Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 SQS1YNL224C 2304 nt3.01□□□□□ -1.93
TY2A-FP0CX61 RPF1YHR088W 888 nt3.01□□□□□ -1.93
TY2A-FP0CX61 DAD2YKR083C 402 nt3.01□□□□□ -1.93
TY2A-FP0CX61 HRI1YLR301W 735 nt3.01□□□□□ -1.93
TY2A-FP0CX61 ATX2YOR079C 942 nt3.01□□□□□ -1.93
TY2A-FP0CX61 DRS2YAL026C 4068 nt3.01□□□□□ -1.93
TY2A-FP0CX61 CDH1YGL003C 1701 nt3.01□□□□□ -1.93
TY2A-FP0CX61 MET5YJR137C 4329 nt3□□□□□ -1.93
TY2A-FP0CX61 YJL007CYJL007C 315 nt3□□□□□ -1.93
TY2A-FP0CX61 RUF22RUF22 515 nt3□□□□□ -1.93
TY2A-FP0CX61 SPC29YPL124W 762 nt3□□□□□ -1.93
TY2A-FP0CX61 snR191snR191 274 nt3□□□□□ -1.93
TY2A-FP0CX61 TAF2YCR042C 4224 nt3□□□□□ -1.93
TY2A-FP0CX61 BOI1YBL085W 2943 nt3□□□□□ -1.93
TY2A-FP0CX61 CIN8YEL061C 3003 nt3□□□□□ -1.93
TY2A-FP0CX61 SSF2YDR312W 1362 nt3□□□□□ -1.93
TY2A-FP0CX61 YOR296WYOR296W 3870 nt2.99□□□□□ -1.93
TY2A-FP0CX61 YGL042CYGL042C 306 nt2.99□□□□□ -1.93
TY2A-FP0CX61 USE1YGL098W 738 nt2.99□□□□□ -1.93
TY2A-FP0CX61 OTU2YHL013C 924 nt2.99□□□□□ -1.93
TY2A-FP0CX61 YHR130CYHR130C 336 nt2.99□□□□□ -1.93
TY2A-FP0CX61 YKL044WYKL044W 321 nt2.99□□□□□ -1.93
TY2A-FP0CX61 MRP49YKL167C 414 nt2.99□□□□□ -1.93
TY2A-FP0CX61 SDO1YLR022C 753 nt2.99□□□□□ -1.93
TY2A-FP0CX61 YNL179CYNL179C 438 nt2.99□□□□□ -1.93
TY2A-FP0CX61 MDM1YML104C 3384 nt2.98□□□□□ -1.93
TY2A-FP0CX61 DUF1YOL087C 3351 nt2.98□□□□□ -1.93
TY2A-FP0CX61 ERG28YER044C 447 nt2.98□□□□□ -1.93
TY2A-FP0CX61 YFL019CYFL019C 354 nt2.98□□□□□ -1.93
TY2A-FP0CX61 tQ(UUG)BtQ(UUG)B 72 nt2.98□□□□□ -1.93
TY2A-FP0CX61 YAL037WYAL037W 804 nt2.98□□□□□ -1.93
TY2A-FP0CX61 YOL150CYOL150C 312 nt2.98□□□□□ -1.93
TY2A-FP0CX61 YPL205CYPL205C 345 nt2.98□□□□□ -1.93
TY2A-FP0CX61 snR42snR42 351 nt2.98□□□□□ -1.93
TY2A-FP0CX61 BFR1YOR198C 1413 nt2.98□□□□□ -1.93
TY2A-FP0CX61 CDC55YGL190C 1581 nt2.98□□□□□ -1.93
TY2A-FP0CX61 POL3YDL102W 3294 nt2.98□□□□□ -1.93
TY2A-FP0CX61 VAS1YGR094W 3315 nt2.98□□□□□ -1.93
TY2A-FP0CX61 YOR192C-AYOR192C-A 1317 nt2.97□□□□□ -1.93
TY2A-FP0CX61 SEN54YPL083C 1404 nt2.97□□□□□ -1.93
TY2A-FP0CX61 YEL030C-AYEL030C-A 315 nt2.97□□□□□ -1.93
TY2A-FP0CX61 YER107W-AYER107W-A 321 nt2.97□□□□□ -1.93
TY2A-FP0CX61 VFA1YER128W 612 nt2.97□□□□□ -1.93
TY2A-FP0CX61 RPL19BYBL027W 570 nt2.97□□□□□ -1.93
TY2A-FP0CX61 YOR073W-AYOR073W-A 234 nt2.97□□□□□ -1.93
TY2A-FP0CX61 RRG8YPR116W 834 nt2.97□□□□□ -1.93
TY2A-FP0CX61 YPR177CYPR177C 372 nt2.97□□□□□ -1.93
TY2A-FP0CX61 TRZ1YKR079C 2517 nt2.97□□□□□ -1.93
TY2A-FP0CX61 YMR018WYMR018W 1545 nt2.97□□□□□ -1.93
TY2A-FP0CX61 GDI1YER136W 1356 nt2.97□□□□□ -1.93
TY2A-FP0CX61 AI2Q0055 2565 nt2.97□□□□□ -1.93
TY2A-FP0CX61 CWC22YGR278W 1734 nt2.96□□□□□ -1.93
TY2A-FP0CX61 YSP2YDR326C 4317 nt2.96□□□□□ -1.94
TY2A-FP0CX61 VTC4YJL012C 2166 nt2.96□□□□□ -1.94
TY2A-FP0CX61 YGL063C-AYGL063C-A 150 nt2.96□□□□□ -1.94
TY2A-FP0CX61 YGR018CYGR018C 330 nt2.96□□□□□ -1.94
TY2A-FP0CX61 YKL202WYKL202W 582 nt2.96□□□□□ -1.94
TY2A-FP0CX61 PBI2YNL015W 228 nt2.96□□□□□ -1.94
TY2A-FP0CX61 HHT2YNL031C 411 nt2.96□□□□□ -1.94
TY2A-FP0CX61 GPI15YNL038W 690 nt2.96□□□□□ -1.94
TY2A-FP0CX61 YPR014CYPR014C 330 nt2.96□□□□□ -1.94
TY2A-FP0CX61 YBR209WYBR209W 318 nt2.96□□□□□ -1.94
TY2A-FP0CX61 UBP16YPL072W 1500 nt2.96□□□□□ -1.94
TY2A-FP0CX61 PSK1YAL017W 4071 nt2.96□□□□□ -1.94
TY2A-FP0CX61 CHS2YBR038W 2892 nt2.95□□□□□ -1.94
TY2A-FP0CX61 GLC3YEL011W 2115 nt2.95□□□□□ -1.94
TY2A-FP0CX61 RTR2YDR066C 591 nt2.95□□□□□ -1.94
TY2A-FP0CX61 YAP3YHL009C 993 nt2.95□□□□□ -1.94
TY2A-FP0CX61 YJR157WYJR157W 363 nt2.95□□□□□ -1.94
TY2A-FP0CX61 YAL064W-BYAL064W-B 381 nt2.95□□□□□ -1.94
TY2A-FP0CX61 YLR302CYLR302C 363 nt2.95□□□□□ -1.94
TY2A-FP0CX61 YMR294W-AYMR294W-A 360 nt2.95□□□□□ -1.94
TY2A-FP0CX61 RIO2YNL207W 1278 nt2.95□□□□□ -1.94
TY2A-FP0CX61 ARR2YPR200C 393 nt2.95□□□□□ -1.94
TY2A-FP0CX61 ASM4YDL088C 1587 nt2.95□□□□□ -1.94
TY2A-FP0CX61 POM152YMR129W 4014 nt2.95□□□□□ -1.94
TY2A-FP0CX61 PDC2YDR081C 2778 nt2.95□□□□□ -1.94
TY2A-FP0CX61 BCH1YMR237W 2175 nt2.94□□□□□ -1.94
TY2A-FP0CX61 STE6YKL209C 3873 nt2.94□□□□□ -1.94
TY2A-FP0CX61 YER039C-AYER039C-A 219 nt2.94□□□□□ -1.94
TY2A-FP0CX61 BAT1YHR208W 1182 nt2.94□□□□□ -1.94
TY2A-FP0CX61 YNL146C-AYNL146C-A 195 nt2.94□□□□□ -1.94
TY2A-FP0CX61 YPL034WYPL034W 498 nt2.94□□□□□ -1.94
TY2A-FP0CX61 FAR1YJL157C 2493 nt2.94□□□□□ -1.94
TY2A-FP0CX61 YOL057WYOL057W 2136 nt2.93□□□□□ -1.94
TY2A-FP0CX61 PAM1YDR251W 2493 nt2.93□□□□□ -1.94
TY2A-FP0CX61 YCR081C-AYCR081C-A 237 nt2.93□□□□□ -1.94
TY2A-FP0CX61 AHC2YCR082W 387 nt2.93□□□□□ -1.94
TY2A-FP0CX61 COX13YGL191W 390 nt2.93□□□□□ -1.94
TY2A-FP0CX61 YIR040CYIR040C 333 nt2.93□□□□□ -1.94
TY2A-FP0CX61 SYM1YLR251W 594 nt2.93□□□□□ -1.94
TY2A-FP0CX61 SOK1YDR006C 2706 nt2.93□□□□□ -1.94
TY2A-FP0CX61 SIP3YNL257C 3690 nt2.93□□□□□ -1.94
TY2A-FP0CX61 DSE4YNR067C 3354 nt2.92□□□□□ -1.94
TY2A-FP0CX61 SRC1YML034W 2505 nt2.92□□□□□ -1.94
TY2A-FP0CX61 YAK1YJL141C 2424 nt2.92□□□□□ -1.94
TY2A-FP0CX61 BNA7YDR428C 786 nt2.92□□□□□ -1.94
TY2A-FP0CX61 SPC1YJR010C-A 285 nt2.92□□□□□ -1.94
TY2A-FP0CX61 YLR264C-AYLR264C-A 117 nt2.92□□□□□ -1.94
TY2A-FP0CX61 YHC1YLR298C 696 nt2.92□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms