Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
UPK1BO75841 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
UPK1BO75841 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UPK1BO75841 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UPK1BO75841 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1BO75841 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPK1BO75841 AL032819.2-201ENST00000624543 2162 ntBASIC17.87■□□□□ 0.45
UPK1BO75841 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
UPK1BO75841 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.87■□□□□ 0.45
UPK1BO75841 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1BO75841 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 MIR4281-201ENST00000580852 62 ntBASIC17.87■□□□□ 0.45
UPK1BO75841 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
UPK1BO75841 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
UPK1BO75841 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UPK1BO75841 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1BO75841 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPK1BO75841 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
UPK1BO75841 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
UPK1BO75841 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1BO75841 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK1BO75841 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.86■□□□□ 0.45
UPK1BO75841 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK1BO75841 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK1BO75841 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UPK1BO75841 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK1BO75841 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
UPK1BO75841 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1BO75841 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK1BO75841 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.85■□□□□ 0.45
UPK1BO75841 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.85■□□□□ 0.45
UPK1BO75841 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.85■□□□□ 0.45
UPK1BO75841 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
UPK1BO75841 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK1BO75841 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.85■□□□□ 0.45
UPK1BO75841 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK1BO75841 SNX5-217ENST00000606557 1087 ntBASIC17.85■□□□□ 0.45
UPK1BO75841 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1BO75841 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
UPK1BO75841 PCDHB18P-201ENST00000524813 2368 ntBASIC17.84■□□□□ 0.45
UPK1BO75841 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.84■□□□□ 0.45
UPK1BO75841 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
UPK1BO75841 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
UPK1BO75841 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.84■□□□□ 0.45
UPK1BO75841 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.84■□□□□ 0.45
UPK1BO75841 AC092720.2-201ENST00000602388 1665 ntBASIC17.84■□□□□ 0.45
UPK1BO75841 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UPK1BO75841 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UPK1BO75841 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1BO75841 THA1P-201ENST00000590384 1145 ntBASIC17.84■□□□□ 0.45
UPK1BO75841 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UPK1BO75841 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1BO75841 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1BO75841 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
UPK1BO75841 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
UPK1BO75841 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1BO75841 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.83■□□□□ 0.45
UPK1BO75841 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
UPK1BO75841 AC120498.9-201ENST00000339021 3867 ntBASIC17.83■□□□□ 0.45
UPK1BO75841 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.83■□□□□ 0.45
UPK1BO75841 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
UPK1BO75841 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1BO75841 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1BO75841 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1BO75841 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms