Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 ATG9YDL149W 2994 nt1.34□□□□□ -2.19
RKR1Q04781 MSL5YLR116W 1431 nt1.34□□□□□ -2.19
RKR1Q04781 RSM22YKL155C 1887 nt1.34□□□□□ -2.2
RKR1Q04781 NHP2YDL208W 471 nt1.34□□□□□ -2.2
RKR1Q04781 YDR124WYDR124W 975 nt1.34□□□□□ -2.2
RKR1Q04781 WBP1YEL002C 1293 nt1.34□□□□□ -2.2
RKR1Q04781 PRP18YGR006W 756 nt1.34□□□□□ -2.2
RKR1Q04781 VHR1YIL056W 1923 nt1.33□□□□□ -2.2
RKR1Q04781 ARG2YJL071W 1725 nt1.33□□□□□ -2.2
RKR1Q04781 RPL16BYNL069C 597 nt1.33□□□□□ -2.2
RKR1Q04781 SAR1YPL218W 573 nt1.32□□□□□ -2.2
RKR1Q04781 YSP1YHR155W 3687 nt1.31□□□□□ -2.2
RKR1Q04781 YKR075CYKR075C 924 nt1.31□□□□□ -2.2
RKR1Q04781 LSM2YBL026W 288 nt1.31□□□□□ -2.2
RKR1Q04781 RIO2YNL207W 1278 nt1.31□□□□□ -2.2
RKR1Q04781 TRM112YNR046W 408 nt1.31□□□□□ -2.2
RKR1Q04781 YPL071CYPL071C 471 nt1.31□□□□□ -2.2
RKR1Q04781 TRL1YJL087C 2484 nt1.31□□□□□ -2.2
RKR1Q04781 HCS1YKL017C 2052 nt1.3□□□□□ -2.2
RKR1Q04781 PEP8YJL053W 1140 nt1.3□□□□□ -2.2
RKR1Q04781 RKM4YDR257C 1485 nt1.29□□□□□ -2.2
RKR1Q04781 RPA34YJL148W 702 nt1.29□□□□□ -2.2
RKR1Q04781 SMD3YLR147C 306 nt1.29□□□□□ -2.2
RKR1Q04781 DIA2YOR080W 2199 nt1.29□□□□□ -2.2
RKR1Q04781 VAM6YDL077C 3150 nt1.28□□□□□ -2.2
RKR1Q04781 RPL11BYGR085C 525 nt1.28□□□□□ -2.2
RKR1Q04781 PNT1YOR266W 1272 nt1.28□□□□□ -2.2
RKR1Q04781 RPL11AYPR102C 525 nt1.28□□□□□ -2.2
RKR1Q04781 YSY6YBR162W-A 198 nt1.28□□□□□ -2.2
RKR1Q04781 YNL284C-BYNL284C-B 5268 nt1.28□□□□□ -2.2
RKR1Q04781 SLY41YOR307C 1362 nt1.28□□□□□ -2.21
RKR1Q04781 PSP1YDR505C 2526 nt1.28□□□□□ -2.21
RKR1Q04781 URA10YMR271C 684 nt1.27□□□□□ -2.21
RKR1Q04781 YOL159CYOL159C 516 nt1.27□□□□□ -2.21
RKR1Q04781 YBR089WYBR089W 600 nt1.27□□□□□ -2.21
RKR1Q04781 AIM4YBR194W 372 nt1.27□□□□□ -2.21
RKR1Q04781 YBR196C-BYBR196C-B 105 nt1.27□□□□□ -2.21
RKR1Q04781 YBR292CYBR292C 372 nt1.27□□□□□ -2.21
RKR1Q04781 MSS11YMR164C 2277 nt1.27□□□□□ -2.21
RKR1Q04781 ATP25YMR098C 1839 nt1.27□□□□□ -2.21
RKR1Q04781 SEC15YGL233W 2733 nt1.27□□□□□ -2.21
RKR1Q04781 RPS26BYER131W 360 nt1.26□□□□□ -2.21
RKR1Q04781 OTU2YHL013C 924 nt1.26□□□□□ -2.21
RKR1Q04781 URA5YML106W 681 nt1.26□□□□□ -2.21
RKR1Q04781 ARI1YGL157W 1044 nt1.25□□□□□ -2.21
RKR1Q04781 YDR170W-AYDR170W-A 1323 nt1.25□□□□□ -2.21
RKR1Q04781 MED1YPR070W 1701 nt1.25□□□□□ -2.21
RKR1Q04781 BUR2YLR226W 1188 nt1.25□□□□□ -2.21
RKR1Q04781 OST2YOR103C 393 nt1.25□□□□□ -2.21
RKR1Q04781 SPO24YPR036W-A 204 nt1.25□□□□□ -2.21
RKR1Q04781 LEU3YLR451W 2661 nt1.25□□□□□ -2.21
RKR1Q04781 TFB1YDR311W 1929 nt1.24□□□□□ -2.21
RKR1Q04781 CBF2YGR140W 2871 nt1.24□□□□□ -2.21
RKR1Q04781 YER087C-AYER087C-A 552 nt1.24□□□□□ -2.21
RKR1Q04781 RPF2YKR081C 1035 nt1.24□□□□□ -2.21
RKR1Q04781 YLR108CYLR108C 1458 nt1.24□□□□□ -2.21
RKR1Q04781 CMC4YMR194C-B 222 nt1.23□□□□□ -2.21
RKR1Q04781 VID24YBR105C 1089 nt1.23□□□□□ -2.21
RKR1Q04781 PLM2YDR501W 1566 nt1.23□□□□□ -2.21
RKR1Q04781 RIX1YHR197W 2292 nt1.22□□□□□ -2.21
RKR1Q04781 PKP2YGL059W 1476 nt1.22□□□□□ -2.21
RKR1Q04781 DPP1YDR284C 870 nt1.22□□□□□ -2.21
RKR1Q04781 YDR521WYDR521W 336 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)BtT(AGU)B 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)CtT(AGU)C 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)DtT(AGU)D 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)HtT(AGU)H 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)I1tT(AGU)I1 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)I2tT(AGU)I2 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)JtT(AGU)J 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)N1tT(AGU)N1 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)N2tT(AGU)N2 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)O1tT(AGU)O1 73 nt1.22□□□□□ -2.21
RKR1Q04781 tT(AGU)O2tT(AGU)O2 73 nt1.22□□□□□ -2.21
RKR1Q04781 NST1YNL091W 3723 nt1.22□□□□□ -2.21
RKR1Q04781 IGO1YNL157W 507 nt1.21□□□□□ -2.22
RKR1Q04781 YFL002W-AYFL002W-A 5313 nt1.21□□□□□ -2.22
RKR1Q04781 YGR161W-BYGR161W-B 5313 nt1.21□□□□□ -2.22
RKR1Q04781 YCL019WYCL019W 5313 nt1.21□□□□□ -2.22
RKR1Q04781 FIR1YER032W 2631 nt1.21□□□□□ -2.22
RKR1Q04781 MSS4YDR208W 2340 nt1.2□□□□□ -2.22
RKR1Q04781 YOR218CYOR218C 420 nt1.2□□□□□ -2.22
RKR1Q04781 YIL086CYIL086C 309 nt1.19□□□□□ -2.22
RKR1Q04781 SUB1YMR039C 879 nt1.19□□□□□ -2.22
RKR1Q04781 YVC1YOR087W 2028 nt1.19□□□□□ -2.22
RKR1Q04781 CTF18YMR078C 2226 nt1.19□□□□□ -2.22
RKR1Q04781 URM1YIL008W 300 nt1.18□□□□□ -2.22
RKR1Q04781 FMC1YIL098C 468 nt1.18□□□□□ -2.22
RKR1Q04781 SEC21YNL287W 2808 nt1.18□□□□□ -2.22
RKR1Q04781 YCL076WYCL076W 744 nt1.17□□□□□ -2.22
RKR1Q04781 HRT1YOL133W 366 nt1.17□□□□□ -2.22
RKR1Q04781 GAL7YBR018C 1101 nt1.17□□□□□ -2.22
RKR1Q04781 YGR237CYGR237C 2358 nt1.17□□□□□ -2.22
RKR1Q04781 RGL1YPL066W 1440 nt1.17□□□□□ -2.22
RKR1Q04781 ATP22YDR350C 2055 nt1.17□□□□□ -2.22
RKR1Q04781 RVS161YCR009C 798 nt1.17□□□□□ -2.22
RKR1Q04781 AI1Q0050 2505 nt1.16□□□□□ -2.22
RKR1Q04781 YIP3YNL044W 531 nt1.16□□□□□ -2.22
RKR1Q04781 IAH1YOR126C 717 nt1.16□□□□□ -2.22
RKR1Q04781 SET3YKR029C 2256 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 163.4 ms