Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 PRM8YGL053W 714 nt2.43□□□□□ -2.02
RPA49Q01080 LAG1YHL003C 1236 nt2.43□□□□□ -2.02
RPA49Q01080 CIC1YHR052W 1131 nt2.43□□□□□ -2.02
RPA49Q01080 GIC1YHR061C 945 nt2.43□□□□□ -2.02
RPA49Q01080 YJR023CYJR023C 402 nt2.43□□□□□ -2.02
RPA49Q01080 TMA10YLR327C 261 nt2.43□□□□□ -2.02
RPA49Q01080 TOA1YOR194C 861 nt2.43□□□□□ -2.02
RPA49Q01080 HSC82YMR186W 2118 nt2.42□□□□□ -2.02
RPA49Q01080 MLH1YMR167W 2310 nt2.42□□□□□ -2.02
RPA49Q01080 INP53YOR109W 3324 nt2.42□□□□□ -2.02
RPA49Q01080 IRC4YDR540C 540 nt2.42□□□□□ -2.02
RPA49Q01080 YIL058WYIL058W 285 nt2.42□□□□□ -2.02
RPA49Q01080 VPS51YKR020W 495 nt2.42□□□□□ -2.02
RPA49Q01080 YHC1YLR298C 696 nt2.42□□□□□ -2.02
RPA49Q01080 PHO80YOL001W 882 nt2.42□□□□□ -2.02
RPA49Q01080 ACM1YPL267W 630 nt2.42□□□□□ -2.02
RPA49Q01080 INP51YIL002C 2841 nt2.42□□□□□ -2.02
RPA49Q01080 INO80YGL150C 4470 nt2.42□□□□□ -2.02
RPA49Q01080 VPS16YPL045W 2397 nt2.42□□□□□ -2.02
RPA49Q01080 ORC2YBR060C 1863 nt2.41□□□□□ -2.02
RPA49Q01080 SGM1YJR134C 2124 nt2.41□□□□□ -2.02
RPA49Q01080 CRD1YDL142C 852 nt2.41□□□□□ -2.02
RPA49Q01080 ACB1YGR037C 264 nt2.41□□□□□ -2.02
RPA49Q01080 SPC1YJR010C-A 285 nt2.41□□□□□ -2.02
RPA49Q01080 YBL005W-BYBL005W-B 5268 nt2.4□□□□□ -2.02
RPA49Q01080 YDR199WYDR199W 366 nt2.4□□□□□ -2.03
RPA49Q01080 HYP2YEL034W 474 nt2.4□□□□□ -2.03
RPA49Q01080 HYR1YIR037W 492 nt2.4□□□□□ -2.03
RPA49Q01080 EAF6YJR082C 342 nt2.4□□□□□ -2.03
RPA49Q01080 RPL37AYLR185W 267 nt2.4□□□□□ -2.03
RPA49Q01080 ROY1YMR258C 1662 nt2.4□□□□□ -2.03
RPA49Q01080 SEC16YPL085W 6588 nt2.4□□□□□ -2.03
RPA49Q01080 SPF1YEL031W 3648 nt2.4□□□□□ -2.03
RPA49Q01080 RGA2YDR379W 3030 nt2.39□□□□□ -2.03
RPA49Q01080 RRP12YPL012W 3687 nt2.39□□□□□ -2.03
RPA49Q01080 DPB11YJL090C 2295 nt2.39□□□□□ -2.03
RPA49Q01080 SSD1YDR293C 3753 nt2.39□□□□□ -2.03
RPA49Q01080 YEL043WYEL043W 2871 nt2.39□□□□□ -2.03
RPA49Q01080 YER079C-AYER079C-A 339 nt2.39□□□□□ -2.03
RPA49Q01080 YGL165CYGL165C 579 nt2.39□□□□□ -2.03
RPA49Q01080 TIM10YHR005C-A 282 nt2.39□□□□□ -2.03
RPA49Q01080 AYR1YIL124W 894 nt2.39□□□□□ -2.03
RPA49Q01080 SVS1YPL163C 783 nt2.39□□□□□ -2.03
RPA49Q01080 TRS20YBR254C 528 nt2.39□□□□□ -2.03
RPA49Q01080 MGR1YCL044C 1254 nt2.39□□□□□ -2.03
RPA49Q01080 SIR3YLR442C 2937 nt2.39□□□□□ -2.03
RPA49Q01080 SSY1YDR160W 2559 nt2.39□□□□□ -2.03
RPA49Q01080 GIS1YDR096W 2685 nt2.38□□□□□ -2.03
RPA49Q01080 SDC1YDR469W 528 nt2.38□□□□□ -2.03
RPA49Q01080 TWF1YGR080W 999 nt2.38□□□□□ -2.03
RPA49Q01080 TPM2YIL138C 486 nt2.38□□□□□ -2.03
RPA49Q01080 RAM2YKL019W 951 nt2.38□□□□□ -2.03
RPA49Q01080 KTI11YBL071W-A 249 nt2.38□□□□□ -2.03
RPA49Q01080 KRE33YNL132W 3171 nt2.38□□□□□ -2.03
RPA49Q01080 ASG1YIL130W 2895 nt2.38□□□□□ -2.03
RPA49Q01080 UTP13YLR222C 2454 nt2.37□□□□□ -2.03
RPA49Q01080 CAJ1YER048C 1176 nt2.37□□□□□ -2.03
RPA49Q01080 PEP8YJL053W 1140 nt2.37□□□□□ -2.03
RPA49Q01080 YMR320WYMR320W 306 nt2.37□□□□□ -2.03
RPA49Q01080 YOL013W-BYOL013W-B 291 nt2.37□□□□□ -2.03
RPA49Q01080 CLN3YAL040C 1743 nt2.37□□□□□ -2.03
RPA49Q01080 TFC3YAL001C 3483 nt2.36□□□□□ -2.03
RPA49Q01080 MTC7YEL033W 420 nt2.36□□□□□ -2.03
RPA49Q01080 PEX4YGR133W 552 nt2.36□□□□□ -2.03
RPA49Q01080 YIL030W-AYIL030W-A 339 nt2.36□□□□□ -2.03
RPA49Q01080 CMS1YLR003C 876 nt2.36□□□□□ -2.03
RPA49Q01080 DGK1YOR311C 873 nt2.36□□□□□ -2.03
RPA49Q01080 DNF1YER166W 4716 nt2.35□□□□□ -2.03
RPA49Q01080 UTP22YGR090W 3714 nt2.35□□□□□ -2.03
RPA49Q01080 SNU56YDR240C 1479 nt2.35□□□□□ -2.03
RPA49Q01080 TRS130YMR218C 3309 nt2.35□□□□□ -2.03
RPA49Q01080 NUP100YKL068W 2880 nt2.35□□□□□ -2.03
RPA49Q01080 YFR056CYFR056C 369 nt2.35□□□□□ -2.03
RPA49Q01080 RNR4YGR180C 1038 nt2.35□□□□□ -2.03
RPA49Q01080 YBR277CYBR277C 402 nt2.35□□□□□ -2.03
RPA49Q01080 BRO1YPL084W 2535 nt2.35□□□□□ -2.03
RPA49Q01080 CBF2YGR140W 2871 nt2.35□□□□□ -2.03
RPA49Q01080 UBP11YKR098C 2154 nt2.34□□□□□ -2.03
RPA49Q01080 RGL1YPL066W 1440 nt2.34□□□□□ -2.03
RPA49Q01080 PTC5YOR090C 1719 nt2.34□□□□□ -2.03
RPA49Q01080 AHC2YCR082W 387 nt2.34□□□□□ -2.03
RPA49Q01080 FMP16YDR070C 282 nt2.34□□□□□ -2.03
RPA49Q01080 YDR220CYDR220C 294 nt2.34□□□□□ -2.03
RPA49Q01080 GCN4YEL009C 846 nt2.34□□□□□ -2.03
RPA49Q01080 YKL044WYKL044W 321 nt2.34□□□□□ -2.03
RPA49Q01080 URA10YMR271C 684 nt2.34□□□□□ -2.03
RPA49Q01080 RPB11YOL005C 363 nt2.34□□□□□ -2.03
RPA49Q01080 MDM32YOR147W 1869 nt2.34□□□□□ -2.03
RPA49Q01080 RRP6YOR001W 2202 nt2.34□□□□□ -2.04
RPA49Q01080 YIL080WYIL080W 4722 nt2.34□□□□□ -2.04
RPA49Q01080 YGL014C-AYGL014C-A 162 nt2.33□□□□□ -2.04
RPA49Q01080 YAL059C-AYAL059C-A 423 nt2.33□□□□□ -2.04
RPA49Q01080 LCL2YLR104W 396 nt2.33□□□□□ -2.04
RPA49Q01080 YLR458WYLR458W 381 nt2.33□□□□□ -2.04
RPA49Q01080 YMR194C-AYMR194C-A 225 nt2.33□□□□□ -2.04
RPA49Q01080 YOR105WYOR105W 327 nt2.33□□□□□ -2.04
RPA49Q01080 YPL068CYPL068C 882 nt2.33□□□□□ -2.04
RPA49Q01080 YPL197CYPL197C 414 nt2.33□□□□□ -2.04
RPA49Q01080 PHR1YOR386W 1698 nt2.33□□□□□ -2.04
RPA49Q01080 SNX41YDR425W 1878 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 119.1 ms