Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
ZNF407Q9C0G0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF407Q9C0G0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 GCSHP5-201ENST00000443090 522 ntBASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 Z98882.1-201ENST00000622160 2253 ntBASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 KRT18P68-201ENST00000392293 1000 ntBASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 PNMA6B-201ENST00000538162 1200 ntBASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 AC008403.3-201ENST00000598924 454 ntBASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 AC105020.6-201ENST00000621523 1217 ntBASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ZNF407Q9C0G0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 AC060766.5-201ENST00000590539 871 ntBASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 AL356652.1-201ENST00000615962 565 ntBASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF407Q9C0G0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF407Q9C0G0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF407Q9C0G0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF407Q9C0G0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF407Q9C0G0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 KRT18P29-201ENST00000397031 1267 ntBASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms