Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 SHR3YDL212W 633 nt2.09□□□□□ -2.07
SSH1P38353 RPN9YDR427W 1182 nt2.09□□□□□ -2.07
SSH1P38353 YGL218WYGL218W 651 nt2.09□□□□□ -2.07
SSH1P38353 YGL242CYGL242C 546 nt2.09□□□□□ -2.07
SSH1P38353 ERG25YGR060W 930 nt2.09□□□□□ -2.07
SSH1P38353 MVB12YGR206W 306 nt2.09□□□□□ -2.07
SSH1P38353 YGR270C-AYGR270C-A 219 nt2.09□□□□□ -2.07
SSH1P38353 YIL012WYIL012W 342 nt2.09□□□□□ -2.07
SSH1P38353 YMR181CYMR181C 465 nt2.09□□□□□ -2.07
SSH1P38353 NGL1YOL042W 1092 nt2.09□□□□□ -2.07
SSH1P38353 VAM3YOR106W 852 nt2.09□□□□□ -2.07
SSH1P38353 snR24snR24 89 nt2.09□□□□□ -2.07
SSH1P38353 NTC20YBR188C 423 nt2.09□□□□□ -2.07
SSH1P38353 DNL4YOR005C 2835 nt2.09□□□□□ -2.07
SSH1P38353 YDR034C-CYDR034C-C 1317 nt2.09□□□□□ -2.08
SSH1P38353 YLR410W-AYLR410W-A 1317 nt2.09□□□□□ -2.08
SSH1P38353 SNX41YDR425W 1878 nt2.09□□□□□ -2.08
SSH1P38353 ARK1YNL020C 1917 nt2.09□□□□□ -2.08
SSH1P38353 AGE1YDR524C 1449 nt2.08□□□□□ -2.08
SSH1P38353 NPR3YHL023C 3441 nt2.08□□□□□ -2.08
SSH1P38353 RUB1YDR139C 234 nt2.08□□□□□ -2.08
SSH1P38353 NOP19YGR251W 591 nt2.08□□□□□ -2.08
SSH1P38353 YHR022CYHR022C 771 nt2.08□□□□□ -2.08
SSH1P38353 IKI1YHR187W 930 nt2.08□□□□□ -2.08
SSH1P38353 EMC6YLL014W 327 nt2.08□□□□□ -2.08
SSH1P38353 YKE2YLR200W 345 nt2.08□□□□□ -2.08
SSH1P38353 MAK11YKL021C 1407 nt2.08□□□□□ -2.08
SSH1P38353 SYO1YDL063C 1863 nt2.07□□□□□ -2.08
SSH1P38353 SCD5YOR329C 2619 nt2.07□□□□□ -2.08
SSH1P38353 ELG1YOR144C 2376 nt2.07□□□□□ -2.08
SSH1P38353 STH1YIL126W 4080 nt2.07□□□□□ -2.08
SSH1P38353 SCP160YJL080C 3669 nt2.07□□□□□ -2.08
SSH1P38353 YER046W-AYER046W-A 330 nt2.07□□□□□ -2.08
SSH1P38353 YJL032WYJL032W 315 nt2.07□□□□□ -2.08
SSH1P38353 YIP3YNL044W 531 nt2.07□□□□□ -2.08
SSH1P38353 YOL162WYOL162W 648 nt2.07□□□□□ -2.08
SSH1P38353 snR191snR191 274 nt2.07□□□□□ -2.08
SSH1P38353 KAR4YCL055W 1008 nt2.07□□□□□ -2.08
SSH1P38353 SPT14YPL175W 1359 nt2.07□□□□□ -2.08
SSH1P38353 MSB1YOR188W 3414 nt2.07□□□□□ -2.08
SSH1P38353 RTG3YBL103C 1461 nt2.07□□□□□ -2.08
SSH1P38353 BRE5YNR051C 1548 nt2.07□□□□□ -2.08
SSH1P38353 YOL098CYOL098C 3114 nt2.06□□□□□ -2.08
SSH1P38353 DNA2YHR164C 4569 nt2.06□□□□□ -2.08
SSH1P38353 YIL068W-AYIL068W-A 384 nt2.06□□□□□ -2.08
SSH1P38353 YKL069WYKL069W 543 nt2.06□□□□□ -2.08
SSH1P38353 CMC1YKL137W 336 nt2.06□□□□□ -2.08
SSH1P38353 YLR050CYLR050C 486 nt2.06□□□□□ -2.08
SSH1P38353 AIM36YMR157C 768 nt2.06□□□□□ -2.08
SSH1P38353 YNL089CYNL089C 477 nt2.06□□□□□ -2.08
SSH1P38353 FPR1YNL135C 345 nt2.06□□□□□ -2.08
SSH1P38353 MRPL40YPL173W 894 nt2.06□□□□□ -2.08
SSH1P38353 VPS13YLL040C 9435 nt2.06□□□□□ -2.08
SSH1P38353 ESC2YDR363W 1371 nt2.06□□□□□ -2.08
SSH1P38353 COS111YBR203W 2775 nt2.06□□□□□ -2.08
SSH1P38353 MAL33YBR297W 1407 nt2.06□□□□□ -2.08
SSH1P38353 OSW7YFR039C 1533 nt2.06□□□□□ -2.08
SSH1P38353 TMN3YER113C 2121 nt2.05□□□□□ -2.08
SSH1P38353 APC11YDL008W 498 nt2.05□□□□□ -2.08
SSH1P38353 snR70snR70 164 nt2.05□□□□□ -2.08
SSH1P38353 PRE1YER012W 597 nt2.05□□□□□ -2.08
SSH1P38353 YGR018CYGR018C 330 nt2.05□□□□□ -2.08
SSH1P38353 UTP30YKR060W 825 nt2.05□□□□□ -2.08
SSH1P38353 YMR158C-AYMR158C-A 138 nt2.05□□□□□ -2.08
SSH1P38353 ATX1YNL259C 222 nt2.05□□□□□ -2.08
SSH1P38353 PET20YPL159C 762 nt2.05□□□□□ -2.08
SSH1P38353 ALG14YBR070C 714 nt2.05□□□□□ -2.08
SSH1P38353 RFC5YBR087W 1065 nt2.05□□□□□ -2.08
SSH1P38353 APA1YCL050C 966 nt2.05□□□□□ -2.08
SSH1P38353 YDR179W-AYDR179W-A 1392 nt2.05□□□□□ -2.08
SSH1P38353 JJJ2YJL162C 1752 nt2.05□□□□□ -2.08
SSH1P38353 YNL018CYNL018C 1839 nt2.05□□□□□ -2.08
SSH1P38353 SGS1YMR190C 4344 nt2.05□□□□□ -2.08
SSH1P38353 MRPL32YCR003W 552 nt2.04□□□□□ -2.08
SSH1P38353 RGA2YDR379W 3030 nt2.04□□□□□ -2.08
SSH1P38353 SLF1YDR515W 1344 nt2.04□□□□□ -2.08
SSH1P38353 YER091C-AYER091C-A 222 nt2.04□□□□□ -2.08
SSH1P38353 YMR31YFR049W 372 nt2.04□□□□□ -2.08
SSH1P38353 LSM12YHR121W 564 nt2.04□□□□□ -2.08
SSH1P38353 PDR3YBL005W 2931 nt2.04□□□□□ -2.08
SSH1P38353 AIM32YML050W 936 nt2.04□□□□□ -2.08
SSH1P38353 HSC82YMR186W 2118 nt2.04□□□□□ -2.08
SSH1P38353 KAR1YNL188W 1302 nt2.04□□□□□ -2.08
SSH1P38353 CSI2YOL007C 1026 nt2.04□□□□□ -2.08
SSH1P38353 HUA2YOR284W 732 nt2.04□□□□□ -2.08
SSH1P38353 RGL1YPL066W 1440 nt2.04□□□□□ -2.08
SSH1P38353 YRO2YBR054W 1035 nt2.04□□□□□ -2.08
SSH1P38353 CUP9YPL177C 921 nt2.04□□□□□ -2.08
SSH1P38353 APC2YLR127C 2562 nt2.04□□□□□ -2.08
SSH1P38353 MCD1YDL003W 1701 nt2.03□□□□□ -2.08
SSH1P38353 GET1YGL020C 708 nt2.03□□□□□ -2.08
SSH1P38353 RRF1YHR038W 693 nt2.03□□□□□ -2.08
SSH1P38353 YIR018C-AYIR018C-A 138 nt2.03□□□□□ -2.08
SSH1P38353 SED5YLR026C 1023 nt2.03□□□□□ -2.08
SSH1P38353 RPL36AYMR194W 303 nt2.03□□□□□ -2.08
SSH1P38353 YBL062WYBL062W 381 nt2.03□□□□□ -2.08
SSH1P38353 YOL038C-AYOL038C-A 96 nt2.03□□□□□ -2.08
SSH1P38353 PEX27YOR193W 1131 nt2.03□□□□□ -2.08
SSH1P38353 HAT1YPL001W 1125 nt2.03□□□□□ -2.08
SSH1P38353 YCT1YLL055W 1596 nt2.02□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 126.8 ms