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
SMIM35A0A1B0GVV1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
SMIM35A0A1B0GVV1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMIM35A0A1B0GVV1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SMIM35A0A1B0GVV1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.89■■■□□ 2.21
SMIM35A0A1B0GVV1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.88■■■□□ 2.21
SMIM35A0A1B0GVV1 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.88■■■□□ 2.21
SMIM35A0A1B0GVV1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMIM35A0A1B0GVV1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.87■■■□□ 2.21
SMIM35A0A1B0GVV1 LINC00273-201ENST00000539813 1452 ntBASIC28.87■■■□□ 2.21
SMIM35A0A1B0GVV1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMIM35A0A1B0GVV1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMIM35A0A1B0GVV1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMIM35A0A1B0GVV1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMIM35A0A1B0GVV1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMIM35A0A1B0GVV1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SMIM35A0A1B0GVV1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.86■■■□□ 2.21
SMIM35A0A1B0GVV1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.86■■■□□ 2.21
SMIM35A0A1B0GVV1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.86■■■□□ 2.21
SMIM35A0A1B0GVV1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SMIM35A0A1B0GVV1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
SMIM35A0A1B0GVV1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms