Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 DUX4L16-201ENST00000555130 1264 ntBASIC19.73■□□□□ 0.75
KRT78Q8N1N4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.72■□□□□ 0.75
KRT78Q8N1N4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 FAM21FP-204ENST00000608637 956 ntBASIC19.72■□□□□ 0.75
KRT78Q8N1N4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT78Q8N1N4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 AC231657.2-201ENST00000624556 255 ntBASIC19.71■□□□□ 0.75
KRT78Q8N1N4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT78Q8N1N4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
KRT78Q8N1N4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 AL137784.2-201ENST00000607332 1000 ntBASIC19.69■□□□□ 0.74
KRT78Q8N1N4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT78Q8N1N4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms