Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 STD1YOR047C 1335 nt1.87□□□□□ -2.11
RAD3P06839 HSH155YMR288W 2916 nt1.87□□□□□ -2.11
RAD3P06839 ASG1YIL130W 2895 nt1.86□□□□□ -2.11
RAD3P06839 UBC5YDR059C 447 nt1.86□□□□□ -2.11
RAD3P06839 YDR199WYDR199W 366 nt1.86□□□□□ -2.11
RAD3P06839 RSM28YDR494W 1086 nt1.86□□□□□ -2.11
RAD3P06839 YLR307C-AYLR307C-A 264 nt1.86□□□□□ -2.11
RAD3P06839 SWM2YNR004W 441 nt1.86□□□□□ -2.11
RAD3P06839 YLR422WYLR422W 5799 nt1.86□□□□□ -2.11
RAD3P06839 IRC20YLR247C 4671 nt1.86□□□□□ -2.11
RAD3P06839 YDR261W-AYDR261W-A 1317 nt1.86□□□□□ -2.11
RAD3P06839 TUS1YLR425W 3924 nt1.85□□□□□ -2.11
RAD3P06839 IRC10YOL015W 1761 nt1.85□□□□□ -2.11
RAD3P06839 YNL034WYNL034W 1839 nt1.85□□□□□ -2.11
RAD3P06839 FMP16YDR070C 282 nt1.85□□□□□ -2.11
RAD3P06839 YHR050W-AYHR050W-A 171 nt1.85□□□□□ -2.11
RAD3P06839 YLR217WYLR217W 324 nt1.85□□□□□ -2.11
RAD3P06839 TMA7YLR262C-A 195 nt1.85□□□□□ -2.11
RAD3P06839 BRX1YOL077C 876 nt1.85□□□□□ -2.11
RAD3P06839 ATX2YOR079C 942 nt1.85□□□□□ -2.11
RAD3P06839 VPS38YLR360W 1320 nt1.85□□□□□ -2.11
RAD3P06839 UBP11YKR098C 2154 nt1.84□□□□□ -2.11
RAD3P06839 NCB2YDR397C 441 nt1.84□□□□□ -2.11
RAD3P06839 NTF2YER009W 378 nt1.84□□□□□ -2.11
RAD3P06839 YGL165CYGL165C 579 nt1.84□□□□□ -2.11
RAD3P06839 YKR075W-AYKR075W-A 270 nt1.84□□□□□ -2.11
RAD3P06839 YLR302CYLR302C 363 nt1.84□□□□□ -2.11
RAD3P06839 PAI3YMR174C 207 nt1.84□□□□□ -2.11
RAD3P06839 FYV12YOR183W 390 nt1.84□□□□□ -2.11
RAD3P06839 NSL1YPL233W 651 nt1.84□□□□□ -2.11
RAD3P06839 SUS1YBR111W-A 291 nt1.84□□□□□ -2.11
RAD3P06839 MGA2YIR033W 3342 nt1.84□□□□□ -2.12
RAD3P06839 IRC4YDR540C 540 nt1.83□□□□□ -2.12
RAD3P06839 LOC1YFR001W 615 nt1.83□□□□□ -2.12
RAD3P06839 tR(UCU)Q1tR(UCU)Q1 73 nt1.83□□□□□ -2.12
RAD3P06839 RLP24YLR009W 600 nt1.83□□□□□ -2.12
RAD3P06839 YNL226WYNL226W 411 nt1.83□□□□□ -2.12
RAD3P06839 TOA1YOR194C 861 nt1.83□□□□□ -2.12
RAD3P06839 YOR333CYOR333C 417 nt1.83□□□□□ -2.12
RAD3P06839 REV1YOR346W 2958 nt1.83□□□□□ -2.12
RAD3P06839 GRX5YPL059W 453 nt1.83□□□□□ -2.12
RAD3P06839 BRR2YER172C 6492 nt1.83□□□□□ -2.12
RAD3P06839 CAT2YML042W 2013 nt1.83□□□□□ -2.12
RAD3P06839 LEU3YLR451W 2661 nt1.83□□□□□ -2.12
RAD3P06839 YER068C-AYER068C-A 432 nt1.82□□□□□ -2.12
RAD3P06839 YJL047C-AYJL047C-A 135 nt1.82□□□□□ -2.12
RAD3P06839 ADF1YCL058W-A 342 nt1.82□□□□□ -2.12
RAD3P06839 CDC53YDL132W 2448 nt1.82□□□□□ -2.12
RAD3P06839 CFT2YLR115W 2580 nt1.82□□□□□ -2.12
RAD3P06839 MNE1YOR350C 1992 nt1.81□□□□□ -2.12
RAD3P06839 PTC5YOR090C 1719 nt1.81□□□□□ -2.12
RAD3P06839 HER1YOR227W 3741 nt1.81□□□□□ -2.12
RAD3P06839 YDR248CYDR248C 582 nt1.81□□□□□ -2.12
RAD3P06839 SYM1YLR251W 594 nt1.81□□□□□ -2.12
RAD3P06839 RPS16AYMR143W 432 nt1.81□□□□□ -2.12
RAD3P06839 YNL050CYNL050C 813 nt1.81□□□□□ -2.12
RAD3P06839 ARL3YPL051W 597 nt1.81□□□□□ -2.12
RAD3P06839 PEP1YBL017C 4740 nt1.81□□□□□ -2.12
RAD3P06839 15S_rRNA15S_rRNA 1649 nt1.8□□□□□ -2.12
RAD3P06839 RKM1YPL208W 1752 nt1.8□□□□□ -2.12
RAD3P06839 YDR018CYDR018C 1191 nt1.8□□□□□ -2.12
RAD3P06839 YGR242WYGR242W 309 nt1.8□□□□□ -2.12
RAD3P06839 COX3Q0275 810 nt1.8□□□□□ -2.12
RAD3P06839 IPP1YBR011C 864 nt1.8□□□□□ -2.12
RAD3P06839 YPL119C-AYPL119C-A 264 nt1.8□□□□□ -2.12
RAD3P06839 YBR174CYBR174C 315 nt1.8□□□□□ -2.12
RAD3P06839 SLM1YIL105C 2061 nt1.79□□□□□ -2.12
RAD3P06839 AHC2YCR082W 387 nt1.79□□□□□ -2.12
RAD3P06839 SEC28YIL076W 891 nt1.79□□□□□ -2.12
RAD3P06839 MSL1YIR009W 336 nt1.79□□□□□ -2.12
RAD3P06839 YIR020C-BYIR020C-B 735 nt1.79□□□□□ -2.12
RAD3P06839 YML084WYML084W 309 nt1.79□□□□□ -2.12
RAD3P06839 YOL150CYOL150C 312 nt1.79□□□□□ -2.12
RAD3P06839 YOR169CYOR169C 465 nt1.79□□□□□ -2.12
RAD3P06839 YBR287WYBR287W 1284 nt1.79□□□□□ -2.12
RAD3P06839 YNL144CYNL144C 2223 nt1.79□□□□□ -2.12
RAD3P06839 LYS9YNR050C 1341 nt1.78□□□□□ -2.12
RAD3P06839 YDL163WYDL163W 303 nt1.78□□□□□ -2.12
RAD3P06839 YDR115WYDR115W 318 nt1.78□□□□□ -2.12
RAD3P06839 LIN1YHR156C 1023 nt1.78□□□□□ -2.12
RAD3P06839 SDL1YIL167W 633 nt1.78□□□□□ -2.12
RAD3P06839 YJL133C-AYJL133C-A 225 nt1.78□□□□□ -2.12
RAD3P06839 YJL147CYJL147C 1149 nt1.78□□□□□ -2.12
RAD3P06839 SNC1YAL030W 354 nt1.78□□□□□ -2.12
RAD3P06839 YLR053CYLR053C 327 nt1.78□□□□□ -2.12
RAD3P06839 VPS63YLR261C 327 nt1.78□□□□□ -2.12
RAD3P06839 RIO2YNL207W 1278 nt1.78□□□□□ -2.12
RAD3P06839 YNL235CYNL235C 432 nt1.78□□□□□ -2.12
RAD3P06839 YBR063CYBR063C 1215 nt1.78□□□□□ -2.12
RAD3P06839 POP7YBR167C 423 nt1.78□□□□□ -2.12
RAD3P06839 PMD1YER132C 5262 nt1.77□□□□□ -2.13
RAD3P06839 Q0255Q0255 1419 nt1.77□□□□□ -2.13
RAD3P06839 CDC50YCR094W 1176 nt1.77□□□□□ -2.13
RAD3P06839 RPL37BYDR500C 267 nt1.77□□□□□ -2.13
RAD3P06839 YIP1YGR172C 747 nt1.77□□□□□ -2.13
RAD3P06839 SPO11YHL022C 1197 nt1.77□□□□□ -2.13
RAD3P06839 SRP21YKL122C 504 nt1.77□□□□□ -2.13
RAD3P06839 URA5YML106W 681 nt1.77□□□□□ -2.13
RAD3P06839 HCS1YKL017C 2052 nt1.77□□□□□ -2.13
RAD3P06839 SBE22YHR103W 2559 nt1.76□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 96.8 ms