Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 NDD1YOR372C 1665 nt3.4□□□□□ -1.86
NPL3Q01560 SNX41YDR425W 1878 nt3.4□□□□□ -1.87
NPL3Q01560 tW(UCA)QtW(UCA)Q 74 nt3.4□□□□□ -1.87
NPL3Q01560 ESF2YNR054C 951 nt3.4□□□□□ -1.87
NPL3Q01560 TIR2YOR010C 756 nt3.4□□□□□ -1.87
NPL3Q01560 ECM5YMR176W 4236 nt3.4□□□□□ -1.87
NPL3Q01560 RIX1YHR197W 2292 nt3.4□□□□□ -1.87
NPL3Q01560 YNL034WYNL034W 1839 nt3.4□□□□□ -1.87
NPL3Q01560 MET10YFR030W 3108 nt3.39□□□□□ -1.87
NPL3Q01560 TOM70YNL121C 1854 nt3.39□□□□□ -1.87
NPL3Q01560 YCK3YER123W 1575 nt3.39□□□□□ -1.87
NPL3Q01560 RPS17BYDR447C 411 nt3.39□□□□□ -1.87 RIP-Chip
NPL3Q01560 HPA3YEL066W 540 nt3.39□□□□□ -1.87 RIP-Chip
NPL3Q01560 YER079C-AYER079C-A 339 nt3.39□□□□□ -1.87
NPL3Q01560 YMR31YFR049W 372 nt3.39□□□□□ -1.87 RIP-Chip
NPL3Q01560 YGL188C-AYGL188C-A 141 nt3.39□□□□□ -1.87 RIP-Chip
NPL3Q01560 PFD1YJL179W 330 nt3.39□□□□□ -1.87 RIP-Chip
NPL3Q01560 YJL202CYJL202C 348 nt3.39□□□□□ -1.87
NPL3Q01560 RPS8AYBL072C 603 nt3.39□□□□□ -1.87
NPL3Q01560 SMC2YFR031C 3513 nt3.39□□□□□ -1.87
NPL3Q01560 BMS1YPL217C 3552 nt3.39□□□□□ -1.87
NPL3Q01560 POM152YMR129W 4014 nt3.39□□□□□ -1.87
NPL3Q01560 YDL242WYDL242W 354 nt3.38□□□□□ -1.87
NPL3Q01560 GPI8YDR331W 1236 nt3.38□□□□□ -1.87
NPL3Q01560 ISD11YER048W-A 285 nt3.38□□□□□ -1.87 RIP-Chip
NPL3Q01560 tT(UGU)Q1tT(UGU)Q1 76 nt3.38□□□□□ -1.87
NPL3Q01560 YIL058WYIL058W 285 nt3.38□□□□□ -1.87
NPL3Q01560 TIM8YJR135W-A 264 nt3.38□□□□□ -1.87 RIP-Chip
NPL3Q01560 YMR307C-AYMR307C-A 195 nt3.38□□□□□ -1.87
NPL3Q01560 MSR1YHR091C 1932 nt3.38□□□□□ -1.87
NPL3Q01560 SMC3YJL074C 3693 nt3.37□□□□□ -1.87
NPL3Q01560 MRP8YKL142W 660 nt3.37□□□□□ -1.87 RIP-Chip
NPL3Q01560 AKR1YDR264C 2295 nt3.37□□□□□ -1.87
NPL3Q01560 STE23YLR389C 3084 nt3.37□□□□□ -1.87
NPL3Q01560 CDC36YDL165W 576 nt3.36□□□□□ -1.87
NPL3Q01560 FAP7YDL166C 594 nt3.36□□□□□ -1.87
NPL3Q01560 YJL182CYJL182C 318 nt3.36□□□□□ -1.87
NPL3Q01560 SHH3YMR118C 591 nt3.36□□□□□ -1.87
NPL3Q01560 YPR108W-AYPR108W-A 213 nt3.36□□□□□ -1.87
NPL3Q01560 SPB1YCL054W 2526 nt3.36□□□□□ -1.87
NPL3Q01560 NOT5YPR072W 1683 nt3.36□□□□□ -1.87
NPL3Q01560 YDR183C-AYDR183C-A 258 nt3.35□□□□□ -1.87
NPL3Q01560 MSL1YIR009W 336 nt3.35□□□□□ -1.87 RIP-Chip
NPL3Q01560 YLR466C-BYLR466C-B 117 nt3.35□□□□□ -1.87
NPL3Q01560 SMA2YML066C 1110 nt3.35□□□□□ -1.87
NPL3Q01560 TLC1TLC1 1301 nt3.35□□□□□ -1.87
NPL3Q01560 RLF2YPR018W 1821 nt3.35□□□□□ -1.87
NPL3Q01560 FLO5YHR211W 3228 nt3.34□□□□□ -1.87
NPL3Q01560 ENA5YDR038C 3276 nt3.34□□□□□ -1.87
NPL3Q01560 ENA2YDR039C 3276 nt3.34□□□□□ -1.87
NPL3Q01560 ENA1YDR040C 3276 nt3.34□□□□□ -1.87
NPL3Q01560 YRB1YDR002W 606 nt3.34□□□□□ -1.87
NPL3Q01560 CAJ1YER048C 1176 nt3.34□□□□□ -1.87
NPL3Q01560 YGR151CYGR151C 336 nt3.34□□□□□ -1.87
NPL3Q01560 YHR214C-EYHR214C-E 300 nt3.34□□□□□ -1.87
NPL3Q01560 YAR070CYAR070C 300 nt3.34□□□□□ -1.87
NPL3Q01560 snR51snR51 107 nt3.34□□□□□ -1.87
NPL3Q01560 AI2Q0055 2565 nt3.34□□□□□ -1.88
NPL3Q01560 IRC10YOL015W 1761 nt3.33□□□□□ -1.88
NPL3Q01560 TAF1YGR274C 3201 nt3.33□□□□□ -1.88
NPL3Q01560 BAT1YHR208W 1182 nt3.33□□□□□ -1.88
NPL3Q01560 HYR1YIR037W 492 nt3.33□□□□□ -1.88 RIP-Chip
NPL3Q01560 YMR122W-AYMR122W-A 255 nt3.33□□□□□ -1.88 RIP-Chip
NPL3Q01560 PGA1YNL158W 597 nt3.33□□□□□ -1.88 RIP-Chip
NPL3Q01560 YNL205CYNL205C 423 nt3.33□□□□□ -1.88
NPL3Q01560 BNA4YBL098W 1383 nt3.33□□□□□ -1.88
NPL3Q01560 MET5YJR137C 4329 nt3.33□□□□□ -1.88
NPL3Q01560 APC2YLR127C 2562 nt3.33□□□□□ -1.88
NPL3Q01560 YJL016WYJL016W 1686 nt3.33□□□□□ -1.88
NPL3Q01560 YFL063WYFL063W 456 nt3.32□□□□□ -1.88
NPL3Q01560 URM1YIL008W 300 nt3.32□□□□□ -1.88 RIP-Chip
NPL3Q01560 PRE8YML092C 753 nt3.32□□□□□ -1.88
NPL3Q01560 YOR170WYOR170W 306 nt3.32□□□□□ -1.88
NPL3Q01560 YPL238CYPL238C 390 nt3.32□□□□□ -1.88
NPL3Q01560 YOL057WYOL057W 2136 nt3.32□□□□□ -1.88
NPL3Q01560 NTO1YPR031W 2247 nt3.32□□□□□ -1.88
NPL3Q01560 FLO9YAL063C 3969 nt3.31□□□□□ -1.88
NPL3Q01560 YIL166CYIL166C 1629 nt3.31□□□□□ -1.88
NPL3Q01560 HMF1YER057C 390 nt3.31□□□□□ -1.88 RIP-Chip
NPL3Q01560 RPL8BYLL045C 771 nt3.31□□□□□ -1.88
NPL3Q01560 SQS1YNL224C 2304 nt3.31□□□□□ -1.88
NPL3Q01560 USE1YGL098W 738 nt3.3□□□□□ -1.88
NPL3Q01560 YPK1YKL126W 2043 nt3.3□□□□□ -1.88
NPL3Q01560 ECM25YJL201W 1800 nt3.3□□□□□ -1.88 RIP-Chip
NPL3Q01560 BRO1YPL084W 2535 nt3.3□□□□□ -1.88
NPL3Q01560 COX1Q0045 1605 nt3.3□□□□□ -1.88
NPL3Q01560 SHQ1YIL104C 1524 nt3.29□□□□□ -1.88
NPL3Q01560 TPS2YDR074W 2691 nt3.29□□□□□ -1.88
NPL3Q01560 YBP1YBR216C 2025 nt3.29□□□□□ -1.88
NPL3Q01560 TRM2YKR056W 1920 nt3.29□□□□□ -1.88
NPL3Q01560 YDL007C-AYDL007C-A 258 nt3.29□□□□□ -1.88
NPL3Q01560 YER189WYER189W 369 nt3.29□□□□□ -1.88 RIP-Chip
NPL3Q01560 YAL064W-BYAL064W-B 381 nt3.29□□□□□ -1.88
NPL3Q01560 LCL2YLR104W 396 nt3.29□□□□□ -1.88 RIP-Chip
NPL3Q01560 EGD1YPL037C 474 nt3.29□□□□□ -1.88
NPL3Q01560 YCL023CYCL023C 348 nt3.29□□□□□ -1.88
NPL3Q01560 PSK2YOL045W 3306 nt3.29□□□□□ -1.88
NPL3Q01560 PAC1YOR269W 1485 nt3.28□□□□□ -1.88
NPL3Q01560 GYP7YDL234C 2241 nt3.28□□□□□ -1.88
NPL3Q01560 SSE1YPL106C 2082 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms