Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	ATX2	YOR079C	942 nt		1.54	□□□□□ -2.16
MRPS28	P21771	ARL1	YBR164C	552 nt		1.54	□□□□□ -2.16
MRPS28	P21771	HCS1	YKL017C	2052 nt		1.54	□□□□□ -2.16
MRPS28	P21771	YLR422W	YLR422W	5799 nt		1.53	□□□□□ -2.16
MRPS28	P21771	POL5	YEL055C	3069 nt		1.53	□□□□□ -2.16
MRPS28	P21771	MET18	YIL128W	3099 nt		1.53	□□□□□ -2.16
MRPS28	P21771	SHS1	YDL225W	1656 nt		1.53	□□□□□ -2.16
MRPS28	P21771	SSF2	YDR312W	1362 nt		1.53	□□□□□ -2.16
MRPS28	P21771	POL32	YJR043C	1053 nt		1.53	□□□□□ -2.16
MRPS28	P21771	SHE2	YKL130C	741 nt		1.53	□□□□□ -2.16
MRPS28	P21771	RPF2	YKR081C	1035 nt		1.53	□□□□□ -2.16
MRPS28	P21771	SLS1	YLR139C	1932 nt		1.52	□□□□□ -2.17
MRPS28	P21771	CHS1	YNL192W	3396 nt		1.52	□□□□□ -2.17
MRPS28	P21771	RPS26B	YER131W	360 nt		1.52	□□□□□ -2.17
MRPS28	P21771	GIM3	YNL153C	390 nt		1.52	□□□□□ -2.17
MRPS28	P21771	RXT2	YBR095C	1293 nt		1.52	□□□□□ -2.17
MRPS28	P21771	NIC96	YFR002W	2520 nt		1.52	□□□□□ -2.17
MRPS28	P21771	YNL034W	YNL034W	1839 nt		1.52	□□□□□ -2.17
MRPS28	P21771	ATG11	YPR049C	3537 nt		1.52	□□□□□ -2.17
MRPS28	P21771	YGR109W-B	YGR109W-B	4644 nt		1.51	□□□□□ -2.17
MRPS28	P21771	PET309	YLR067C	2898 nt		1.51	□□□□□ -2.17
MRPS28	P21771	NTF2	YER009W	378 nt		1.51	□□□□□ -2.17
MRPS28	P21771	VMA7	YGR020C	357 nt		1.51	□□□□□ -2.17
MRPS28	P21771	VPS35	YJL154C	2835 nt		1.5	□□□□□ -2.17
MRPS28	P21771	THG1	YGR024C	714 nt		1.5	□□□□□ -2.17
MRPS28	P21771	YIR021W-A	YIR021W-A	213 nt		1.5	□□□□□ -2.17
MRPS28	P21771	RPL37B	YDR500C	267 nt		1.49	□□□□□ -2.17
MRPS28	P21771	YGR242W	YGR242W	309 nt		1.49	□□□□□ -2.17
MRPS28	P21771	SNC1	YAL030W	354 nt		1.49	□□□□□ -2.17
MRPS28	P21771	GIM5	YML094W	492 nt		1.49	□□□□□ -2.17
MRPS28	P21771	RPS16A	YMR143W	432 nt		1.49	□□□□□ -2.17
MRPS28	P21771	YOR169C	YOR169C	465 nt		1.49	□□□□□ -2.17
MRPS28	P21771	YOR333C	YOR333C	417 nt		1.49	□□□□□ -2.17
MRPS28	P21771	ARL3	YPL051W	597 nt		1.49	□□□□□ -2.17
MRPS28	P21771	VID24	YBR105C	1089 nt		1.49	□□□□□ -2.17
MRPS28	P21771	SUS1	YBR111W-A	291 nt		1.49	□□□□□ -2.17
MRPS28	P21771	CDC37	YDR168W	1521 nt		1.49	□□□□□ -2.17
MRPS28	P21771	NAN1	YPL126W	2691 nt		1.48	□□□□□ -2.17
MRPS28	P21771	SOK2	YMR016C	2358 nt		1.48	□□□□□ -2.17
MRPS28	P21771	TUS1	YLR425W	3924 nt		1.48	□□□□□ -2.17
MRPS28	P21771	HKR1	YDR420W	5409 nt		1.48	□□□□□ -2.17
MRPS28	P21771	RSM28	YDR494W	1086 nt		1.48	□□□□□ -2.17
MRPS28	P21771	YJL147C	YJL147C	1149 nt		1.48	□□□□□ -2.17
MRPS28	P21771	YET1	YKL065C	621 nt		1.48	□□□□□ -2.17
MRPS28	P21771	GPN3	YLR243W	819 nt		1.48	□□□□□ -2.17
MRPS28	P21771	PAI3	YMR174C	207 nt		1.48	□□□□□ -2.17
MRPS28	P21771	SPR2	YOR214C	711 nt		1.48	□□□□□ -2.17
MRPS28	P21771	NSL1	YPL233W	651 nt		1.48	□□□□□ -2.17
MRPS28	P21771	ECM25	YJL201W	1800 nt		1.47	□□□□□ -2.17
MRPS28	P21771	AHC1	YOR023C	1701 nt		1.47	□□□□□ -2.17
MRPS28	P21771	YDR018C	YDR018C	1191 nt		1.47	□□□□□ -2.17
MRPS28	P21771	YDR537C	YDR537C	606 nt		1.47	□□□□□ -2.17
MRPS28	P21771	YFR056C	YFR056C	369 nt		1.47	□□□□□ -2.17
MRPS28	P21771	CWC23	YGL128C	852 nt		1.47	□□□□□ -2.17
MRPS28	P21771	PRS3	YHL011C	963 nt		1.47	□□□□□ -2.17
MRPS28	P21771	SMD3	YLR147C	306 nt		1.47	□□□□□ -2.17
MRPS28	P21771	SPC2	YML055W	537 nt		1.47	□□□□□ -2.17
MRPS28	P21771	RIO2	YNL207W	1278 nt		1.47	□□□□□ -2.17
MRPS28	P21771	YOL106W	YOL106W	354 nt		1.47	□□□□□ -2.17
MRPS28	P21771	YOL150C	YOL150C	312 nt		1.47	□□□□□ -2.17
MRPS28	P21771	YDR341C	YDR341C	1824 nt		1.47	□□□□□ -2.17
MRPS28	P21771	MON2	YNL297C	4911 nt		1.46	□□□□□ -2.18
MRPS28	P21771	GUP1	YGL084C	1683 nt		1.46	□□□□□ -2.18
MRPS28	P21771	GPI8	YDR331W	1236 nt		1.46	□□□□□ -2.18
MRPS28	P21771	YER158W-A	YER158W-A	216 nt		1.46	□□□□□ -2.18
MRPS28	P21771	TPM2	YIL138C	486 nt		1.46	□□□□□ -2.18
MRPS28	P21771	SDL1	YIL167W	633 nt		1.46	□□□□□ -2.18
MRPS28	P21771	PBY1	YBR094W	2262 nt		1.46	□□□□□ -2.18
MRPS28	P21771	LOC1	YFR001W	615 nt		1.45	□□□□□ -2.18
MRPS28	P21771	YAL064W	YAL064W	285 nt		1.45	□□□□□ -2.18
MRPS28	P21771	YLR053C	YLR053C	327 nt		1.45	□□□□□ -2.18
MRPS28	P21771	ATG38	YLR211C	681 nt		1.45	□□□□□ -2.18
MRPS28	P21771	TOA1	YOR194C	861 nt		1.45	□□□□□ -2.18
MRPS28	P21771	ARP7	YPR034W	1434 nt		1.45	□□□□□ -2.18
MRPS28	P21771	SSK2	YNR031C	4740 nt		1.45	□□□□□ -2.18
MRPS28	P21771	UBP11	YKR098C	2154 nt		1.45	□□□□□ -2.18
MRPS28	P21771	MNE1	YOR350C	1992 nt		1.45	□□□□□ -2.18
MRPS28	P21771	CDC53	YDL132W	2448 nt		1.44	□□□□□ -2.18
MRPS28	P21771	FMP16	YDR070C	282 nt		1.44	□□□□□ -2.18
MRPS28	P21771	YFR057W	YFR057W	456 nt		1.44	□□□□□ -2.18
MRPS28	P21771	HOP2	YGL033W	657 nt		1.44	□□□□□ -2.18
MRPS28	P21771	YHR050W-A	YHR050W-A	171 nt		1.44	□□□□□ -2.18
MRPS28	P21771	COX3	Q0275	810 nt		1.44	□□□□□ -2.18
MRPS28	P21771	HYR1	YIR037W	492 nt		1.44	□□□□□ -2.18
MRPS28	P21771	YJL086C	YJL086C	369 nt		1.44	□□□□□ -2.18
MRPS28	P21771	SRP21	YKL122C	504 nt		1.44	□□□□□ -2.18
MRPS28	P21771	VPS63	YLR261C	327 nt		1.44	□□□□□ -2.18
MRPS28	P21771	LSM7	YNL147W	348 nt		1.44	□□□□□ -2.18
MRPS28	P21771	YNL179C	YNL179C	438 nt		1.44	□□□□□ -2.18
MRPS28	P21771	YPL119C-A	YPL119C-A	264 nt		1.44	□□□□□ -2.18
MRPS28	P21771	TRS20	YBR254C	528 nt		1.44	□□□□□ -2.18
MRPS28	P21771	SAG1	YJR004C	1953 nt		1.44	□□□□□ -2.18
MRPS28	P21771	TFC8	YPL007C	1767 nt		1.44	□□□□□ -2.18
MRPS28	P21771	SYH1	YPL105C	2550 nt		1.44	□□□□□ -2.18
MRPS28	P21771	15S_rRNA	15S_rRNA	1649 nt		1.44	□□□□□ -2.18
MRPS28	P21771	NCS2	YNL119W	1482 nt		1.43	□□□□□ -2.18
MRPS28	P21771	PIK1	YNL267W	3201 nt		1.43	□□□□□ -2.18
MRPS28	P21771	CDC50	YCR094W	1176 nt		1.43	□□□□□ -2.18
MRPS28	P21771	YDR248C	YDR248C	582 nt		1.43	□□□□□ -2.18
MRPS28	P21771	RSM27	YGR215W	333 nt		1.43	□□□□□ -2.18

Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms