Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 AL136162.1-201ENST00000607711 1078 ntBASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 AC068587.7-201ENST00000641602 218 ntBASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-6A0A0B4J262 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 AC096631.2-201ENST00000436136 790 ntBASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 AC135279.3-201ENST00000610945 1311 ntBASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 LINC01960-201ENST00000563759 1884 ntBASIC15.1■□□□□ 0.01
TRAV8-6A0A0B4J262 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 AC098818.2-201ENST00000564925 2320 ntBASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-6A0A0B4J262 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-6A0A0B4J262 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
TRAV8-6A0A0B4J262 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV8-6A0A0B4J262 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-6A0A0B4J262 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV8-6A0A0B4J262 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 OR2I1P-207ENST00000453522 948 ntBASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 PBX2P1-201ENST00000493219 1291 ntBASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms