Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 XRN1YGL173C 4587 nt3.12□□□□□ -1.91
HRD3Q05787 RGC1YPR115W 3252 nt3.12□□□□□ -1.91
HRD3Q05787 SKP2YNL311C 2292 nt3.12□□□□□ -1.91
HRD3Q05787 ATP25YMR098C 1839 nt3.12□□□□□ -1.91
HRD3Q05787 CCM1YGR150C 2595 nt3.11□□□□□ -1.91
HRD3Q05787 CBP2YHL038C 1893 nt3.11□□□□□ -1.91
HRD3Q05787 MRH1YDR033W 963 nt3.11□□□□□ -1.91
HRD3Q05787 YGR242WYGR242W 309 nt3.11□□□□□ -1.91
HRD3Q05787 YKL033W-AYKL033W-A 711 nt3.11□□□□□ -1.91
HRD3Q05787 MRP8YKL142W 660 nt3.11□□□□□ -1.91
HRD3Q05787 YNL146WYNL146W 303 nt3.11□□□□□ -1.91
HRD3Q05787 RRD2YPL152W 1077 nt3.11□□□□□ -1.91
HRD3Q05787 YME2YMR302C 2553 nt3.11□□□□□ -1.91
HRD3Q05787 ENA2YDR039C 3276 nt3.11□□□□□ -1.91
HRD3Q05787 ENA1YDR040C 3276 nt3.11□□□□□ -1.91
HRD3Q05787 SPE1YKL184W 1401 nt3.1□□□□□ -1.91
HRD3Q05787 VAC8YEL013W 1737 nt3.1□□□□□ -1.91
HRD3Q05787 PBS2YJL128C 2007 nt3.1□□□□□ -1.91
HRD3Q05787 TOP1YOL006C 2310 nt3.1□□□□□ -1.91
HRD3Q05787 BYE1YKL005C 1785 nt3.1□□□□□ -1.91
HRD3Q05787 MDM1YML104C 3384 nt3.1□□□□□ -1.91
HRD3Q05787 YCR090CYCR090C 549 nt3.1□□□□□ -1.91
HRD3Q05787 YDR008CYDR008C 351 nt3.1□□□□□ -1.91
HRD3Q05787 STE14YDR410C 720 nt3.1□□□□□ -1.91
HRD3Q05787 YGR121W-AYGR121W-A 216 nt3.1□□□□□ -1.91
HRD3Q05787 CRG1YHR209W 876 nt3.1□□□□□ -1.91
HRD3Q05787 YJL169WYJL169W 369 nt3.1□□□□□ -1.91
HRD3Q05787 YAL031W-AYAL031W-A 309 nt3.1□□□□□ -1.91
HRD3Q05787 RMP1YLR145W 606 nt3.1□□□□□ -1.91
HRD3Q05787 YMR294W-AYMR294W-A 360 nt3.1□□□□□ -1.91
HRD3Q05787 YPR197CYPR197C 564 nt3.1□□□□□ -1.91
HRD3Q05787 VID24YBR105C 1089 nt3.1□□□□□ -1.91
HRD3Q05787 YBR012W-AYBR012W-A 1323 nt3.1□□□□□ -1.91
HRD3Q05787 YOR142W-AYOR142W-A 1323 nt3.1□□□□□ -1.91
HRD3Q05787 YPR158W-AYPR158W-A 1323 nt3.1□□□□□ -1.91
HRD3Q05787 YCK2YNL154C 1641 nt3.09□□□□□ -1.91
HRD3Q05787 NSP1YJL041W 2472 nt3.09□□□□□ -1.91
HRD3Q05787 BMH2YDR099W 822 nt3.09□□□□□ -1.91
HRD3Q05787 YDR149CYDR149C 708 nt3.09□□□□□ -1.91
HRD3Q05787 GPI19YDR437W 423 nt3.09□□□□□ -1.91
HRD3Q05787 RPL1BYGL135W 654 nt3.09□□□□□ -1.91
HRD3Q05787 NBL1YHR199C-A 222 nt3.09□□□□□ -1.91
HRD3Q05787 OST6YML019W 999 nt3.09□□□□□ -1.91
HRD3Q05787 YOL085W-AYOL085W-A 213 nt3.09□□□□□ -1.91
HRD3Q05787 RPL1AYPL220W 654 nt3.09□□□□□ -1.91
HRD3Q05787 SSP1YHR184W 1716 nt3.09□□□□□ -1.91
HRD3Q05787 JJJ2YJL162C 1752 nt3.09□□□□□ -1.91
HRD3Q05787 YHR214C-CYHR214C-C 1437 nt3.09□□□□□ -1.92
HRD3Q05787 YMR018WYMR018W 1545 nt3.09□□□□□ -1.92
HRD3Q05787 PDS5YMR076C 3834 nt3.08□□□□□ -1.92
HRD3Q05787 CIN1YOR349W 3045 nt3.08□□□□□ -1.92
HRD3Q05787 LCB4YOR171C 1875 nt3.08□□□□□ -1.92
HRD3Q05787 YER091C-AYER091C-A 222 nt3.08□□□□□ -1.92
HRD3Q05787 YGL042CYGL042C 306 nt3.08□□□□□ -1.92
HRD3Q05787 TCD1YHR003C 1290 nt3.08□□□□□ -1.92
HRD3Q05787 HIT1YJR055W 495 nt3.08□□□□□ -1.92
HRD3Q05787 RNP1YLL046C 750 nt3.08□□□□□ -1.92
HRD3Q05787 YDL180WYDL180W 1644 nt3.08□□□□□ -1.92
HRD3Q05787 NMD2YHR077C 3270 nt3.08□□□□□ -1.92
HRD3Q05787 HEH2YDR458C 1992 nt3.07□□□□□ -1.92
HRD3Q05787 DBP10YDL031W 2988 nt3.07□□□□□ -1.92
HRD3Q05787 ROG1YGL144C 2058 nt3.07□□□□□ -1.92
HRD3Q05787 SMB1YER029C 591 nt3.07□□□□□ -1.92
HRD3Q05787 HMF1YER057C 390 nt3.07□□□□□ -1.92
HRD3Q05787 YKL066WYKL066W 444 nt3.07□□□□□ -1.92
HRD3Q05787 MRPL38YKL170W 417 nt3.07□□□□□ -1.92
HRD3Q05787 YOL134CYOL134C 390 nt3.07□□□□□ -1.92
HRD3Q05787 YBR032WYBR032W 303 nt3.07□□□□□ -1.92
HRD3Q05787 YSY6YBR162W-A 198 nt3.07□□□□□ -1.92
HRD3Q05787 TLC1TLC1 1301 nt3.07□□□□□ -1.92
HRD3Q05787 SIZ1YDR409W 2715 nt3.06□□□□□ -1.92
HRD3Q05787 YDR431WYDR431W 312 nt3.06□□□□□ -1.92
HRD3Q05787 RPL23BYER117W 414 nt3.06□□□□□ -1.92
HRD3Q05787 YAL026C-AYAL026C-A 438 nt3.06□□□□□ -1.92
HRD3Q05787 CDC33YOL139C 642 nt3.06□□□□□ -1.92
HRD3Q05787 YPL185WYPL185W 396 nt3.06□□□□□ -1.92
HRD3Q05787 ALY1YKR021W 2748 nt3.06□□□□□ -1.92
HRD3Q05787 CHS2YBR038W 2892 nt3.05□□□□□ -1.92
HRD3Q05787 RPS26BYER131W 360 nt3.05□□□□□ -1.92
HRD3Q05787 LSM1YJL124C 519 nt3.05□□□□□ -1.92
HRD3Q05787 YLR302CYLR302C 363 nt3.05□□□□□ -1.92
HRD3Q05787 COX14YML129C 213 nt3.05□□□□□ -1.92
HRD3Q05787 PEX11YOL147C 711 nt3.05□□□□□ -1.92
HRD3Q05787 EMP70YLR083C 2004 nt3.05□□□□□ -1.92
HRD3Q05787 SLP1YOR154W 1764 nt3.05□□□□□ -1.92
HRD3Q05787 SRC1YML034W 2505 nt3.04□□□□□ -1.92
HRD3Q05787 21S_rRNA21S_rRNA 3296 nt3.04□□□□□ -1.92
HRD3Q05787 FLO9YAL063C 3969 nt3.04□□□□□ -1.92
HRD3Q05787 ECM21YBL101C 3354 nt3.04□□□□□ -1.92
HRD3Q05787 SET1YHR119W 3243 nt3.04□□□□□ -1.92
HRD3Q05787 VFA1YER128W 612 nt3.04□□□□□ -1.92
HRD3Q05787 YPS5YGL259W 498 nt3.04□□□□□ -1.92
HRD3Q05787 RPS20YHL015W 366 nt3.04□□□□□ -1.92
HRD3Q05787 YLR230WYLR230W 306 nt3.04□□□□□ -1.92
HRD3Q05787 YML099W-AYML099W-A 330 nt3.04□□□□□ -1.92
HRD3Q05787 YPR077CYPR077C 372 nt3.04□□□□□ -1.92
HRD3Q05787 SKN7YHR206W 1869 nt3.04□□□□□ -1.92
HRD3Q05787 MES1YGR264C 2256 nt3.04□□□□□ -1.92
HRD3Q05787 GYL1YMR192W 2163 nt3.04□□□□□ -1.92
HRD3Q05787 GPI17YDR434W 1605 nt3.04□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 61 ms