Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 PEX34YCL056C 435 nt2.27□□□□□ -2.05
TDA11P38854 YBT1YLL048C 4986 nt2.27□□□□□ -2.05
TDA11P38854 VPS41YDR080W 2979 nt2.27□□□□□ -2.05
TDA11P38854 TCB2YNL087W 3537 nt2.26□□□□□ -2.05
TDA11P38854 SGS1YMR190C 4344 nt2.26□□□□□ -2.05
TDA11P38854 SMY2YBR172C 2223 nt2.26□□□□□ -2.05
TDA11P38854 MGM1YOR211C 2646 nt2.26□□□□□ -2.05
TDA11P38854 YHL002C-AYHL002C-A 489 nt2.26□□□□□ -2.05
TDA11P38854 YKU80YMR106C 1890 nt2.26□□□□□ -2.05
TDA11P38854 GCV2YMR189W 3105 nt2.26□□□□□ -2.05
TDA11P38854 YDR381C-AYDR381C-A 345 nt2.25□□□□□ -2.05
TDA11P38854 YLL044WYLL044W 447 nt2.25□□□□□ -2.05
TDA11P38854 ECI1YLR284C 843 nt2.25□□□□□ -2.05
TDA11P38854 YEL1YBL060W 2064 nt2.25□□□□□ -2.05
TDA11P38854 SLK19YOR195W 2466 nt2.25□□□□□ -2.05
TDA11P38854 TRM2YKR056W 1920 nt2.25□□□□□ -2.05
TDA11P38854 SRB4YER022W 2064 nt2.24□□□□□ -2.05
TDA11P38854 VTC3YPL019C 2508 nt2.24□□□□□ -2.05
TDA11P38854 UBP16YPL072W 1500 nt2.24□□□□□ -2.05
TDA11P38854 YGR050CYGR050C 357 nt2.24□□□□□ -2.05
TDA11P38854 GTR2YGR163W 1026 nt2.24□□□□□ -2.05
TDA11P38854 FYV4YHR059W 393 nt2.24□□□□□ -2.05
TDA11P38854 AYR1YIL124W 894 nt2.24□□□□□ -2.05
TDA11P38854 YAL037WYAL037W 804 nt2.24□□□□□ -2.05
TDA11P38854 PSY1YKL076C 384 nt2.24□□□□□ -2.05
TDA11P38854 RPS29AYLR388W 171 nt2.24□□□□□ -2.05
TDA11P38854 RGM1YMR182C 636 nt2.24□□□□□ -2.05
TDA11P38854 CBP6YBR120C 489 nt2.24□□□□□ -2.05
TDA11P38854 SEC66YBR171W 621 nt2.24□□□□□ -2.05
TDA11P38854 SCD5YOR329C 2619 nt2.24□□□□□ -2.05
TDA11P38854 NMA111YNL123W 2994 nt2.24□□□□□ -2.05
TDA11P38854 KRE33YNL132W 3171 nt2.24□□□□□ -2.05
TDA11P38854 PHO91YNR013C 2685 nt2.24□□□□□ -2.05
TDA11P38854 STI1YOR027W 1770 nt2.23□□□□□ -2.05
TDA11P38854 PDR11YIL013C 4236 nt2.23□□□□□ -2.05
TDA11P38854 SCH9YHR205W 2475 nt2.23□□□□□ -2.05
TDA11P38854 UBC13YDR092W 462 nt2.23□□□□□ -2.05
TDA11P38854 YDR262WYDR262W 819 nt2.23□□□□□ -2.05
TDA11P38854 KEI1YDR367W 666 nt2.23□□□□□ -2.05
TDA11P38854 PCL5YHR071W 690 nt2.23□□□□□ -2.05
TDA11P38854 YIR021W-AYIR021W-A 213 nt2.23□□□□□ -2.05
TDA11P38854 ASG7YJL170C 630 nt2.23□□□□□ -2.05
TDA11P38854 ATG10YLL042C 504 nt2.23□□□□□ -2.05
TDA11P38854 CCW14YLR390W-A 717 nt2.23□□□□□ -2.05
TDA11P38854 SRP1YNL189W 1629 nt2.23□□□□□ -2.05
TDA11P38854 HRD3YLR207W 2502 nt2.23□□□□□ -2.05
TDA11P38854 SLS1YLR139C 1932 nt2.23□□□□□ -2.05
TDA11P38854 INP51YIL002C 2841 nt2.23□□□□□ -2.05
TDA11P38854 TFC3YAL001C 3483 nt2.22□□□□□ -2.05
TDA11P38854 PUF4YGL014W 2667 nt2.22□□□□□ -2.05
TDA11P38854 YCR090CYCR090C 549 nt2.22□□□□□ -2.05
TDA11P38854 NSE4YDL105W 1209 nt2.22□□□□□ -2.05
TDA11P38854 NGG1YDR176W 2109 nt2.22□□□□□ -2.05
TDA11P38854 RAV2YDR202C 1056 nt2.22□□□□□ -2.05
TDA11P38854 YHR180W-AYHR180W-A 183 nt2.22□□□□□ -2.05
TDA11P38854 IKI1YHR187W 930 nt2.22□□□□□ -2.05
TDA11P38854 VPH2YKL119C 648 nt2.22□□□□□ -2.05
TDA11P38854 PTP3YER075C 2787 nt2.22□□□□□ -2.05
TDA11P38854 AMS1YGL156W 3252 nt2.22□□□□□ -2.05
TDA11P38854 MSB1YOR188W 3414 nt2.22□□□□□ -2.05
TDA11P38854 FUS2YMR232W 2034 nt2.22□□□□□ -2.05
TDA11P38854 MPO1YGL010W 525 nt2.21□□□□□ -2.06
TDA11P38854 RTS3YGR161C 792 nt2.21□□□□□ -2.06
TDA11P38854 YJL202CYJL202C 348 nt2.21□□□□□ -2.06
TDA11P38854 POL32YJR043C 1053 nt2.21□□□□□ -2.06
TDA11P38854 GPX1YKL026C 504 nt2.21□□□□□ -2.06
TDA11P38854 MRP49YKL167C 414 nt2.21□□□□□ -2.06
TDA11P38854 RPL16BYNL069C 597 nt2.21□□□□□ -2.06
TDA11P38854 YOL134CYOL134C 390 nt2.21□□□□□ -2.06
TDA11P38854 HEM4YOR278W 828 nt2.21□□□□□ -2.06
TDA11P38854 ORC2YBR060C 1863 nt2.21□□□□□ -2.06
TDA11P38854 CUR1YPR158W 759 nt2.21□□□□□ -2.06
TDA11P38854 UBX3YDL091C 1368 nt2.21□□□□□ -2.06
TDA11P38854 SSD1YDR293C 3753 nt2.21□□□□□ -2.06
TDA11P38854 EDS1YBR033W 2760 nt2.21□□□□□ -2.06
TDA11P38854 NEL1YHR035W 1893 nt2.2□□□□□ -2.06
TDA11P38854 PIB1YDR313C 861 nt2.2□□□□□ -2.06
TDA11P38854 SLD5YDR489W 885 nt2.2□□□□□ -2.06
TDA11P38854 GET1YGL020C 708 nt2.2□□□□□ -2.06
TDA11P38854 VMA7YGR020C 357 nt2.2□□□□□ -2.06
TDA11P38854 COX6YHR051W 447 nt2.2□□□□□ -2.06
TDA11P38854 YPT52YKR014C 705 nt2.2□□□□□ -2.06
TDA11P38854 SMD2YLR275W 333 nt2.2□□□□□ -2.06
TDA11P38854 DGR1YNL130C-A 147 nt2.2□□□□□ -2.06
TDA11P38854 UBP2YOR124C 3819 nt2.2□□□□□ -2.06
TDA11P38854 SWR1YDR334W 4545 nt2.2□□□□□ -2.06
TDA11P38854 NYV1YLR093C 762 nt2.19□□□□□ -2.06
TDA11P38854 YOL106WYOL106W 354 nt2.19□□□□□ -2.06
TDA11P38854 MFB1YDR219C 1398 nt2.19□□□□□ -2.06
TDA11P38854 SSP1YHR184W 1716 nt2.19□□□□□ -2.06
TDA11P38854 RAD18YCR066W 1464 nt2.19□□□□□ -2.06
TDA11P38854 CST9YLR394W 1449 nt2.18□□□□□ -2.06
TDA11P38854 GIS1YDR096W 2685 nt2.18□□□□□ -2.06
TDA11P38854 FUS1YCL027W 1539 nt2.18□□□□□ -2.06
TDA11P38854 ADK1YDR226W 669 nt2.18□□□□□ -2.06
TDA11P38854 TIF35YDR429C 825 nt2.18□□□□□ -2.06
TDA11P38854 PRE4YFR050C 801 nt2.18□□□□□ -2.06
TDA11P38854 GPN3YLR243W 819 nt2.18□□□□□ -2.06
TDA11P38854 IRC21YMR073C 606 nt2.18□□□□□ -2.06
TDA11P38854 CIN2YPL241C 807 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 167 ms