Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 SSE1YPL106C 2082 nt1.8□□□□□ -2.12
CUE1P38428 GCN4YEL009C 846 nt1.8□□□□□ -2.12
CUE1P38428 SUI2YJR007W 915 nt1.8□□□□□ -2.12
CUE1P38428 ARR2YPR200C 393 nt1.8□□□□□ -2.12
CUE1P38428 SSF1YHR066W 1362 nt1.8□□□□□ -2.12
CUE1P38428 SCH9YHR205W 2475 nt1.8□□□□□ -2.12
CUE1P38428 ATG9YDL149W 2994 nt1.8□□□□□ -2.12
CUE1P38428 YJL052C-AYJL052C-A 120 nt1.79□□□□□ -2.12
CUE1P38428 UBC12YLR306W 567 nt1.79□□□□□ -2.12
CUE1P38428 ICY1YMR195W 384 nt1.79□□□□□ -2.12
CUE1P38428 GIM3YNL153C 390 nt1.79□□□□□ -2.12
CUE1P38428 YBR051WYBR051W 351 nt1.79□□□□□ -2.12
CUE1P38428 YBR062CYBR062C 543 nt1.79□□□□□ -2.12
CUE1P38428 MED8YBR193C 672 nt1.79□□□□□ -2.12
CUE1P38428 SPT14YPL175W 1359 nt1.79□□□□□ -2.12
CUE1P38428 CST9YLR394W 1449 nt1.79□□□□□ -2.12
CUE1P38428 ASG1YIL130W 2895 nt1.79□□□□□ -2.12
CUE1P38428 UBP2YOR124C 3819 nt1.78□□□□□ -2.12
CUE1P38428 NGG1YDR176W 2109 nt1.78□□□□□ -2.12
CUE1P38428 PDR8YLR266C 2106 nt1.78□□□□□ -2.12
CUE1P38428 CDC37YDR168W 1521 nt1.78□□□□□ -2.12
CUE1P38428 URK1YNR012W 1506 nt1.78□□□□□ -2.12
CUE1P38428 RAV2YDR202C 1056 nt1.78□□□□□ -2.12
CUE1P38428 RPS24AYER074W 408 nt1.78□□□□□ -2.12
CUE1P38428 OST5YGL226C-A 261 nt1.78□□□□□ -2.12
CUE1P38428 PRP38YGR075C 729 nt1.78□□□□□ -2.12
CUE1P38428 YHR071C-AYHR071C-A 321 nt1.78□□□□□ -2.12
CUE1P38428 SHE2YKL130C 741 nt1.78□□□□□ -2.12
CUE1P38428 YKR051WYKR051W 1257 nt1.78□□□□□ -2.12
CUE1P38428 DGR1YNL130C-A 147 nt1.78□□□□□ -2.12
CUE1P38428 YNR021WYNR021W 1215 nt1.78□□□□□ -2.12
CUE1P38428 YOL085W-AYOL085W-A 213 nt1.78□□□□□ -2.12
CUE1P38428 MF(ALPHA)1YPL187W 498 nt1.78□□□□□ -2.12
CUE1P38428 RRP12YPL012W 3687 nt1.78□□□□□ -2.12
CUE1P38428 REV3YPL167C 4515 nt1.78□□□□□ -2.12
CUE1P38428 SSY1YDR160W 2559 nt1.78□□□□□ -2.12
CUE1P38428 RTT101YJL047C 2529 nt1.78□□□□□ -2.12
CUE1P38428 VPH1YOR270C 2523 nt1.78□□□□□ -2.12
CUE1P38428 UBR2YLR024C 5619 nt1.77□□□□□ -2.13
CUE1P38428 UTP22YGR090W 3714 nt1.77□□□□□ -2.13
CUE1P38428 RAD18YCR066W 1464 nt1.77□□□□□ -2.13
CUE1P38428 YJL156W-AYJL156W-A 222 nt1.77□□□□□ -2.13
CUE1P38428 RPS30AYLR287C-A 192 nt1.77□□□□□ -2.13
CUE1P38428 COX8YLR395C 237 nt1.77□□□□□ -2.13
CUE1P38428 SFM1YOR021C 642 nt1.77□□□□□ -2.13
CUE1P38428 ATX2YOR079C 942 nt1.77□□□□□ -2.13
CUE1P38428 ALK2YBL009W 2031 nt1.77□□□□□ -2.13
CUE1P38428 MGA2YIR033W 3342 nt1.77□□□□□ -2.13
CUE1P38428 LST4YKL176C 2487 nt1.76□□□□□ -2.13
CUE1P38428 SLU7YDR088C 1149 nt1.76□□□□□ -2.13
CUE1P38428 YGL165CYGL165C 579 nt1.76□□□□□ -2.13
CUE1P38428 YPS5YGL259W 498 nt1.76□□□□□ -2.13
CUE1P38428 CUP1-1YHR053C 186 nt1.76□□□□□ -2.13
CUE1P38428 CUP1-2YHR055C 186 nt1.76□□□□□ -2.13
CUE1P38428 YMR173W-AYMR173W-A 1185 nt1.76□□□□□ -2.13
CUE1P38428 SNF12YNR023W 1701 nt1.76□□□□□ -2.13
CUE1P38428 TRL1YJL087C 2484 nt1.76□□□□□ -2.13
CUE1P38428 YDR199WYDR199W 366 nt1.75□□□□□ -2.13
CUE1P38428 BTN2YGR142W 1233 nt1.75□□□□□ -2.13
CUE1P38428 EST3YIL009C-A 546 nt1.75□□□□□ -2.13
CUE1P38428 GPX1YKL026C 504 nt1.75□□□□□ -2.13
CUE1P38428 TPK3YKL166C 1197 nt1.75□□□□□ -2.13
CUE1P38428 RPS22BYLR367W 393 nt1.75□□□□□ -2.13
CUE1P38428 MES1YGR264C 2256 nt1.75□□□□□ -2.13
CUE1P38428 YMR045CYMR045C 5268 nt1.75□□□□□ -2.13
CUE1P38428 BRE1YDL074C 2103 nt1.75□□□□□ -2.13
CUE1P38428 YHR214C-BYHR214C-B 5382 nt1.75□□□□□ -2.13
CUE1P38428 CFT2YLR115W 2580 nt1.74□□□□□ -2.13
CUE1P38428 YDL118WYDL118W 381 nt1.74□□□□□ -2.13
CUE1P38428 PIB1YDR313C 861 nt1.74□□□□□ -2.13
CUE1P38428 IRC4YDR540C 540 nt1.74□□□□□ -2.13
CUE1P38428 STE2YFL026W 1296 nt1.74□□□□□ -2.13
CUE1P38428 YFR056CYFR056C 369 nt1.74□□□□□ -2.13
CUE1P38428 ATP7YKL016C 525 nt1.74□□□□□ -2.13
CUE1P38428 SWM2YNR004W 441 nt1.74□□□□□ -2.13
CUE1P38428 SSQ1YLR369W 1974 nt1.74□□□□□ -2.13
CUE1P38428 NCB2YDR397C 441 nt1.73□□□□□ -2.13
CUE1P38428 CAJ1YER048C 1176 nt1.73□□□□□ -2.13
CUE1P38428 YKR075W-AYKR075W-A 270 nt1.73□□□□□ -2.13
CUE1P38428 ATG38YLR211C 681 nt1.73□□□□□ -2.13
CUE1P38428 MTG1YMR097C 1104 nt1.73□□□□□ -2.13
CUE1P38428 ARL1YBR164C 552 nt1.73□□□□□ -2.13
CUE1P38428 YFR016CYFR016C 3702 nt1.73□□□□□ -2.13
CUE1P38428 UFD4YKL010C 4452 nt1.73□□□□□ -2.13
CUE1P38428 ECM25YJL201W 1800 nt1.73□□□□□ -2.13
CUE1P38428 YNL034WYNL034W 1839 nt1.73□□□□□ -2.13
CUE1P38428 NIC96YFR002W 2520 nt1.72□□□□□ -2.13
CUE1P38428 SHS1YDL225W 1656 nt1.72□□□□□ -2.13
CUE1P38428 YCR081C-AYCR081C-A 237 nt1.72□□□□□ -2.13
CUE1P38428 UBC5YDR059C 447 nt1.72□□□□□ -2.13
CUE1P38428 RPS26BYER131W 360 nt1.72□□□□□ -2.13
CUE1P38428 BRP1YGL007W 378 nt1.72□□□□□ -2.13
CUE1P38428 RLP24YLR009W 600 nt1.72□□□□□ -2.13
CUE1P38428 RBL2YOR265W 321 nt1.72□□□□□ -2.13
CUE1P38428 YOR333CYOR333C 417 nt1.72□□□□□ -2.13
CUE1P38428 MSS18YPR134W 807 nt1.72□□□□□ -2.13
CUE1P38428 VID24YBR105C 1089 nt1.72□□□□□ -2.13
CUE1P38428 KOG1YHR186C 4674 nt1.72□□□□□ -2.13
CUE1P38428 IRC20YLR247C 4671 nt1.71□□□□□ -2.14
CUE1P38428 FMP16YDR070C 282 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 36.5 ms