Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 RPS24AYER074W 408 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 YGL041CYGL041C 204 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 RPL14BYHL001W 417 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 YIL058WYIL058W 285 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 PAM16YJL104W 450 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 YOR008C-AYOR008C-A 225 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 snR42snR42 351 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 YPR003CYPR003C 2265 nt3.59□□□□□ -1.84
TY1A-PR3Q6Q5H1 NPR1YNL183C 2373 nt3.59□□□□□ -1.84
TY1A-PR3Q6Q5H1 SWH1YAR042W 3567 nt3.58□□□□□ -1.84
TY1A-PR3Q6Q5H1 YHL006W-AYHL006W-A 354 nt3.58□□□□□ -1.84
TY1A-PR3Q6Q5H1 TFB1YDR311W 1929 nt3.58□□□□□ -1.84
TY1A-PR3Q6Q5H1 ECM5YMR176W 4236 nt3.58□□□□□ -1.84
TY1A-PR3Q6Q5H1 FOX2YKR009C 2703 nt3.57□□□□□ -1.84
TY1A-PR3Q6Q5H1 NCR1YPL006W 3513 nt3.57□□□□□ -1.84
TY1A-PR3Q6Q5H1 BRE4YDL231C 3378 nt3.57□□□□□ -1.84
TY1A-PR3Q6Q5H1 AIM9YER080W 1884 nt3.57□□□□□ -1.84
TY1A-PR3Q6Q5H1 ALG13YGL047W 609 nt3.57□□□□□ -1.84
TY1A-PR3Q6Q5H1 BNI4YNL233W 2679 nt3.57□□□□□ -1.84
TY1A-PR3Q6Q5H1 RPO31YOR116C 4383 nt3.57□□□□□ -1.84
TY1A-PR3Q6Q5H1 HCS1YKL017C 2052 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 VPS52YDR484W 1926 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 YNL034WYNL034W 1839 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 REG1YDR028C 3045 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 YDL041WYDL041W 354 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 YEL020C-BYEL020C-B 198 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 HPA3YEL066W 540 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 COX18YGR062C 951 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 tQ(UUG)CtQ(UUG)C 72 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 tQ(UUG)D1tQ(UUG)D1 72 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 tQ(UUG)D2tQ(UUG)D2 72 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 tQ(UUG)D3tQ(UUG)D3 72 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 tQ(UUG)E1tQ(UUG)E1 72 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 tQ(UUG)HtQ(UUG)H 72 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 tQ(UUG)LtQ(UUG)L 72 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 RPA34YJL148W 702 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 GON7YJL184W 372 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 NCE101YJL205C 162 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 HTB2YBL002W 396 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 RPS18BYML026C 441 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 MCD1YDL003W 1701 nt3.56□□□□□ -1.84
TY1A-PR3Q6Q5H1 MCM7YBR202W 2538 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 NUP82YJL061W 2142 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 APC11YDL008W 498 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 YJL020W-AYJL020W-A 258 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 YAL059C-AYAL059C-A 423 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 YOR318CYOR318C 306 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 SSO1YPL232W 873 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 snR191snR191 274 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 YRM1YOR172W 2361 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 ETP1YHL010C 1758 nt3.55□□□□□ -1.84
TY1A-PR3Q6Q5H1 YPK1YKL126W 2043 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 ERB1YMR049C 2424 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 PHO81YGR233C 3537 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 YDL062WYDL062W 426 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 YDR048CYDR048C 315 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 CSN9YDR179C 489 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 COX23YHR116W 456 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 LCL2YLR104W 396 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 YOR011W-AYOR011W-A 207 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 MF(ALPHA)1YPL187W 498 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 SWD3YBR175W 948 nt3.54□□□□□ -1.84
TY1A-PR3Q6Q5H1 MSH2YOL090W 2895 nt3.53□□□□□ -1.84
TY1A-PR3Q6Q5H1 RAD61YDR014W 1944 nt3.53□□□□□ -1.84
TY1A-PR3Q6Q5H1 YMR230W-AYMR230W-A 189 nt3.53□□□□□ -1.84
TY1A-PR3Q6Q5H1 YOR170WYOR170W 306 nt3.53□□□□□ -1.84
TY1A-PR3Q6Q5H1 USA1YML029W 2517 nt3.53□□□□□ -1.84
TY1A-PR3Q6Q5H1 MTC4YBR255W 2085 nt3.53□□□□□ -1.84
TY1A-PR3Q6Q5H1 DBP6YNR038W 1890 nt3.52□□□□□ -1.85
TY1A-PR3Q6Q5H1 YIL102CYIL102C 306 nt3.52□□□□□ -1.85
TY1A-PR3Q6Q5H1 RPS7AYOR096W 573 nt3.52□□□□□ -1.85
TY1A-PR3Q6Q5H1 IES4YOR189W 351 nt3.52□□□□□ -1.85
TY1A-PR3Q6Q5H1 YBR137WYBR137W 540 nt3.52□□□□□ -1.85
TY1A-PR3Q6Q5H1 YDR034C-DYDR034C-D 5313 nt3.52□□□□□ -1.85
TY1A-PR3Q6Q5H1 APC1YNL172W 5247 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 GAD1YMR250W 1758 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 CWH43YCR017C 2862 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 snR79snR79 84 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 RPS17BYDR447C 411 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 CCW14YLR390W-A 717 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 ATP15YPL271W 189 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 YPR014CYPR014C 330 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 VBA4YDR119W 2307 nt3.51□□□□□ -1.85
TY1A-PR3Q6Q5H1 BRO1YPL084W 2535 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 FUS1YCL027W 1539 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 IOC2YLR095C 2439 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 YRB1YDR002W 606 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 YGR051CYGR051C 324 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 YHL042WYHL042W 453 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 YJR112W-AYJR112W-A 330 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 YML116W-AYML116W-A 303 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 TIM12YBR091C 330 nt3.5□□□□□ -1.85
TY1A-PR3Q6Q5H1 RNR1YER070W 2667 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 COG8YML071C 1824 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 RIM20YOR275C 1986 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 snR55snR55 98 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 YDR230WYDR230W 348 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 TIM13YGR181W 318 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 tS(AGA)D3tS(AGA)D3 83 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 YNL338WYNL338W 159 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms