Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 UPS1YLR193C 528 nt3.86□□□□□ -1.79
TY1A-MR1Q04215 YNL067W-BYNL067W-B 141 nt3.86□□□□□ -1.79
TY1A-MR1Q04215 SGF11YPL047W 300 nt3.86□□□□□ -1.79
TY1A-MR1Q04215 CWC22YGR278W 1734 nt3.86□□□□□ -1.79
TY1A-MR1Q04215 ASG1YIL130W 2895 nt3.86□□□□□ -1.79
TY1A-MR1Q04215 CHL1YPL008W 2586 nt3.86□□□□□ -1.79
TY1A-MR1Q04215 RED1YLR263W 2484 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 SLP1YOR154W 1764 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 snR61snR61 90 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 YEL073CYEL073C 324 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 tS(AGA)D3tS(AGA)D3 83 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 POG1YIL122W 1056 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 VIP1YLR410W 3441 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 PUF6YDR496C 1971 nt3.85□□□□□ -1.79
TY1A-MR1Q04215 NAM2YLR382C 2685 nt3.84□□□□□ -1.79
TY1A-MR1Q04215 SNC2YOR327C 348 nt3.84□□□□□ -1.79
TY1A-MR1Q04215 JJJ2YJL162C 1752 nt3.84□□□□□ -1.8
TY1A-MR1Q04215 LYS2YBR115C 4179 nt3.84□□□□□ -1.8
TY1A-MR1Q04215 SPO21YOL091W 1830 nt3.84□□□□□ -1.8
TY1A-MR1Q04215 FRE8YLR047C 2061 nt3.83□□□□□ -1.8
TY1A-MR1Q04215 PDC2YDR081C 2778 nt3.83□□□□□ -1.8
TY1A-MR1Q04215 snR74snR74 88 nt3.83□□□□□ -1.8
TY1A-MR1Q04215 snR79snR79 84 nt3.83□□□□□ -1.8
TY1A-MR1Q04215 ULI1YFR026C 510 nt3.83□□□□□ -1.8
TY1A-MR1Q04215 ECM16YMR128W 3804 nt3.83□□□□□ -1.8
TY1A-MR1Q04215 CDC24YAL041W 2565 nt3.83□□□□□ -1.8
TY1A-MR1Q04215 CDC27YBL084C 2277 nt3.82□□□□□ -1.8
TY1A-MR1Q04215 NUP82YJL061W 2142 nt3.82□□□□□ -1.8
TY1A-MR1Q04215 YPR053CYPR053C 456 nt3.82□□□□□ -1.8
TY1A-MR1Q04215 YPR146CYPR146C 330 nt3.82□□□□□ -1.8
TY1A-MR1Q04215 GDH2YDL215C 3279 nt3.82□□□□□ -1.8
TY1A-MR1Q04215 SEA4YBL104C 3117 nt3.82□□□□□ -1.8
TY1A-MR1Q04215 OSH2YDL019C 3852 nt3.81□□□□□ -1.8
TY1A-MR1Q04215 PDS5YMR076C 3834 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 PMP1YCR024C-A 123 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 GEP4YHR100C 558 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 MRPL39YML009C 213 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 GIP4YAL031C 2283 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 HMG1YML075C 3165 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 HOS3YPL116W 2094 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 MIS1YBR084W 2928 nt3.8□□□□□ -1.8
TY1A-MR1Q04215 SSS1YDR086C 243 nt3.79□□□□□ -1.8
TY1A-MR1Q04215 RPS18AYDR450W 441 nt3.79□□□□□ -1.8
TY1A-MR1Q04215 GON7YJL184W 372 nt3.79□□□□□ -1.8
TY1A-MR1Q04215 RPL38YLR325C 237 nt3.79□□□□□ -1.8
TY1A-MR1Q04215 RPL23AYBL087C 414 nt3.79□□□□□ -1.8
TY1A-MR1Q04215 YPK1YKL126W 2043 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 RBK1YCR036W 1002 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 tQ(UUG)CtQ(UUG)C 72 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 tQ(UUG)D1tQ(UUG)D1 72 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 tQ(UUG)D2tQ(UUG)D2 72 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 tQ(UUG)D3tQ(UUG)D3 72 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 tQ(UUG)E1tQ(UUG)E1 72 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 tQ(UUG)HtQ(UUG)H 72 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 tQ(UUG)LtQ(UUG)L 72 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 YIL165CYIL165C 360 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 FAS2YPL231W 5664 nt3.78□□□□□ -1.8
TY1A-MR1Q04215 TCP1YDR212W 1680 nt3.78□□□□□ -1.81
TY1A-MR1Q04215 ARK1YNL020C 1917 nt3.78□□□□□ -1.81
TY1A-MR1Q04215 SRP72YPL210C 1923 nt3.78□□□□□ -1.81
TY1A-MR1Q04215 CWH43YCR017C 2862 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 PTA1YAL043C 2358 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 RAD1YPL022W 3303 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 TRZ1YKR079C 2517 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 YCF1YDR135C 4548 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 YIL059CYIL059C 366 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 PIG1YLR273C 1947 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 YRM1YOR172W 2361 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 APC2YLR127C 2562 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 MPS1YDL028C 2295 nt3.77□□□□□ -1.81
TY1A-MR1Q04215 FAA2YER015W 2235 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 ALO1YML086C 1581 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 PDR5YOR153W 4536 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 VPS54YDR027C 2670 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 YJL022WYJL022W 309 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 BRE4YDL231C 3378 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 MUK1YPL070W 1839 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 SSQ1YLR369W 1974 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 YOL057WYOL057W 2136 nt3.76□□□□□ -1.81
TY1A-MR1Q04215 VHS3YOR054C 2025 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 IOC3YFR013W 2364 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 ULS1YOR191W 4860 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 ERP6YGL002W 651 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 EMP24YGL200C 612 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 YBR099CYBR099C 384 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 VID28YIL017C 2766 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 ISM1YPL040C 3009 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 ROD1YOR018W 2514 nt3.75□□□□□ -1.81
TY1A-MR1Q04215 YDR286CYDR286C 345 nt3.74□□□□□ -1.81
TY1A-MR1Q04215 KEL2YGR238C 2649 nt3.74□□□□□ -1.81
TY1A-MR1Q04215 RPL6AYML073C 531 nt3.74□□□□□ -1.81
TY1A-MR1Q04215 ASC1YMR116C 960 nt3.74□□□□□ -1.81
TY1A-MR1Q04215 GAL11YOL051W 3246 nt3.74□□□□□ -1.81
TY1A-MR1Q04215 IMH1YLR309C 2736 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 BRP1YGL007W 378 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 YIL058WYIL058W 285 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 YML007C-AYML007C-A 111 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 GIS2YNL255C 462 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 RPL33BYOR234C 324 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 YBR121C-AYBR121C-A 159 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms