Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 NCS2YNL119W 1482 nt1.97□□□□□ -2.09
RAD3P06839 PES4YFR023W 1836 nt1.97□□□□□ -2.09
RAD3P06839 NSE4YDL105W 1209 nt1.97□□□□□ -2.09
RAD3P06839 BTN2YGR142W 1233 nt1.97□□□□□ -2.09
RAD3P06839 tT(UGU)HtT(UGU)H 72 nt1.97□□□□□ -2.09
RAD3P06839 GPN3YLR243W 819 nt1.97□□□□□ -2.09
RAD3P06839 SMD2YLR275W 333 nt1.97□□□□□ -2.09
RAD3P06839 MES1YGR264C 2256 nt1.97□□□□□ -2.09
RAD3P06839 YER158W-AYER158W-A 216 nt1.96□□□□□ -2.1
RAD3P06839 YER172C-AYER172C-A 381 nt1.96□□□□□ -2.1
RAD3P06839 YAL066WYAL066W 309 nt1.96□□□□□ -2.1
RAD3P06839 YMR144WYMR144W 1029 nt1.96□□□□□ -2.1
RAD3P06839 DCP1YOL149W 696 nt1.96□□□□□ -2.1
RAD3P06839 SFG1YOR315W 1041 nt1.96□□□□□ -2.1
RAD3P06839 TRM7YBR061C 933 nt1.96□□□□□ -2.1
RAD3P06839 AME1YBR211C 975 nt1.96□□□□□ -2.1
RAD3P06839 SIR4YDR227W 4077 nt1.96□□□□□ -2.1
RAD3P06839 DFG16YOR030W 1860 nt1.95□□□□□ -2.1
RAD3P06839 ARP7YPR034W 1434 nt1.95□□□□□ -2.1
RAD3P06839 YCR013CYCR013C 648 nt1.95□□□□□ -2.1
RAD3P06839 ATP16YDL004W 483 nt1.95□□□□□ -2.1
RAD3P06839 snR78snR78 87 nt1.95□□□□□ -2.1
RAD3P06839 SLU7YDR088C 1149 nt1.95□□□□□ -2.1
RAD3P06839 MIX23YBL107C 591 nt1.95□□□□□ -2.1
RAD3P06839 SPR2YOR214C 711 nt1.95□□□□□ -2.1
RAD3P06839 RRP6YOR001W 2202 nt1.95□□□□□ -2.1
RAD3P06839 YPS5YGL259W 498 nt1.94□□□□□ -2.1
RAD3P06839 TPK3YKL166C 1197 nt1.94□□□□□ -2.1
RAD3P06839 YLR379WYLR379W 375 nt1.94□□□□□ -2.1
RAD3P06839 SRL4YPL033C 846 nt1.94□□□□□ -2.1
RAD3P06839 YBR051WYBR051W 351 nt1.94□□□□□ -2.1
RAD3P06839 YBR062CYBR062C 543 nt1.94□□□□□ -2.1
RAD3P06839 IPT1YDR072C 1584 nt1.93□□□□□ -2.1
RAD3P06839 CTF13YMR094W 1437 nt1.93□□□□□ -2.1
RAD3P06839 CDC37YDR168W 1521 nt1.93□□□□□ -2.1
RAD3P06839 YGR226CYGR226C 210 nt1.93□□□□□ -2.1
RAD3P06839 EST3YIL009C-A 546 nt1.93□□□□□ -2.1
RAD3P06839 YJL156W-AYJL156W-A 222 nt1.93□□□□□ -2.1
RAD3P06839 YMR247W-AYMR247W-A 144 nt1.93□□□□□ -2.1
RAD3P06839 YOL085W-AYOL085W-A 213 nt1.93□□□□□ -2.1
RAD3P06839 YOL106WYOL106W 354 nt1.93□□□□□ -2.1
RAD3P06839 VPH1YOR270C 2523 nt1.93□□□□□ -2.1
RAD3P06839 RUD3YOR216C 1455 nt1.93□□□□□ -2.1
RAD3P06839 RNH70YGR276C 1662 nt1.93□□□□□ -2.1
RAD3P06839 COX13YGL191W 390 nt1.92□□□□□ -2.1
RAD3P06839 MET18YIL128W 3099 nt1.92□□□□□ -2.1
RAD3P06839 SSF1YHR066W 1362 nt1.92□□□□□ -2.1
RAD3P06839 RTT101YJL047C 2529 nt1.92□□□□□ -2.1
RAD3P06839 LST4YKL176C 2487 nt1.92□□□□□ -2.1
RAD3P06839 YJL070CYJL070C 2667 nt1.92□□□□□ -2.1
RAD3P06839 LHS1YKL073W 2646 nt1.91□□□□□ -2.1
RAD3P06839 VPS8YAL002W 3825 nt1.91□□□□□ -2.1
RAD3P06839 SAG1YJR004C 1953 nt1.91□□□□□ -2.1
RAD3P06839 PRP38YGR075C 729 nt1.91□□□□□ -2.1
RAD3P06839 BMT5YIL096C 1011 nt1.91□□□□□ -2.1
RAD3P06839 YLR366WYLR366W 306 nt1.91□□□□□ -2.1
RAD3P06839 COX8YLR395C 237 nt1.91□□□□□ -2.1
RAD3P06839 YBL068W-AYBL068W-A 237 nt1.91□□□□□ -2.1
RAD3P06839 RTT107YHR154W 3213 nt1.91□□□□□ -2.1
RAD3P06839 YMR045CYMR045C 5268 nt1.9□□□□□ -2.1
RAD3P06839 RSM27YGR215W 333 nt1.9□□□□□ -2.11
RAD3P06839 CAP1YKL007W 807 nt1.9□□□□□ -2.11
RAD3P06839 YKR051WYKR051W 1257 nt1.9□□□□□ -2.11
RAD3P06839 MED8YBR193C 672 nt1.9□□□□□ -2.11
RAD3P06839 GAL80YML051W 1308 nt1.9□□□□□ -2.11
RAD3P06839 YJR098CYJR098C 1971 nt1.89□□□□□ -2.11
RAD3P06839 TRL1YJL087C 2484 nt1.89□□□□□ -2.11
RAD3P06839 YIL058WYIL058W 285 nt1.89□□□□□ -2.11
RAD3P06839 YMR173W-AYMR173W-A 1185 nt1.89□□□□□ -2.11
RAD3P06839 GIM3YNL153C 390 nt1.89□□□□□ -2.11
RAD3P06839 YNR021WYNR021W 1215 nt1.89□□□□□ -2.11
RAD3P06839 SFM1YOR021C 642 nt1.89□□□□□ -2.11
RAD3P06839 KIP1YBL063W 3336 nt1.89□□□□□ -2.11
RAD3P06839 ATG9YDL149W 2994 nt1.89□□□□□ -2.11
RAD3P06839 DNF3YMR162C 4971 nt1.88□□□□□ -2.11
RAD3P06839 SHS1YDL225W 1656 nt1.88□□□□□ -2.11
RAD3P06839 YCR081C-AYCR081C-A 237 nt1.88□□□□□ -2.11
RAD3P06839 YFR056CYFR056C 369 nt1.88□□□□□ -2.11
RAD3P06839 YGL230CYGL230C 444 nt1.88□□□□□ -2.11
RAD3P06839 SHE2YKL130C 741 nt1.88□□□□□ -2.11
RAD3P06839 RXT2YBR095C 1293 nt1.88□□□□□ -2.11
RAD3P06839 VID24YBR105C 1089 nt1.88□□□□□ -2.11
RAD3P06839 VPS34YLR240W 2628 nt1.88□□□□□ -2.11
RAD3P06839 ECM25YJL201W 1800 nt1.88□□□□□ -2.11
RAD3P06839 YLR035C-AYLR035C-A 3468 nt1.88□□□□□ -2.11
RAD3P06839 PDR8YLR266C 2106 nt1.88□□□□□ -2.11
RAD3P06839 PKH3YDR466W 2697 nt1.88□□□□□ -2.11
RAD3P06839 SNF12YNR023W 1701 nt1.88□□□□□ -2.11
RAD3P06839 BUD2YKL092C 3315 nt1.88□□□□□ -2.11
RAD3P06839 NIC96YFR002W 2520 nt1.87□□□□□ -2.11
RAD3P06839 YJL016WYJL016W 1686 nt1.87□□□□□ -2.11
RAD3P06839 RPS26BYER131W 360 nt1.87□□□□□ -2.11
RAD3P06839 THG1YGR024C 714 nt1.87□□□□□ -2.11
RAD3P06839 CSE4YKL049C 690 nt1.87□□□□□ -2.11
RAD3P06839 YET1YKL065C 621 nt1.87□□□□□ -2.11
RAD3P06839 ATG38YLR211C 681 nt1.87□□□□□ -2.11
RAD3P06839 GIM5YML094W 492 nt1.87□□□□□ -2.11
RAD3P06839 YMR272W-BYMR272W-B 108 nt1.87□□□□□ -2.11
RAD3P06839 YOR392WYOR392W 444 nt1.87□□□□□ -2.11
RAD3P06839 ARL1YBR164C 552 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 29.3 ms