Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 VID24YBR105C 1089 nt1.13□□□□□ -2.23
TY1B-NL1Q12112 THO2YNL139C 4794 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 YGL262WYGL262W 528 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 TIM21YGR033C 720 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 MCR1YKL150W 909 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 YNL234WYNL234W 1281 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 HMS1YOR032C 1305 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 MUS81YDR386W 1899 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 TRS65YGR166W 1683 nt1.12□□□□□ -2.23
TY1B-NL1Q12112 YER066C-AYER066C-A 501 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 SEC4YFL005W 648 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 YKL145W-AYKL145W-A 93 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 YKL156C-AYKL156C-A 117 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 EBP2YKL172W 1284 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 YNL143CYNL143C 393 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 YOR263CYOR263C 408 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 IRC3YDR332W 2070 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 APD1YBR151W 951 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 RAD9YDR217C 3930 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 VPS9YML097C 1356 nt1.11□□□□□ -2.23
TY1B-NL1Q12112 SNF5YBR289W 2718 nt1.1□□□□□ -2.23
TY1B-NL1Q12112 RPS26BYER131W 360 nt1.1□□□□□ -2.23
TY1B-NL1Q12112 YGR015CYGR015C 987 nt1.1□□□□□ -2.23
TY1B-NL1Q12112 CBF2YGR140W 2871 nt1.1□□□□□ -2.23
TY1B-NL1Q12112 RED1YLR263W 2484 nt1.1□□□□□ -2.23
TY1B-NL1Q12112 STN1YDR082W 1485 nt1.09□□□□□ -2.23
TY1B-NL1Q12112 EAF1YDR359C 2949 nt1.09□□□□□ -2.23
TY1B-NL1Q12112 YPR148CYPR148C 1308 nt1.09□□□□□ -2.23
TY1B-NL1Q12112 BSC2YDR275W 708 nt1.08□□□□□ -2.24
TY1B-NL1Q12112 URM1YIL008W 300 nt1.08□□□□□ -2.24
TY1B-NL1Q12112 YBL083CYBL083C 426 nt1.08□□□□□ -2.24
TY1B-NL1Q12112 MSS11YMR164C 2277 nt1.08□□□□□ -2.24
TY1B-NL1Q12112 YCL068CYCL068C 783 nt1.08□□□□□ -2.24
TY1B-NL1Q12112 TBS1YBR150C 3285 nt1.08□□□□□ -2.24
TY1B-NL1Q12112 ATP22YDR350C 2055 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 CDC36YDL165W 576 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 YGR026WYGR026W 837 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 RSR1YGR152C 819 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 NOP19YGR251W 591 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 MTG1YMR097C 1104 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 YOR062CYOR062C 807 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 SEC59YMR013C 1560 nt1.07□□□□□ -2.24
TY1B-NL1Q12112 YDR098C-AYDR098C-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YDR210C-CYDR210C-C 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YDR261C-CYDR261C-C 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YDR316W-AYDR316W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YDR365W-AYDR365W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YER137C-AYER137C-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YER159C-AYER159C-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YGR027W-AYGR027W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YGR038C-AYGR038C-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YGR161C-CYGR161C-C 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YJR026WYJR026W 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YJR028WYJR028W 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YAR010CYAR010C 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YLR157C-AYLR157C-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YLR227W-AYLR227W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YLR256W-AYLR256W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YML040WYML040W 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YML045W-AYML045W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YMR051CYMR051C 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YNL054W-AYNL054W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YNL284C-AYNL284C-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YOL103W-AYOL103W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YBR012W-AYBR012W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YOR142W-AYOR142W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YPL257W-AYPL257W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YPR137C-AYPR137C-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YPR158C-CYPR158C-C 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YPR158W-AYPR158W-A 1323 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 TIM11YDR322C-A 291 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 EMC2YJR088C 879 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YJL202CYJL202C 348 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YOL114CYOL114C 609 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YBR096WYBR096W 693 nt1.06□□□□□ -2.24
TY1B-NL1Q12112 YBR138CYBR138C 1575 nt1.05□□□□□ -2.24
TY1B-NL1Q12112 YLR108CYLR108C 1458 nt1.04□□□□□ -2.24
TY1B-NL1Q12112 MPS1YDL028C 2295 nt1.04□□□□□ -2.24
TY1B-NL1Q12112 SET3YKR029C 2256 nt1.04□□□□□ -2.24
TY1B-NL1Q12112 SSP1YHR184W 1716 nt1.04□□□□□ -2.24
TY1B-NL1Q12112 RPL16AYIL133C 600 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 SFT1YKL006C-A 294 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 HSH49YOR319W 642 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 USV1YPL230W 1176 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 MNL2YLR057W 2550 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 APL1YJR005W 2103 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 RPS17BYDR447C 411 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 RIO2YNL207W 1278 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 ISA2YPR067W 558 nt1.03□□□□□ -2.24
TY1B-NL1Q12112 APL3YBL037W 3078 nt1.02□□□□□ -2.25
TY1B-NL1Q12112 ASG1YIL130W 2895 nt1.02□□□□□ -2.25
TY1B-NL1Q12112 SPR3YGR059W 1539 nt1.02□□□□□ -2.25
TY1B-NL1Q12112 YJL133C-AYJL133C-A 225 nt1.02□□□□□ -2.25
TY1B-NL1Q12112 YKL069WYKL069W 543 nt1.02□□□□□ -2.25
TY1B-NL1Q12112 SDC1YDR469W 528 nt1.01□□□□□ -2.25
TY1B-NL1Q12112 CSM2YIL132C 642 nt1.01□□□□□ -2.25
TY1B-NL1Q12112 YCS4YLR272C 3531 nt1.01□□□□□ -2.25
TY1B-NL1Q12112 TFB1YDR311W 1929 nt1.01□□□□□ -2.25
TY1B-NL1Q12112 KAP120YPL125W 3099 nt1.01□□□□□ -2.25
TY1B-NL1Q12112 LEU3YLR451W 2661 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 21 ms