Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 SEC31YDL195W 3822 nt2.18□□□□□ -2.06
RAD3P06839 YDR537CYDR537C 606 nt2.18□□□□□ -2.06
RAD3P06839 TWF1YGR080W 999 nt2.18□□□□□ -2.06
RAD3P06839 MRPS8YMR158W 468 nt2.18□□□□□ -2.06
RAD3P06839 SEC66YBR171W 621 nt2.18□□□□□ -2.06
RAD3P06839 COG3YER157W 2406 nt2.18□□□□□ -2.06
RAD3P06839 ALY1YKR021W 2748 nt2.18□□□□□ -2.06
RAD3P06839 KOG1YHR186C 4674 nt2.17□□□□□ -2.06
RAD3P06839 NUP100YKL068W 2880 nt2.17□□□□□ -2.06
RAD3P06839 BRP1YGL007W 378 nt2.17□□□□□ -2.06
RAD3P06839 GEP7YGL057C 864 nt2.17□□□□□ -2.06
RAD3P06839 EMP24YGL200C 612 nt2.17□□□□□ -2.06
RAD3P06839 AIM23YJL131C 1071 nt2.17□□□□□ -2.06
RAD3P06839 YKL069WYKL069W 543 nt2.17□□□□□ -2.06
RAD3P06839 UTP30YKR060W 825 nt2.17□□□□□ -2.06
RAD3P06839 YOL159C-AYOL159C-A 273 nt2.17□□□□□ -2.06
RAD3P06839 snR24snR24 89 nt2.17□□□□□ -2.06
RAD3P06839 BRE5YNR051C 1548 nt2.17□□□□□ -2.06
RAD3P06839 RUB1YDR139C 234 nt2.16□□□□□ -2.06
RAD3P06839 YKL115CYKL115C 393 nt2.16□□□□□ -2.06
RAD3P06839 RPF2YKR081C 1035 nt2.16□□□□□ -2.06
RAD3P06839 PAU8YAL068C 363 nt2.16□□□□□ -2.06
RAD3P06839 YLR050CYLR050C 486 nt2.16□□□□□ -2.06
RAD3P06839 YKE2YLR200W 345 nt2.16□□□□□ -2.06
RAD3P06839 PAU20YOL161C 363 nt2.16□□□□□ -2.06
RAD3P06839 YBR090CYBR090C 369 nt2.16□□□□□ -2.06
RAD3P06839 BRE1YDL074C 2103 nt2.15□□□□□ -2.06
RAD3P06839 GDI1YER136W 1356 nt2.15□□□□□ -2.07
RAD3P06839 COS111YBR203W 2775 nt2.15□□□□□ -2.07
RAD3P06839 GPI8YDR331W 1236 nt2.15□□□□□ -2.07
RAD3P06839 RPN9YDR427W 1182 nt2.15□□□□□ -2.07
RAD3P06839 GUK1YDR454C 564 nt2.15□□□□□ -2.07
RAD3P06839 YER119C-AYER119C-A 372 nt2.15□□□□□ -2.07
RAD3P06839 APA1YCL050C 966 nt2.15□□□□□ -2.07
RAD3P06839 UTP22YGR090W 3714 nt2.15□□□□□ -2.07
RAD3P06839 NUR1YDL089W 1455 nt2.14□□□□□ -2.07
RAD3P06839 UBP16YPL072W 1500 nt2.14□□□□□ -2.07
RAD3P06839 UBC13YDR092W 462 nt2.14□□□□□ -2.07
RAD3P06839 ADK1YDR226W 669 nt2.14□□□□□ -2.07
RAD3P06839 SRB7YDR308C 423 nt2.14□□□□□ -2.07
RAD3P06839 YER189WYER189W 369 nt2.14□□□□□ -2.07
RAD3P06839 YGL242CYGL242C 546 nt2.14□□□□□ -2.07
RAD3P06839 GTR2YGR163W 1026 nt2.14□□□□□ -2.07
RAD3P06839 YGR270C-AYGR270C-A 219 nt2.14□□□□□ -2.07
RAD3P06839 YCL007CYCL007C 393 nt2.14□□□□□ -2.07
RAD3P06839 ESA1YOR244W 1338 nt2.14□□□□□ -2.07
RAD3P06839 SSE1YPL106C 2082 nt2.13□□□□□ -2.07
RAD3P06839 VAB2YEL005C 849 nt2.13□□□□□ -2.07
RAD3P06839 YER046W-AYER046W-A 330 nt2.13□□□□□ -2.07
RAD3P06839 ATG10YLL042C 504 nt2.13□□□□□ -2.07
RAD3P06839 RPL16BYNL069C 597 nt2.13□□□□□ -2.07
RAD3P06839 YOL162WYOL162W 648 nt2.13□□□□□ -2.07
RAD3P06839 GPI17YDR434W 1605 nt2.13□□□□□ -2.07
RAD3P06839 CBF2YGR140W 2871 nt2.12□□□□□ -2.07
RAD3P06839 YPR097WYPR097W 3222 nt2.12□□□□□ -2.07
RAD3P06839 ALK2YBL009W 2031 nt2.12□□□□□ -2.07
RAD3P06839 YDR381C-AYDR381C-A 345 nt2.12□□□□□ -2.07
RAD3P06839 SDC1YDR469W 528 nt2.12□□□□□ -2.07
RAD3P06839 CKA1YIL035C 1119 nt2.12□□□□□ -2.07
RAD3P06839 POL32YJR043C 1053 nt2.12□□□□□ -2.07
RAD3P06839 YNR034W-AYNR034W-A 297 nt2.12□□□□□ -2.07
RAD3P06839 CSI2YOL007C 1026 nt2.12□□□□□ -2.07
RAD3P06839 MF(ALPHA)1YPL187W 498 nt2.12□□□□□ -2.07
RAD3P06839 YRR1YOR162C 2433 nt2.12□□□□□ -2.07
RAD3P06839 PCK1YKR097W 1650 nt2.12□□□□□ -2.07
RAD3P06839 BFR1YOR198C 1413 nt2.11□□□□□ -2.07
RAD3P06839 YDR203WYDR203W 318 nt2.11□□□□□ -2.07
RAD3P06839 YEA4YEL004W 1029 nt2.11□□□□□ -2.07
RAD3P06839 GLC7YER133W 939 nt2.11□□□□□ -2.07
RAD3P06839 OST5YGL226C-A 261 nt2.11□□□□□ -2.07
RAD3P06839 ACB1YGR037C 264 nt2.11□□□□□ -2.07
RAD3P06839 RFA3YJL173C 369 nt2.11□□□□□ -2.07
RAD3P06839 YLR154W-AYLR154W-A 186 nt2.11□□□□□ -2.07
RAD3P06839 RPS22BYLR367W 393 nt2.11□□□□□ -2.07
RAD3P06839 ATX1YNL259C 222 nt2.11□□□□□ -2.07
RAD3P06839 PEX27YOR193W 1131 nt2.11□□□□□ -2.07
RAD3P06839 PEX34YCL056C 435 nt2.11□□□□□ -2.07
RAD3P06839 YOR093CYOR093C 4947 nt2.11□□□□□ -2.07
RAD3P06839 ARP5YNL059C 2268 nt2.11□□□□□ -2.07
RAD3P06839 ESC2YDR363W 1371 nt2.1□□□□□ -2.07
RAD3P06839 YEL043WYEL043W 2871 nt2.1□□□□□ -2.07
RAD3P06839 YER091C-AYER091C-A 222 nt2.1□□□□□ -2.07
RAD3P06839 RPS17AYML024W 411 nt2.1□□□□□ -2.07
RAD3P06839 SME1YOR159C 285 nt2.1□□□□□ -2.07
RAD3P06839 YOR366WYOR366W 354 nt2.1□□□□□ -2.07
RAD3P06839 BAS1YKR099W 2436 nt2.1□□□□□ -2.07
RAD3P06839 ATG11YPR049C 3537 nt2.09□□□□□ -2.07
RAD3P06839 UBR2YLR024C 5619 nt2.09□□□□□ -2.07
RAD3P06839 LRE1YCL051W 1752 nt2.09□□□□□ -2.07
RAD3P06839 RAV1YJR033C 4074 nt2.09□□□□□ -2.07
RAD3P06839 PET20YPL159C 762 nt2.09□□□□□ -2.07
RAD3P06839 SLM4YBR077C 489 nt2.09□□□□□ -2.07
RAD3P06839 MSS18YPR134W 807 nt2.09□□□□□ -2.07
RAD3P06839 ARR2YPR200C 393 nt2.09□□□□□ -2.07
RAD3P06839 YDR179W-AYDR179W-A 1392 nt2.09□□□□□ -2.08
RAD3P06839 FAB1YFR019W 6837 nt2.08□□□□□ -2.08
RAD3P06839 DAD4YDR320C-A 219 nt2.08□□□□□ -2.08
RAD3P06839 ECI1YLR284C 843 nt2.08□□□□□ -2.08
RAD3P06839 YMR158C-AYMR158C-A 138 nt2.08□□□□□ -2.08
RAD3P06839 RRT16YNL105W 429 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 53.4 ms